RNA–Protein interactions for RNA: ENST00000482272.5

CTDSP1-208, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-208ENST00000482272 ZNF8P17098 575 aaPredicted RBP13.28□□□□□ -0.28
CTDSP1-208ENST00000482272 PTPN3P26045 913 aa13.28□□□□□ -0.28
CTDSP1-208ENST00000482272 CSF2RBP32927 897 aa13.28□□□□□ -0.28
CTDSP1-208ENST00000482272 TSPAN7P41732 249 aa13.28□□□□□ -0.28
CTDSP1-208ENST00000482272 CDKN2BP42772 138 aa13.28□□□□□ -0.28
CTDSP1-208ENST00000482272 EPHA4P54764 986 aa13.28□□□□□ -0.28
CTDSP1-208ENST00000482272 RAB15P59190 212 aa13.28□□□□□ -0.28
CTDSP1-208ENST00000482272 TAZQ16635 292 aa13.28□□□□□ -0.28
CTDSP1-208ENST00000482272 SNAP47Q5SQN1 464 aa13.28□□□□□ -0.28
CTDSP1-208ENST00000482272 ZNF648Q5T619 568 aaPredicted RBP13.28□□□□□ -0.28
CTDSP1-208ENST00000482272 ADGRG6Q86SQ4 1221 aa13.28□□□□□ -0.28
CTDSP1-208ENST00000482272 VASH2Q86V25 355 aa13.28□□□□□ -0.28
CTDSP1-208ENST00000482272 FAM129CQ86XR2 697 aa13.28□□□□□ -0.28
CTDSP1-208ENST00000482272 RCOR2Q8IZ40 523 aa13.28□□□□□ -0.28
CTDSP1-208ENST00000482272 IL22RA1Q8N6P7 574 aa13.28□□□□□ -0.28
CTDSP1-208ENST00000482272 P3H4Q92791 437 aa13.28□□□□□ -0.28
CTDSP1-208ENST00000482272 ART4Q93070 314 aa13.28□□□□□ -0.28
CTDSP1-208ENST00000482272 GLYATL1Q969I3 302 aa13.28□□□□□ -0.28
CTDSP1-208ENST00000482272 PMEPA1Q969W9 287 aa13.28□□□□□ -0.28
CTDSP1-208ENST00000482272 TEFMQ96QE5 360 aaKnown RBP13.28□□□□□ -0.28
CTDSP1-208ENST00000482272 VAT1Q99536 393 aa13.28□□□□□ -0.28
CTDSP1-208ENST00000482272 SEMA4CQ9C0C4 833 aa13.28□□□□□ -0.28
CTDSP1-208ENST00000482272 EPB41L1Q9H4G0 881 aa13.28□□□□□ -0.28
CTDSP1-208ENST00000482272 ARFGAP3Q9NP61 516 aa13.28□□□□□ -0.28
CTDSP1-208ENST00000482272 PRDM8Q9NQV8 689 aa13.28□□□□□ -0.28
CTDSP1-208ENST00000482272 OCIAD1Q9NX40 245 aa13.28□□□□□ -0.28
CTDSP1-208ENST00000482272 TMEM9Q9P0T7 183 aa13.28□□□□□ -0.28
CTDSP1-208ENST00000482272 NFKBIL1Q9UBC1 381 aaPredicted RBP13.28□□□□□ -0.28
CTDSP1-208ENST00000482272 CPNE7Q9UBL6 633 aa13.28□□□□□ -0.28
CTDSP1-208ENST00000482272 FAM153AQ9UHL3 310 aa13.28□□□□□ -0.28
CTDSP1-208ENST00000482272 B3GALT1Q9Y5Z6 326 aa13.28□□□□□ -0.28
CTDSP1-208ENST00000482272 A6NCN8 305 aa13.27□□□□□ -0.29
CTDSP1-208ENST00000482272 CHUKO15111 745 aa13.27□□□□□ -0.29
CTDSP1-208ENST00000482272 PSTPIP1O43586 416 aa13.27□□□□□ -0.29
CTDSP1-208ENST00000482272 CDK14O94921 469 aa13.27□□□□□ -0.29
CTDSP1-208ENST00000482272 ZRANB2O95218 330 aaKnown RBP eCLIP13.27□□□□□ -0.29
CTDSP1-208ENST00000482272 VIPP01282 170 aa13.27□□□□□ -0.29
CTDSP1-208ENST00000482272 SFTPCP11686 197 aa13.27□□□□□ -0.29
CTDSP1-208ENST00000482272 XRCC1P18887 633 aaPredicted RBP13.27□□□□□ -0.29
CTDSP1-208ENST00000482272 CD68P34810 354 aaPredicted RBP13.27□□□□□ -0.29
CTDSP1-208ENST00000482272 MAPK9P45984 424 aa13.27□□□□□ -0.29
CTDSP1-208ENST00000482272 ARSDP51689 593 aa13.27□□□□□ -0.29
CTDSP1-208ENST00000482272 HADHBP55084 474 aaKnown RBP13.27□□□□□ -0.29
CTDSP1-208ENST00000482272 PRKD1Q15139 912 aaPredicted RBP13.27□□□□□ -0.29
CTDSP1-208ENST00000482272 NOMO1Q15155 1222 aa13.27□□□□□ -0.29
CTDSP1-208ENST00000482272 INSCQ1MX18 579 aa13.27□□□□□ -0.29
CTDSP1-208ENST00000482272 LINC00303Q3SY05 128 aa13.27□□□□□ -0.29
CTDSP1-208ENST00000482272 TFDP3Q5H9I0 405 aa13.27□□□□□ -0.29
CTDSP1-208ENST00000482272 KAZNQ674X7 775 aa13.27□□□□□ -0.29
CTDSP1-208ENST00000482272 SPOCD1Q6ZMY3 1216 aa13.27□□□□□ -0.29
CTDSP1-208ENST00000482272 PID1Q7Z2X4 250 aa13.27□□□□□ -0.29
CTDSP1-208ENST00000482272 ARHGAP22Q7Z5H3 698 aa13.27□□□□□ -0.29
CTDSP1-208ENST00000482272 LRRTM4Q86VH4 590 aa13.27□□□□□ -0.29
CTDSP1-208ENST00000482272 BRSK1Q8TDC3 778 aa13.27□□□□□ -0.29
CTDSP1-208ENST00000482272 JPH3Q8WXH2 748 aaPredicted RBP13.27□□□□□ -0.29
CTDSP1-208ENST00000482272 NKD1Q969G9 470 aa13.27□□□□□ -0.29
CTDSP1-208ENST00000482272 PLEKHG4BQ96PX9 1271 aa13.27□□□□□ -0.29
CTDSP1-208ENST00000482272 OSGEPL1Q9H4B0 414 aa13.27□□□□□ -0.29
CTDSP1-208ENST00000482272 TRABDQ9H4I3 376 aa13.27□□□□□ -0.29
CTDSP1-208ENST00000482272 UBP1Q9NZI7 540 aa13.27□□□□□ -0.29
CTDSP1-208ENST00000482272 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.27□□□□□ -0.29
CTDSP1-208ENST00000482272 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.27□□□□□ -0.29
CTDSP1-208ENST00000482272 PCDHGA4Q9Y5G9 962 aa13.27□□□□□ -0.29
CTDSP1-208ENST00000482272 ADGRG1Q9Y653 693 aa13.27□□□□□ -0.29
CTDSP1-208ENST00000482272 KALRNO60229 2985 aa13.26□□□□□ -0.29
CTDSP1-208ENST00000482272 RCCD1A6NED2 376 aa13.26□□□□□ -0.29
CTDSP1-208ENST00000482272 J3QKU1 62 aa13.26□□□□□ -0.29
CTDSP1-208ENST00000482272 AURKAO14965 403 aa13.26□□□□□ -0.29
CTDSP1-208ENST00000482272 VEGFDO43915 354 aa13.26□□□□□ -0.29
CTDSP1-208ENST00000482272 EPOP01588 193 aa13.26□□□□□ -0.29
CTDSP1-208ENST00000482272 ZNF7P17097 686 aaPredicted RBP13.26□□□□□ -0.29
CTDSP1-208ENST00000482272 BPIP17213 487 aa13.26□□□□□ -0.29
CTDSP1-208ENST00000482272 IDSP22304 550 aa13.26□□□□□ -0.29
CTDSP1-208ENST00000482272 CA5AP35218 305 aa13.26□□□□□ -0.29
CTDSP1-208ENST00000482272 UGT1A3P35503 534 aa13.26□□□□□ -0.29
CTDSP1-208ENST00000482272 HMGCLP35914 325 aa13.26□□□□□ -0.29
CTDSP1-208ENST00000482272 MC2RQ01718 297 aa13.26□□□□□ -0.29
CTDSP1-208ENST00000482272 WASHC5Q12768 1159 aa13.26□□□□□ -0.29
CTDSP1-208ENST00000482272 TMEM115Q12893 351 aaPredicted RBP13.26□□□□□ -0.29
CTDSP1-208ENST00000482272 GTF2H3Q13889 308 aa13.26□□□□□ -0.29
CTDSP1-208ENST00000482272 SPA17Q15506 151 aa13.26□□□□□ -0.29
CTDSP1-208ENST00000482272 ZDHHC20Q5W0Z9 365 aa13.26□□□□□ -0.29
CTDSP1-208ENST00000482272 CRTC3Q6UUV7 619 aa13.26□□□□□ -0.29
CTDSP1-208ENST00000482272 CEACAM20Q6UY09 585 aa13.26□□□□□ -0.29
CTDSP1-208ENST00000482272 ZC3H18Q86VM9 953 aaKnown RBP13.26□□□□□ -0.29
CTDSP1-208ENST00000482272 PLXDC1Q8IUK5 500 aa13.26□□□□□ -0.29
CTDSP1-208ENST00000482272 CCDC50Q8IVM0 306 aa13.26□□□□□ -0.29
CTDSP1-208ENST00000482272 TRIM48Q8IWZ4 208 aa13.26□□□□□ -0.29
CTDSP1-208ENST00000482272 GDAP1Q8TB36 358 aa13.26□□□□□ -0.29
CTDSP1-208ENST00000482272 EXTL1Q92935 676 aa13.26□□□□□ -0.29
CTDSP1-208ENST00000482272 TTC25Q96NG3 672 aa13.26□□□□□ -0.29
CTDSP1-208ENST00000482272 VPS35Q96QK1 796 aa13.26□□□□□ -0.29
CTDSP1-208ENST00000482272 ZPBPQ9BS86 351 aa13.26□□□□□ -0.29
CTDSP1-208ENST00000482272 TRIM5Q9C035 493 aa13.26□□□□□ -0.29
CTDSP1-208ENST00000482272 UCK1Q9HA47 277 aa13.26□□□□□ -0.29
CTDSP1-208ENST00000482272 BPIFA1Q9NP55 256 aa13.26□□□□□ -0.29
CTDSP1-208ENST00000482272 LUC7LQ9NQ29 371 aaKnown RBP13.26□□□□□ -0.29
CTDSP1-208ENST00000482272 FBXO8Q9NRD0 319 aa13.26□□□□□ -0.29
CTDSP1-208ENST00000482272 KLHL8Q9P2G9 620 aaPredicted RBP13.26□□□□□ -0.29
CTDSP1-208ENST00000482272 TMPRSS11EQ9UL52 423 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms