RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 SNAP23O00161 211 aa3.95□□□□□ -1.78
SMC4-215ENST00000484799 VCYO14598 125 aa3.95□□□□□ -1.78
SMC4-215ENST00000484799 ZNF883P0CG24 379 aa3.95□□□□□ -1.78
SMC4-215ENST00000484799 CDAP32320 146 aa3.95□□□□□ -1.78
SMC4-215ENST00000484799 FASLGP48023 281 aa3.95□□□□□ -1.78
SMC4-215ENST00000484799 COL28A1Q2UY09 1125 aa3.95□□□□□ -1.78
SMC4-215ENST00000484799 PQLC2Q6ZP29 291 aa3.95□□□□□ -1.78
SMC4-215ENST00000484799 STXBP4Q6ZWJ1 553 aa3.95□□□□□ -1.78
SMC4-215ENST00000484799 ADAD2Q8NCV1 583 aaKnown RBP3.95□□□□□ -1.78
SMC4-215ENST00000484799 HMGCLL1Q8TB92 370 aa3.95□□□□□ -1.78
SMC4-215ENST00000484799 PPP4R1Q8TF05 950 aa3.95□□□□□ -1.78
SMC4-215ENST00000484799 APBB2Q92870 758 aa3.95□□□□□ -1.78
SMC4-215ENST00000484799 SMARCE1Q969G3 411 aa3.95□□□□□ -1.78
SMC4-215ENST00000484799 PABPC5Q96DU9 382 aaKnown RBP3.95□□□□□ -1.78
SMC4-215ENST00000484799 TMEM68Q96MH6 324 aa3.95□□□□□ -1.78
SMC4-215ENST00000484799 KIF9Q9HAQ2 790 aa3.95□□□□□ -1.78
SMC4-215ENST00000484799 HCFC1R1Q9NWW0 138 aa3.95□□□□□ -1.78
SMC4-215ENST00000484799 DLGAP4Q9Y2H0 992 aa3.95□□□□□ -1.78
SMC4-215ENST00000484799 C2CD2Q9Y426 696 aa3.95□□□□□ -1.78
SMC4-215ENST00000484799 FIBPO43427 364 aa3.94□□□□□ -1.78
SMC4-215ENST00000484799 CIDEAO60543 219 aa3.94□□□□□ -1.78
SMC4-215ENST00000484799 USO1O60763 962 aaKnown RBP3.94□□□□□ -1.78
SMC4-215ENST00000484799 SCGB1D1O95968 90 aa3.94□□□□□ -1.78
SMC4-215ENST00000484799 IGHV4-39P01824 125 aa3.94□□□□□ -1.78
SMC4-215ENST00000484799 HSPA1AP0DMV8 641 aaKnown RBP3.94□□□□□ -1.78
SMC4-215ENST00000484799 HSPA1BP0DMV9 641 aaKnown RBP3.94□□□□□ -1.78
SMC4-215ENST00000484799 KRT5P13647 590 aa3.94□□□□□ -1.78
SMC4-215ENST00000484799 ZNF182P17025 639 aaPredicted RBP3.94□□□□□ -1.78
SMC4-215ENST00000484799 ABCD3P28288 659 aa3.94□□□□□ -1.78
SMC4-215ENST00000484799 ABCD1P33897 745 aa3.94□□□□□ -1.78
SMC4-215ENST00000484799 CPOXP36551 454 aa3.94□□□□□ -1.78
SMC4-215ENST00000484799 ARF3P61204 181 aaPredicted RBP3.94□□□□□ -1.78
SMC4-215ENST00000484799 COG7P83436 770 aa3.94□□□□□ -1.78
SMC4-215ENST00000484799 ARF1P84077 181 aaKnown RBP3.94□□□□□ -1.78
SMC4-215ENST00000484799 GALNT2Q10471 571 aa3.94□□□□□ -1.78
SMC4-215ENST00000484799 ACVR2BQ13705 512 aa3.94□□□□□ -1.78
SMC4-215ENST00000484799 KRT32Q14532 448 aa3.94□□□□□ -1.78
SMC4-215ENST00000484799 INO80CQ6PI98 192 aaPredicted RBP3.94□□□□□ -1.78
SMC4-215ENST00000484799 TMTC3Q6ZXV5 915 aa3.94□□□□□ -1.78
SMC4-215ENST00000484799 NFKBIDQ8NI38 313 aa3.94□□□□□ -1.78
SMC4-215ENST00000484799 SLC38A5Q8WUX1 472 aa3.94□□□□□ -1.78
SMC4-215ENST00000484799 GTF3C6Q969F1 213 aa3.94□□□□□ -1.78
SMC4-215ENST00000484799 GRAMD2BQ96HH9 432 aa3.94□□□□□ -1.78
SMC4-215ENST00000484799 NUDT16L1Q9BRJ7 211 aaKnown RBP3.94□□□□□ -1.78
SMC4-215ENST00000484799 CHCHD6Q9BRQ6 235 aa3.94□□□□□ -1.78
SMC4-215ENST00000484799 SIL1Q9H173 461 aa3.94□□□□□ -1.78
SMC4-215ENST00000484799 SLC28A3Q9HAS3 691 aa3.94□□□□□ -1.78
SMC4-215ENST00000484799 ASAH2Q9NR71 780 aa3.94□□□□□ -1.78
SMC4-215ENST00000484799 SLC6A13Q9NSD5 602 aa3.94□□□□□ -1.78
SMC4-215ENST00000484799 CLIC5Q9NZA1 410 aa3.94□□□□□ -1.78
SMC4-215ENST00000484799 MARCH4Q9P2E8 410 aaPredicted RBP3.94□□□□□ -1.78
SMC4-215ENST00000484799 CAMK2AQ9UQM7 478 aa3.94□□□□□ -1.78
SMC4-215ENST00000484799 RPS6KL1Q9Y6S9 549 aa3.94□□□□□ -1.78
SMC4-215ENST00000484799 A0A1B0GU03 582 aa3.93□□□□□ -1.78
SMC4-215ENST00000484799 FSD2A1L4K1 749 aa3.93□□□□□ -1.78
SMC4-215ENST00000484799 PI4KAP2A4QPH2 592 aa3.93□□□□□ -1.78
SMC4-215ENST00000484799 PSMD14O00487 310 aa3.93□□□□□ -1.78
SMC4-215ENST00000484799 TCERG1O14776 1098 aaKnown RBP3.93□□□□□ -1.78
SMC4-215ENST00000484799 EIF3DO15371 548 aaKnown RBP eCLIP3.93□□□□□ -1.78
SMC4-215ENST00000484799 BUD23O43709 281 aaKnown RBP3.93□□□□□ -1.78
SMC4-215ENST00000484799 SEC31AO94979 1220 aaKnown RBP3.93□□□□□ -1.78
SMC4-215ENST00000484799 F9P00740 461 aa3.93□□□□□ -1.78
SMC4-215ENST00000484799 AHRP35869 848 aa3.93□□□□□ -1.78
SMC4-215ENST00000484799 CCR9P51686 369 aa3.93□□□□□ -1.78
SMC4-215ENST00000484799 EIF3BP55884 814 aaKnown RBP3.93□□□□□ -1.78
SMC4-215ENST00000484799 KCNJ10P78508 379 aa3.93□□□□□ -1.78
SMC4-215ENST00000484799 NUCB1Q02818 461 aa3.93□□□□□ -1.78
SMC4-215ENST00000484799 FGFBP1Q14512 234 aa3.93□□□□□ -1.78
SMC4-215ENST00000484799 KRT71Q3SY84 523 aa3.93□□□□□ -1.78
SMC4-215ENST00000484799 HAUS3Q68CZ6 603 aa3.93□□□□□ -1.78
SMC4-215ENST00000484799 C18orf63Q68DL7 685 aa3.93□□□□□ -1.78
SMC4-215ENST00000484799 QSOX2Q6ZRP7 698 aa3.93□□□□□ -1.78
SMC4-215ENST00000484799 R3HCC1LQ7Z5L2 792 aaKnown RBP3.93□□□□□ -1.78
SMC4-215ENST00000484799 RPAP2Q8IXW5 612 aaPredicted RBP3.93□□□□□ -1.78
SMC4-215ENST00000484799 ADSSL1Q8N142 457 aa3.93□□□□□ -1.78
SMC4-215ENST00000484799 NGEFQ8N5V2 710 aa3.93□□□□□ -1.78
SMC4-215ENST00000484799 KLHDC9Q8NEP7 349 aa3.93□□□□□ -1.78
SMC4-215ENST00000484799 TAAR8Q969N4 342 aa3.93□□□□□ -1.78
SMC4-215ENST00000484799 ZNF524Q96C55 264 aa3.93□□□□□ -1.78
SMC4-215ENST00000484799 PCYT2Q99447 389 aa3.93□□□□□ -1.78
SMC4-215ENST00000484799 CCDC68Q9H2F9 335 aa3.93□□□□□ -1.78
SMC4-215ENST00000484799 KRT84Q9NSB2 600 aa3.93□□□□□ -1.78
SMC4-215ENST00000484799 TAS2R10Q9NYW0 307 aa3.93□□□□□ -1.78
SMC4-215ENST00000484799 GREB1LQ9C091 1923 aaPredicted RBP3.92□□□□□ -1.78
SMC4-215ENST00000484799 SH2B2O14492 632 aaPredicted RBP3.92□□□□□ -1.78
SMC4-215ENST00000484799 FTCDO95954 541 aa3.92□□□□□ -1.78
SMC4-215ENST00000484799 ALOX12P18054 663 aa3.92□□□□□ -1.78
SMC4-215ENST00000484799 HOXA13P31271 388 aaPredicted RBP3.92□□□□□ -1.78
SMC4-215ENST00000484799 HOXC9P31274 260 aa3.92□□□□□ -1.78
SMC4-215ENST00000484799 ARCN1P48444 511 aaKnown RBP3.92□□□□□ -1.78
SMC4-215ENST00000484799 RARSP54136 660 aaKnown RBP3.92□□□□□ -1.78
SMC4-215ENST00000484799 KRTAP10-5P60370 271 aa3.92□□□□□ -1.78
SMC4-215ENST00000484799 SETQ01105 290 aaPredicted RBP3.92□□□□□ -1.78
SMC4-215ENST00000484799 EIF4A2Q14240 407 aaKnown RBP3.92□□□□□ -1.78
SMC4-215ENST00000484799 FCN2Q15485 313 aa3.92□□□□□ -1.78
SMC4-215ENST00000484799 DECR1Q16698 335 aa3.92□□□□□ -1.78
SMC4-215ENST00000484799 TSTQ16762 297 aaKnown RBP3.92□□□□□ -1.78
SMC4-215ENST00000484799 PRICKLE4Q2TBC4 344 aa3.92□□□□□ -1.78
SMC4-215ENST00000484799 HIST2H2BCQ6DN03 193 aa3.92□□□□□ -1.78
SMC4-215ENST00000484799 TSSK4Q6SA08 328 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms