RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 NAGLUP54802 743 aa26■■□□□ 1.75
SHOX2-204ENST00000483851 SERPINA13PQ6UXR4 307 aa26■■□□□ 1.75
SHOX2-204ENST00000483851 MACC1Q6ZN28 852 aa26■■□□□ 1.75
SHOX2-204ENST00000483851 DSG4Q86SJ6 1040 aa26■■□□□ 1.75
SHOX2-204ENST00000483851 TXNDC5Q8NBS9 432 aaKnown RBP26■■□□□ 1.75
SHOX2-204ENST00000483851 STAG3L4Q8TBR4 150 aa26■■□□□ 1.75
SHOX2-204ENST00000483851 CD200R1Q8TD46 325 aa26■■□□□ 1.75
SHOX2-204ENST00000483851 CNDP1Q96KN2 507 aa26■■□□□ 1.75
SHOX2-204ENST00000483851 ILKAPQ9H0C8 392 aaPredicted RBP26■■□□□ 1.75
SHOX2-204ENST00000483851 ALG9Q9H6U8 611 aa26■■□□□ 1.75
SHOX2-204ENST00000483851 SMOXQ9NWM0 555 aa26■■□□□ 1.75
SHOX2-204ENST00000483851 RAP2CQ9Y3L5 183 aa26■■□□□ 1.75
SHOX2-204ENST00000483851 HNRNPCL1O60812 293 aaKnown RBP26■■□□□ 1.75
SHOX2-204ENST00000483851 NIPSNAP2O75323 286 aa26■■□□□ 1.75
SHOX2-204ENST00000483851 CBX6O95503 412 aa26■■□□□ 1.75
SHOX2-204ENST00000483851 APODP05090 189 aa26■■□□□ 1.75
SHOX2-204ENST00000483851 TPBGLP0DKB5 382 aa26■■□□□ 1.75
SHOX2-204ENST00000483851 ARRB2P32121 409 aa26■■□□□ 1.75
SHOX2-204ENST00000483851 IL2P60568 153 aa26■■□□□ 1.75
SHOX2-204ENST00000483851 CRY1Q16526 586 aa26■■□□□ 1.75
SHOX2-204ENST00000483851 PTRHD1Q6GMV3 140 aaKnown RBP26■■□□□ 1.75
SHOX2-204ENST00000483851 SUSD6Q92537 303 aa26■■□□□ 1.75
SHOX2-204ENST00000483851 PPP1R16AQ96I34 528 aa26■■□□□ 1.75
SHOX2-204ENST00000483851 RAB3IPQ96QF0 476 aaPredicted RBP26■■□□□ 1.75
SHOX2-204ENST00000483851 A8MT66 165 aa25.99■■□□□ 1.75
SHOX2-204ENST00000483851 H0Y858 1186 aa25.99■■□□□ 1.75
SHOX2-204ENST00000483851 SMIM24O75264 130 aa25.99■■□□□ 1.75
SHOX2-204ENST00000483851 UGT1A6P19224 532 aa25.99■■□□□ 1.75
SHOX2-204ENST00000483851 UGT1A1P22309 533 aa25.99■■□□□ 1.75
SHOX2-204ENST00000483851 UGT1A4P22310 534 aa25.99■■□□□ 1.75
SHOX2-204ENST00000483851 UGT1A3P35503 534 aa25.99■■□□□ 1.75
SHOX2-204ENST00000483851 UGT1A5P35504 534 aa25.99■■□□□ 1.75
SHOX2-204ENST00000483851 MMP12P39900 470 aa25.99■■□□□ 1.75
SHOX2-204ENST00000483851 CLCN7P51798 805 aa25.99■■□□□ 1.75
SHOX2-204ENST00000483851 GALNT1Q10472 559 aaPredicted RBP25.99■■□□□ 1.75
SHOX2-204ENST00000483851 PRKAA1Q13131 559 aa25.99■■□□□ 1.75
SHOX2-204ENST00000483851 KIRREL3Q8IZU9 778 aa25.99■■□□□ 1.75
SHOX2-204ENST00000483851 ZNF366Q8N895 744 aa25.99■■□□□ 1.75
SHOX2-204ENST00000483851 SMRP1Q8NCR6 262 aa25.99■■□□□ 1.75
SHOX2-204ENST00000483851 ST13P5Q8NFI4 369 aaPredicted RBP25.99■■□□□ 1.75
SHOX2-204ENST00000483851 PTERQ96BW5 349 aa25.99■■□□□ 1.75
SHOX2-204ENST00000483851 UNKQ9C0B0 810 aaKnown RBP25.99■■□□□ 1.75
SHOX2-204ENST00000483851 KLHL42Q9P2K6 505 aa25.99■■□□□ 1.75
SHOX2-204ENST00000483851 BAIAP2L1Q9UHR4 511 aa25.99■■□□□ 1.75
SHOX2-204ENST00000483851 IGLV3-16A0A075B6K0 115 aa25.98■■□□□ 1.75
SHOX2-204ENST00000483851 GPR39O43194 453 aa25.98■■□□□ 1.75
SHOX2-204ENST00000483851 SERPINB3P29508 390 aa25.98■■□□□ 1.75
SHOX2-204ENST00000483851 AQP5P55064 265 aa25.98■■□□□ 1.75
SHOX2-204ENST00000483851 TRIM67Q6ZTA4 783 aa25.98■■□□□ 1.75
SHOX2-204ENST00000483851 PARS2Q7L3T8 475 aaKnown RBP25.98■■□□□ 1.75
SHOX2-204ENST00000483851 PTCD3Q96EY7 689 aaKnown RBP25.98■■□□□ 1.75
SHOX2-204ENST00000483851 COPS8Q99627 209 aa25.98■■□□□ 1.75
SHOX2-204ENST00000483851 TRMOQ9BU70 441 aa25.98■■□□□ 1.75
SHOX2-204ENST00000483851 FAM83DQ9H4H8 585 aa25.98■■□□□ 1.75
SHOX2-204ENST00000483851 LATS2Q9NRM7 1088 aa25.98■■□□□ 1.75
SHOX2-204ENST00000483851 TMCO1Q9UM00 188 aa25.98■■□□□ 1.75
SHOX2-204ENST00000483851 SLCO1B7G3V0H7 640 aa25.98■■□□□ 1.75
SHOX2-204ENST00000483851 KPNA3O00505 521 aaPredicted RBP25.98■■□□□ 1.75
SHOX2-204ENST00000483851 KERAO60938 352 aa25.98■■□□□ 1.75
SHOX2-204ENST00000483851 HNRNPLP14866 589 aaKnown RBP eCLIP25.98■■□□□ 1.75
SHOX2-204ENST00000483851 RASSF2P50749 326 aa25.98■■□□□ 1.75
SHOX2-204ENST00000483851 NAA20P61599 178 aa25.98■■□□□ 1.75
SHOX2-204ENST00000483851 SEMG2Q02383 582 aa25.98■■□□□ 1.75
SHOX2-204ENST00000483851 ELP6Q0PNE2 266 aa25.98■■□□□ 1.75
SHOX2-204ENST00000483851 RALGDSQ12967 914 aa25.98■■□□□ 1.75
SHOX2-204ENST00000483851 LRIT3Q3SXY7 679 aa25.98■■□□□ 1.75
SHOX2-204ENST00000483851 NRSN1Q8IZ57 195 aa25.98■■□□□ 1.75
SHOX2-204ENST00000483851 PIP4K2CQ8TBX8 421 aa25.98■■□□□ 1.75
SHOX2-204ENST00000483851 STON2Q8WXE9 905 aa25.98■■□□□ 1.75
SHOX2-204ENST00000483851 L3HYPDHQ96EM0 354 aa25.98■■□□□ 1.75
SHOX2-204ENST00000483851 CHFRQ96EP1 664 aa25.98■■□□□ 1.75
SHOX2-204ENST00000483851 SGF29Q96ES7 293 aa25.98■■□□□ 1.75
SHOX2-204ENST00000483851 ATOH8Q96SQ7 321 aa25.98■■□□□ 1.75
SHOX2-204ENST00000483851 SYCE1LA8MT33 242 aa25.97■■□□□ 1.75
SHOX2-204ENST00000483851 A8MUI8 341 aa25.97■■□□□ 1.75
SHOX2-204ENST00000483851 ANHXE9PGG2 379 aa25.97■■□□□ 1.75
SHOX2-204ENST00000483851 KITP10721 976 aa25.97■■□□□ 1.75
SHOX2-204ENST00000483851 IMPDH1P20839 514 aa25.97■■□□□ 1.75
SHOX2-204ENST00000483851 KRT72Q14CN4 511 aa25.97■■□□□ 1.75
SHOX2-204ENST00000483851 CFAP157Q5JU67 520 aa25.97■■□□□ 1.75
SHOX2-204ENST00000483851 ATG14Q6ZNE5 492 aa25.97■■□□□ 1.75
SHOX2-204ENST00000483851 SIDT2Q8NBJ9 832 aaKnown RBP25.97■■□□□ 1.75
SHOX2-204ENST00000483851 FAM129BQ96TA1 746 aa25.97■■□□□ 1.75
SHOX2-204ENST00000483851 TUBB6Q9BUF5 446 aa25.97■■□□□ 1.75
SHOX2-204ENST00000483851 DNAJC28Q9NX36 388 aa25.97■■□□□ 1.75
SHOX2-204ENST00000483851 MARCOQ9UEW3 520 aaPredicted RBP25.97■■□□□ 1.75
SHOX2-204ENST00000483851 LAMA3Q16787 3333 aa25.97■■□□□ 1.75
SHOX2-204ENST00000483851 TSPAN12O95859 305 aa25.96■■□□□ 1.75
SHOX2-204ENST00000483851 HLA-EP13747 358 aa25.96■■□□□ 1.75
SHOX2-204ENST00000483851 PTPN4P29074 926 aa25.96■■□□□ 1.75
SHOX2-204ENST00000483851 ENPP2Q13822 863 aa25.96■■□□□ 1.75
SHOX2-204ENST00000483851 ATP13A5Q4VNC0 1218 aa25.96■■□□□ 1.75
SHOX2-204ENST00000483851 ARL13AQ5H913 290 aaPredicted RBP25.96■■□□□ 1.75
SHOX2-204ENST00000483851 EP400NLQ6ZTU2 488 aa25.96■■□□□ 1.75
SHOX2-204ENST00000483851 HSD11B1LQ7Z5J1 315 aa25.96■■□□□ 1.75
SHOX2-204ENST00000483851 TRAM1L1Q8N609 369 aa25.96■■□□□ 1.75
SHOX2-204ENST00000483851 TBC1D10AQ9BXI6 508 aa25.96■■□□□ 1.75
SHOX2-204ENST00000483851 ARL8BQ9NVJ2 186 aa25.96■■□□□ 1.75
SHOX2-204ENST00000483851 SARDHQ9UL12 918 aa25.96■■□□□ 1.75
SHOX2-204ENST00000483851 PLXNB3Q9ULL4 1909 aa25.96■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms