RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 FBXL2Q9UKC9 423 aa5.61□□□□□ -1.51
SF3B1-210ENST00000482158 B3GALT5Q9Y2C3 310 aa5.61□□□□□ -1.51
SF3B1-210ENST00000482158 LRRC72A6NJI9 287 aa5.6□□□□□ -1.51
SF3B1-210ENST00000482158 GLOD5A6NK44 160 aa5.6□□□□□ -1.51
SF3B1-210ENST00000482158 ZNF217O75362 1048 aa5.6□□□□□ -1.51
SF3B1-210ENST00000482158 PPP1R3DO95685 299 aa5.6□□□□□ -1.51
SF3B1-210ENST00000482158 PMS2P2O95744 297 aa5.6□□□□□ -1.51
SF3B1-210ENST00000482158 AFPP02771 609 aaKnown RBP5.6□□□□□ -1.51
SF3B1-210ENST00000482158 SAT1P21673 171 aa5.6□□□□□ -1.51
SF3B1-210ENST00000482158 HRH2P25021 359 aa5.6□□□□□ -1.51
SF3B1-210ENST00000482158 RRP1P56182 461 aaKnown RBP5.6□□□□□ -1.51
SF3B1-210ENST00000482158 GRAPQ13588 217 aa5.6□□□□□ -1.51
SF3B1-210ENST00000482158 CALCRLQ16602 461 aa5.6□□□□□ -1.51
SF3B1-210ENST00000482158 BMP2KLQ5H9B9 411 aa5.6□□□□□ -1.51
SF3B1-210ENST00000482158 KRT79Q5XKE5 535 aa5.6□□□□□ -1.51
SF3B1-210ENST00000482158 CCNI2Q6ZMN8 369 aaPredicted RBP5.6□□□□□ -1.51
SF3B1-210ENST00000482158 KRBA2Q6ZNG9 492 aa5.6□□□□□ -1.51
SF3B1-210ENST00000482158 PRPF39Q86UA1 669 aaKnown RBP5.6□□□□□ -1.51
SF3B1-210ENST00000482158 C1orf87Q8N0U7 546 aa5.6□□□□□ -1.51
SF3B1-210ENST00000482158 SNRNP27Q8WVK2 155 aaKnown RBP5.6□□□□□ -1.51
SF3B1-210ENST00000482158 SLC44A1Q8WWI5 657 aa5.6□□□□□ -1.51
SF3B1-210ENST00000482158 ABTB1Q969K4 478 aaPredicted RBP5.6□□□□□ -1.51
SF3B1-210ENST00000482158 DACH2Q96NX9 599 aa5.6□□□□□ -1.51
SF3B1-210ENST00000482158 SMC6Q96SB8 1091 aa5.6□□□□□ -1.51
SF3B1-210ENST00000482158 TMEM204Q9BSN7 226 aa5.6□□□□□ -1.51
SF3B1-210ENST00000482158 TMEM30AQ9NV96 361 aa5.6□□□□□ -1.51
SF3B1-210ENST00000482158 ZNF224Q9NZL3 707 aa5.6□□□□□ -1.51
SF3B1-210ENST00000482158 SIX4Q9UIU6 781 aa5.6□□□□□ -1.51
SF3B1-210ENST00000482158 KLHL20Q9Y2M5 609 aa5.6□□□□□ -1.51
SF3B1-210ENST00000482158 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.6□□□□□ -1.51
SF3B1-210ENST00000482158 PTPRCP08575 1304 aa5.59□□□□□ -1.51
SF3B1-210ENST00000482158 ZNF644Q9H582 1327 aaPredicted RBP5.59□□□□□ -1.51
SF3B1-210ENST00000482158 LOC102723996A0A087X1L8 192 aa5.59□□□□□ -1.51
SF3B1-210ENST00000482158 INSIG1O15503 277 aa5.59□□□□□ -1.51
SF3B1-210ENST00000482158 RSL1D1O76021 490 aaKnown RBP5.59□□□□□ -1.51
SF3B1-210ENST00000482158 TNFRSF8P28908 595 aa5.59□□□□□ -1.51
SF3B1-210ENST00000482158 DSCR9P59020 149 aa5.59□□□□□ -1.51
SF3B1-210ENST00000482158 PPP2R2BQ00005 443 aa5.59□□□□□ -1.51
SF3B1-210ENST00000482158 RUNX1T1Q06455 604 aa5.59□□□□□ -1.51
SF3B1-210ENST00000482158 SLC20A2Q08357 652 aa5.59□□□□□ -1.51
SF3B1-210ENST00000482158 MVPQ14764 893 aaKnown RBP5.59□□□□□ -1.51
SF3B1-210ENST00000482158 RAB6CQ53S08 254 aa5.59□□□□□ -1.51
SF3B1-210ENST00000482158 RBM23Q86U06 439 aaKnown RBP5.59□□□□□ -1.51
SF3B1-210ENST00000482158 SPATA2LQ8IUW3 424 aaPredicted RBP5.59□□□□□ -1.51
SF3B1-210ENST00000482158 SAMD14Q8IZD0 417 aaPredicted RBP5.59□□□□□ -1.51
SF3B1-210ENST00000482158 GSDMBQ8TAX9 411 aa5.59□□□□□ -1.51
SF3B1-210ENST00000482158 PTPMT1Q8WUK0 201 aaPredicted RBP5.59□□□□□ -1.51
SF3B1-210ENST00000482158 SLC20A1Q8WUM9 679 aa5.59□□□□□ -1.51
SF3B1-210ENST00000482158 MTBPQ96DY7 904 aa5.59□□□□□ -1.51
SF3B1-210ENST00000482158 GCNAQ96QF7 691 aa5.59□□□□□ -1.51
SF3B1-210ENST00000482158 OR1F2PQ96R84 312 aa5.59□□□□□ -1.51
SF3B1-210ENST00000482158 WACQ9BTA9 647 aa5.59□□□□□ -1.51
SF3B1-210ENST00000482158 KIFC3Q9BVG8 833 aa5.59□□□□□ -1.51
SF3B1-210ENST00000482158 RAB6CQ9H0N0 254 aa5.59□□□□□ -1.51
SF3B1-210ENST00000482158 DNAJC18Q9H819 358 aa5.59□□□□□ -1.51
SF3B1-210ENST00000482158 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.59□□□□□ -1.51
SF3B1-210ENST00000482158 DBNLQ9UJU6 430 aaKnown RBP5.59□□□□□ -1.51
SF3B1-210ENST00000482158 KCNS2Q9ULS6 477 aa5.59□□□□□ -1.51
SF3B1-210ENST00000482158 MAGED1Q9Y5V3 778 aaPredicted RBP5.59□□□□□ -1.51
SF3B1-210ENST00000482158 PRAG1Q86YV5 1406 aa5.58□□□□□ -1.52
SF3B1-210ENST00000482158 PROB1E7EW31 1015 aa5.58□□□□□ -1.52
SF3B1-210ENST00000482158 HS3ST1O14792 307 aa5.58□□□□□ -1.52
SF3B1-210ENST00000482158 PLOD3O60568 738 aa5.58□□□□□ -1.52
SF3B1-210ENST00000482158 AVILO75366 819 aa5.58□□□□□ -1.52
SF3B1-210ENST00000482158 KRT20P35900 424 aa5.58□□□□□ -1.52
SF3B1-210ENST00000482158 STAT2P52630 851 aa5.58□□□□□ -1.52
SF3B1-210ENST00000482158 TMF1P82094 1093 aa5.58□□□□□ -1.52
SF3B1-210ENST00000482158 PDE1BQ01064 536 aa5.58□□□□□ -1.52
SF3B1-210ENST00000482158 BAATQ14032 418 aaPredicted RBP5.58□□□□□ -1.52
SF3B1-210ENST00000482158 IGSF11Q5DX21 431 aa5.58□□□□□ -1.52
SF3B1-210ENST00000482158 MFSD4BQ5TF39 518 aa5.58□□□□□ -1.52
SF3B1-210ENST00000482158 GFRALQ6UXV0 394 aa5.58□□□□□ -1.52
SF3B1-210ENST00000482158 TPRG1Q6ZUI0 275 aa5.58□□□□□ -1.52
SF3B1-210ENST00000482158 Q75L30 129 aa5.58□□□□□ -1.52
SF3B1-210ENST00000482158 DNAAF5Q86Y56 855 aa5.58□□□□□ -1.52
SF3B1-210ENST00000482158 ODF3L1Q8IXM7 274 aa5.58□□□□□ -1.52
SF3B1-210ENST00000482158 EMC1Q8N766 993 aa5.58□□□□□ -1.52
SF3B1-210ENST00000482158 LILRB1Q8NHL6 650 aaPredicted RBP5.58□□□□□ -1.52
SF3B1-210ENST00000482158 THAP6Q8TBB0 222 aa5.58□□□□□ -1.52
SF3B1-210ENST00000482158 TMCO6Q96DC7 493 aa5.58□□□□□ -1.52
SF3B1-210ENST00000482158 LYZL4Q96KX0 146 aa5.58□□□□□ -1.52
SF3B1-210ENST00000482158 SEMA3CQ99985 751 aa5.58□□□□□ -1.52
SF3B1-210ENST00000482158 ZPBPQ9BS86 351 aa5.58□□□□□ -1.52
SF3B1-210ENST00000482158 OSGEPL1Q9H4B0 414 aa5.58□□□□□ -1.52
SF3B1-210ENST00000482158 MORF4L1Q9UBU8 362 aa5.58□□□□□ -1.52
SF3B1-210ENST00000482158 RPS6KL1Q9Y6S9 549 aa5.58□□□□□ -1.52
SF3B1-210ENST00000482158 FAM169AQ9Y6X4 670 aa5.58□□□□□ -1.52
SF3B1-210ENST00000482158 J3QR06 171 aa5.57□□□□□ -1.52
SF3B1-210ENST00000482158 WISP2O76076 250 aa5.57□□□□□ -1.52
SF3B1-210ENST00000482158 CSPG5O95196 566 aa5.57□□□□□ -1.52
SF3B1-210ENST00000482158 ZBTB11O95625 1053 aaPredicted RBP5.57□□□□□ -1.52
SF3B1-210ENST00000482158 GH2P01242 217 aa5.57□□□□□ -1.52
SF3B1-210ENST00000482158 DNTTP04053 509 aa5.57□□□□□ -1.52
SF3B1-210ENST00000482158 HLA-DOBP13765 273 aa5.57□□□□□ -1.52
SF3B1-210ENST00000482158 MYOD1P15172 320 aa5.57□□□□□ -1.52
SF3B1-210ENST00000482158 TMPOP42166 694 aaKnown RBP5.57□□□□□ -1.52
SF3B1-210ENST00000482158 PEX5P50542 639 aa5.57□□□□□ -1.52
SF3B1-210ENST00000482158 TNFAIP1Q13829 316 aa5.57□□□□□ -1.52
SF3B1-210ENST00000482158 SF3B4Q15427 424 aaKnown RBP eCLIP5.57□□□□□ -1.522e-7■■■■■ 32.9
SF3B1-210ENST00000482158 FAM122CQ6P4D5 195 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms