RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 ZCCHC2Q9C0B9 1178 aaKnown RBP11.74□□□□□ -0.53
HMGN1-213ENST00000482192 STN1Q9H668 368 aaKnown RBP11.74□□□□□ -0.53
HMGN1-213ENST00000482192 ASCL3Q9NQ33 180 aa11.74□□□□□ -0.53
HMGN1-213ENST00000482192 LZTFL1Q9NQ48 299 aa11.74□□□□□ -0.53
HMGN1-213ENST00000482192 TBC1D29Q9UFV1 150 aa11.74□□□□□ -0.53
HMGN1-213ENST00000482192 FEZ2Q9UHY8 353 aaPredicted RBP11.74□□□□□ -0.53
HMGN1-213ENST00000482192 TMPRSS11EQ9UL52 423 aa11.74□□□□□ -0.53
HMGN1-213ENST00000482192 ATXN7L1Q9ULK2 861 aaPredicted RBP11.74□□□□□ -0.53
HMGN1-213ENST00000482192 LHX6Q9UPM6 363 aa11.74□□□□□ -0.53
HMGN1-213ENST00000482192 R3HDM2Q9Y2K5 976 aaKnown RBP11.74□□□□□ -0.53
HMGN1-213ENST00000482192 MYLKQ15746 1914 aa11.74□□□□□ -0.53
HMGN1-213ENST00000482192 KIR2DS5A0A0G2JLQ3 304 aa11.73□□□□□ -0.53
HMGN1-213ENST00000482192 A0A0G2JNG1 304 aa11.73□□□□□ -0.53
HMGN1-213ENST00000482192 TCRBV7S2A1N4TA0A589 114 aa11.73□□□□□ -0.53
HMGN1-213ENST00000482192 A6NCN8 305 aa11.73□□□□□ -0.53
HMGN1-213ENST00000482192 KIR2DS3K7RE56 304 aa11.73□□□□□ -0.53
HMGN1-213ENST00000482192 PLD2O14939 933 aa11.73□□□□□ -0.53
HMGN1-213ENST00000482192 KMOO15229 486 aa11.73□□□□□ -0.53
HMGN1-213ENST00000482192 PPM1DO15297 605 aa11.73□□□□□ -0.53
HMGN1-213ENST00000482192 BUD23O43709 281 aaKnown RBP11.73□□□□□ -0.53
HMGN1-213ENST00000482192 SNX2O60749 519 aa11.73□□□□□ -0.53
HMGN1-213ENST00000482192 MTX2O75431 263 aa11.73□□□□□ -0.53
HMGN1-213ENST00000482192 PRAMEF1O95521 474 aa11.73□□□□□ -0.53
HMGN1-213ENST00000482192 CRTAMO95727 393 aa11.73□□□□□ -0.53
HMGN1-213ENST00000482192 EML2O95834 649 aa11.73□□□□□ -0.53
HMGN1-213ENST00000482192 ITGA2BP08514 1039 aa11.73□□□□□ -0.53
HMGN1-213ENST00000482192 LPOP22079 712 aaPredicted RBP11.73□□□□□ -0.53
HMGN1-213ENST00000482192 ABCG1P45844 678 aa11.73□□□□□ -0.53
HMGN1-213ENST00000482192 PDE1BQ01064 536 aa11.73□□□□□ -0.53
HMGN1-213ENST00000482192 HHEXQ03014 270 aa11.73□□□□□ -0.53
HMGN1-213ENST00000482192 ZFP36L1Q07352 338 aaKnown RBP11.73□□□□□ -0.53
HMGN1-213ENST00000482192 GTF2H3Q13889 308 aa11.73□□□□□ -0.53
HMGN1-213ENST00000482192 KIR2DS5Q14953 304 aa11.73□□□□□ -0.53
HMGN1-213ENST00000482192 RPS6KA1Q15418 735 aa11.73□□□□□ -0.53
HMGN1-213ENST00000482192 CHRNA6Q15825 494 aa11.73□□□□□ -0.53
HMGN1-213ENST00000482192 INSCQ1MX18 579 aa11.73□□□□□ -0.53
HMGN1-213ENST00000482192 COL28A1Q2UY09 1125 aa11.73□□□□□ -0.53
HMGN1-213ENST00000482192 AMZ1Q400G9 498 aa11.73□□□□□ -0.53
HMGN1-213ENST00000482192 KHDC1Q4VXA5 237 aaKnown RBP11.73□□□□□ -0.53
HMGN1-213ENST00000482192 LDLRAP1Q5SW96 308 aa11.73□□□□□ -0.53
HMGN1-213ENST00000482192 MEI1Q5TIA1 1274 aa11.73□□□□□ -0.53
HMGN1-213ENST00000482192 IYDQ6PHW0 289 aa11.73□□□□□ -0.53
HMGN1-213ENST00000482192 C19orf48Q6RUI8 117 aa11.73□□□□□ -0.53
HMGN1-213ENST00000482192 RAB11FIP2Q7L804 512 aa11.73□□□□□ -0.53
HMGN1-213ENST00000482192 SLITRK4Q8IW52 837 aa11.73□□□□□ -0.53
HMGN1-213ENST00000482192 KLHDC8BQ8IXV7 354 aa11.73□□□□□ -0.53
HMGN1-213ENST00000482192 AVL9Q8NBF6 648 aa11.73□□□□□ -0.53
HMGN1-213ENST00000482192 DDHD1Q8NEL9 900 aa11.73□□□□□ -0.53
HMGN1-213ENST00000482192 SH3KBP1Q96B97 665 aa11.73□□□□□ -0.53
HMGN1-213ENST00000482192 PRR11Q96HE9 360 aaPredicted RBP11.73□□□□□ -0.53
HMGN1-213ENST00000482192 TTC25Q96NG3 672 aa11.73□□□□□ -0.53
HMGN1-213ENST00000482192 SLC38A3Q99624 504 aa11.73□□□□□ -0.53
HMGN1-213ENST00000482192 TBL1YQ9BQ87 522 aa11.73□□□□□ -0.53
HMGN1-213ENST00000482192 TIMM29Q9BSF4 260 aa11.73□□□□□ -0.53
HMGN1-213ENST00000482192 TMEM121Q9BTD3 319 aa11.73□□□□□ -0.53
HMGN1-213ENST00000482192 OSGEPL1Q9H4B0 414 aa11.73□□□□□ -0.53
HMGN1-213ENST00000482192 RDH14Q9HBH5 336 aa11.73□□□□□ -0.53
HMGN1-213ENST00000482192 ARNT2Q9HBZ2 717 aa11.73□□□□□ -0.53
HMGN1-213ENST00000482192 SARS2Q9NP81 518 aaKnown RBP11.73□□□□□ -0.53
HMGN1-213ENST00000482192 KLC4Q9NSK0 619 aa11.73□□□□□ -0.53
HMGN1-213ENST00000482192 SMOXQ9NWM0 555 aa11.73□□□□□ -0.53
HMGN1-213ENST00000482192 KCNK4Q9NYG8 393 aa11.73□□□□□ -0.53
HMGN1-213ENST00000482192 ARL5AQ9Y689 179 aa11.73□□□□□ -0.53
HMGN1-213ENST00000482192 TRBV23OR9-2A0A075B6M9 112 aa11.72□□□□□ -0.53
HMGN1-213ENST00000482192 IGHV1OR21-1A0A087WYE8 117 aa11.72□□□□□ -0.53
HMGN1-213ENST00000482192 PMS2P1A4D2B8 440 aa11.72□□□□□ -0.53
HMGN1-213ENST00000482192 OR5K4A6NMS3 321 aa11.72□□□□□ -0.53
HMGN1-213ENST00000482192 CDRT15L2A8MXV6 281 aa11.72□□□□□ -0.53
HMGN1-213ENST00000482192 LIASO43766 372 aa11.72□□□□□ -0.53
HMGN1-213ENST00000482192 TNFSF15O95150 251 aa11.72□□□□□ -0.53
HMGN1-213ENST00000482192 ZNF7P17097 686 aaPredicted RBP11.72□□□□□ -0.53
HMGN1-213ENST00000482192 VCLP18206 1134 aa11.72□□□□□ -0.53
HMGN1-213ENST00000482192 CD1CP29017 333 aa11.72□□□□□ -0.53
HMGN1-213ENST00000482192 STIP1P31948 543 aaKnown RBP11.72□□□□□ -0.53
HMGN1-213ENST00000482192 GDF10P55107 478 aa11.72□□□□□ -0.53
HMGN1-213ENST00000482192 GPLD1P80108 840 aa11.72□□□□□ -0.53
HMGN1-213ENST00000482192 CCZ1BP86790 482 aa11.72□□□□□ -0.53
HMGN1-213ENST00000482192 CCZ1P86791 482 aaPredicted RBP11.72□□□□□ -0.53
HMGN1-213ENST00000482192 TMEM115Q12893 351 aaPredicted RBP11.72□□□□□ -0.53
HMGN1-213ENST00000482192 SQSTM1Q13501 440 aa11.72□□□□□ -0.53
HMGN1-213ENST00000482192 OLIG2Q13516 323 aa11.72□□□□□ -0.53
HMGN1-213ENST00000482192 SPARCL1Q14515 664 aa11.72□□□□□ -0.53
HMGN1-213ENST00000482192 PTPRCAPQ14761 206 aa11.72□□□□□ -0.53
HMGN1-213ENST00000482192 PLA2G4EQ3MJ16 856 aa11.72□□□□□ -0.53
HMGN1-213ENST00000482192 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.72□□□□□ -0.53
HMGN1-213ENST00000482192 PHF19Q5T6S3 580 aa11.72□□□□□ -0.53
HMGN1-213ENST00000482192 KCTD11Q693B1 232 aa11.72□□□□□ -0.53
HMGN1-213ENST00000482192 DENND5AQ6IQ26 1287 aa11.72□□□□□ -0.53
HMGN1-213ENST00000482192 USP53Q70EK8 1073 aa11.72□□□□□ -0.53
HMGN1-213ENST00000482192 SLC9B2Q86UD5 537 aa11.72□□□□□ -0.53
HMGN1-213ENST00000482192 SLC13A5Q86YT5 568 aaPredicted RBP11.72□□□□□ -0.53
HMGN1-213ENST00000482192 TRAPPC5Q8IUR0 188 aa11.72□□□□□ -0.53
HMGN1-213ENST00000482192 ZNF547Q8IVP9 402 aa11.72□□□□□ -0.53
HMGN1-213ENST00000482192 FBXO39Q8N4B4 442 aa11.72□□□□□ -0.53
HMGN1-213ENST00000482192 OR4K2Q8NGD2 314 aa11.72□□□□□ -0.53
HMGN1-213ENST00000482192 OR10G6Q8NH81 332 aa11.72□□□□□ -0.53
HMGN1-213ENST00000482192 ATG4AQ8WYN0 398 aa11.72□□□□□ -0.53
HMGN1-213ENST00000482192 RTP4Q96DX8 246 aa11.72□□□□□ -0.53
HMGN1-213ENST00000482192 CMKLR1Q99788 373 aa11.72□□□□□ -0.53
HMGN1-213ENST00000482192 DPYSL5Q9BPU6 564 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms