RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 TC2NQ8N9U0 490 aa18.33■□□□□ 0.52
CLK1-211ENST00000481641 TFB1MQ8WVM0 346 aaKnown RBP18.33■□□□□ 0.52
CLK1-211ENST00000481641 EXTL1Q92935 676 aa18.33■□□□□ 0.52
CLK1-211ENST00000481641 GLYATL1Q969I3 302 aa18.33■□□□□ 0.52
CLK1-211ENST00000481641 ZSCAN5AQ9BUG6 496 aa18.33■□□□□ 0.52
CLK1-211ENST00000481641 TBC1D10AQ9BXI6 508 aa18.33■□□□□ 0.52
CLK1-211ENST00000481641 OSGEPL1Q9H4B0 414 aa18.33■□□□□ 0.52
CLK1-211ENST00000481641 TRIM39Q9HCM9 518 aa18.33■□□□□ 0.52
CLK1-211ENST00000481641 SLC39A1Q9NY26 324 aa18.33■□□□□ 0.52
CLK1-211ENST00000481641 SCHIP1Q9P0W5 487 aaPredicted RBP18.33■□□□□ 0.52
CLK1-211ENST00000481641 TMPRSS11EQ9UL52 423 aa18.33■□□□□ 0.52
CLK1-211ENST00000481641 PCDHGA4Q9Y5G9 962 aa18.33■□□□□ 0.52
CLK1-211ENST00000481641 NFKB1P19838 968 aa18.32■□□□□ 0.52
CLK1-211ENST00000481641 CD82P27701 267 aa18.32■□□□□ 0.52
CLK1-211ENST00000481641 NR2C2P49116 596 aa18.32■□□□□ 0.52
CLK1-211ENST00000481641 DCDC1P59894 354 aa18.32■□□□□ 0.52
CLK1-211ENST00000481641 TFDP2Q14188 446 aa18.32■□□□□ 0.52
CLK1-211ENST00000481641 SLC9B2Q86UD5 537 aa18.32■□□□□ 0.52
CLK1-211ENST00000481641 SLC25A41Q8N5S1 370 aa18.32■□□□□ 0.52
CLK1-211ENST00000481641 MED8Q96G25 268 aa18.32■□□□□ 0.52
CLK1-211ENST00000481641 DPYSL5Q9BPU6 564 aa18.32■□□□□ 0.52
CLK1-211ENST00000481641 HERPUD2Q9BSE4 406 aa18.32■□□□□ 0.52
CLK1-211ENST00000481641 B3GNT4Q9C0J1 378 aa18.32■□□□□ 0.52
CLK1-211ENST00000481641 PDP2Q9P2J9 529 aa18.32■□□□□ 0.52
CLK1-211ENST00000481641 CPNE7Q9UBL6 633 aa18.32■□□□□ 0.52
CLK1-211ENST00000481641 KLHL3Q9UH77 587 aa18.32■□□□□ 0.52
CLK1-211ENST00000481641 DNAJC16Q9Y2G8 782 aa18.32■□□□□ 0.52
CLK1-211ENST00000481641 STMND1H3BQB6 276 aa18.31■□□□□ 0.52
CLK1-211ENST00000481641 PSTPIP1O43586 416 aa18.31■□□□□ 0.52
CLK1-211ENST00000481641 CHRNA4P43681 627 aa18.31■□□□□ 0.52
CLK1-211ENST00000481641 WNT3AP56704 352 aa18.31■□□□□ 0.52
CLK1-211ENST00000481641 SLC14A2Q15849 920 aa18.31■□□□□ 0.52
CLK1-211ENST00000481641 ANKS6Q68DC2 871 aa18.31■□□□□ 0.52
CLK1-211ENST00000481641 CCDC70Q6NSX1 233 aa18.31■□□□□ 0.52
CLK1-211ENST00000481641 KDELC1Q6UW63 502 aa18.31■□□□□ 0.52
CLK1-211ENST00000481641 PHYKPLQ8IUZ5 450 aa18.31■□□□□ 0.52
CLK1-211ENST00000481641 NKD1Q969G9 470 aa18.31■□□□□ 0.52
CLK1-211ENST00000481641 PLEKHG4BQ96PX9 1271 aa18.31■□□□□ 0.52
CLK1-211ENST00000481641 CTRCQ99895 268 aa18.31■□□□□ 0.52
CLK1-211ENST00000481641 TRIM5Q9C035 493 aa18.31■□□□□ 0.52
CLK1-211ENST00000481641 STN1Q9H668 368 aaKnown RBP18.31■□□□□ 0.52
CLK1-211ENST00000481641 C10orf88Q9H8K7 445 aa18.31■□□□□ 0.52
CLK1-211ENST00000481641 RAD18Q9NS91 495 aa18.31■□□□□ 0.52
CLK1-211ENST00000481641 NFKBIL1Q9UBC1 381 aaPredicted RBP18.31■□□□□ 0.52
CLK1-211ENST00000481641 FAM153AQ9UHL3 310 aa18.31■□□□□ 0.52
CLK1-211ENST00000481641 PCDHGA3Q9Y5H0 932 aa18.31■□□□□ 0.52
CLK1-211ENST00000481641 hCG_1818297A0A087WSY0 165 aa18.3■□□□□ 0.52
CLK1-211ENST00000481641 KIR2DS5A0A0G2JLQ3 304 aa18.3■□□□□ 0.52
CLK1-211ENST00000481641 A0A0G2JNG1 304 aa18.3■□□□□ 0.52
CLK1-211ENST00000481641 IQCJ-SCHIP1C9J366 451 aaPredicted RBP18.3■□□□□ 0.52
CLK1-211ENST00000481641 KIR2DS3K7RE56 304 aa18.3■□□□□ 0.52
CLK1-211ENST00000481641 CHUKO15111 745 aa18.3■□□□□ 0.52
CLK1-211ENST00000481641 SLC2A4P14672 509 aa18.3■□□□□ 0.52
CLK1-211ENST00000481641 ZNF7P17097 686 aaPredicted RBP18.3■□□□□ 0.52
CLK1-211ENST00000481641 UGT1A3P35503 534 aa18.3■□□□□ 0.52
CLK1-211ENST00000481641 CLCNKAP51800 687 aa18.3■□□□□ 0.52
CLK1-211ENST00000481641 HADHBP55084 474 aaKnown RBP18.3■□□□□ 0.52
CLK1-211ENST00000481641 UBE2IP63279 158 aaKnown RBP18.3■□□□□ 0.52
CLK1-211ENST00000481641 KIR2DS5Q14953 304 aa18.3■□□□□ 0.52
CLK1-211ENST00000481641 SEPT7Q16181 437 aaKnown RBP18.3■□□□□ 0.52
CLK1-211ENST00000481641 INSCQ1MX18 579 aa18.3■□□□□ 0.52
CLK1-211ENST00000481641 ATP13A5Q4VNC0 1218 aa18.3■□□□□ 0.52
CLK1-211ENST00000481641 TFDP3Q5H9I0 405 aa18.3■□□□□ 0.52
CLK1-211ENST00000481641 WDR74Q6RFH5 385 aaPredicted RBP18.3■□□□□ 0.52
CLK1-211ENST00000481641 BZW1Q7L1Q6 419 aaKnown RBP18.3■□□□□ 0.52
CLK1-211ENST00000481641 ARHGAP22Q7Z5H3 698 aa18.3■□□□□ 0.52
CLK1-211ENST00000481641 CCDC50Q8IVM0 306 aa18.3■□□□□ 0.52
CLK1-211ENST00000481641 ZNF547Q8IVP9 402 aa18.3■□□□□ 0.52
CLK1-211ENST00000481641 ZNF567Q8N184 647 aa18.3■□□□□ 0.52
CLK1-211ENST00000481641 BMPERQ8N8U9 685 aa18.3■□□□□ 0.52
CLK1-211ENST00000481641 CCDC112Q8NEF3 446 aa18.3■□□□□ 0.52
CLK1-211ENST00000481641 HTR3CQ8WXA8 447 aa18.3■□□□□ 0.52
CLK1-211ENST00000481641 KRT35Q92764 455 aa18.3■□□□□ 0.52
CLK1-211ENST00000481641 P3H4Q92791 437 aa18.3■□□□□ 0.52
CLK1-211ENST00000481641 SH3KBP1Q96B97 665 aa18.3■□□□□ 0.52
CLK1-211ENST00000481641 OXNAD1Q96HP4 312 aaPredicted RBP18.3■□□□□ 0.52
CLK1-211ENST00000481641 ANP32EQ9BTT0 268 aa18.3■□□□□ 0.52
CLK1-211ENST00000481641 HEMGNQ9BXL5 484 aa18.3■□□□□ 0.52
CLK1-211ENST00000481641 KLHL8Q9P2G9 620 aaPredicted RBP18.3■□□□□ 0.52
CLK1-211ENST00000481641 PCDHA13Q9Y5I0 950 aa18.3■□□□□ 0.52
CLK1-211ENST00000481641 LOC285095A0A1B0GVY8 99 aa18.29■□□□□ 0.52
CLK1-211ENST00000481641 B4E171 279 aa18.29■□□□□ 0.52
CLK1-211ENST00000481641 PYCARD-AS1I3L0S3 204 aa18.29■□□□□ 0.52
CLK1-211ENST00000481641 BUD23O43709 281 aaKnown RBP18.29■□□□□ 0.52
CLK1-211ENST00000481641 CDK14O94921 469 aa18.29■□□□□ 0.52
CLK1-211ENST00000481641 ZRANB2O95218 330 aaKnown RBP eCLIP18.29■□□□□ 0.52
CLK1-211ENST00000481641 CA5AP35218 305 aa18.29■□□□□ 0.52
CLK1-211ENST00000481641 SLC19A1P41440 591 aa18.29■□□□□ 0.52
CLK1-211ENST00000481641 TSPAN7P41732 249 aa18.29■□□□□ 0.52
CLK1-211ENST00000481641 SIRPB2Q5JXA9 342 aa18.29■□□□□ 0.52
CLK1-211ENST00000481641 PDPK2PQ6A1A2 396 aa18.29■□□□□ 0.52
CLK1-211ENST00000481641 PID1Q7Z2X4 250 aa18.29■□□□□ 0.52
CLK1-211ENST00000481641 LRRTM4Q86VH4 590 aa18.29■□□□□ 0.52
CLK1-211ENST00000481641 KATNAL2Q8IYT4 538 aa18.29■□□□□ 0.52
CLK1-211ENST00000481641 TTC30BQ8N4P2 665 aa18.29■□□□□ 0.52
CLK1-211ENST00000481641 RNF31Q96EP0 1072 aa18.29■□□□□ 0.52
CLK1-211ENST00000481641 MRGPRX2Q96LB1 330 aa18.29■□□□□ 0.52
CLK1-211ENST00000481641 DDA1Q9BW61 102 aa18.29■□□□□ 0.52
CLK1-211ENST00000481641 APMAPQ9HDC9 416 aa18.29■□□□□ 0.52
CLK1-211ENST00000481641 ZNF624Q9P2J8 865 aaPredicted RBP18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms