RNA–Protein interactions for RNA: ENST00000481409.1

USP39-215, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-215ENST00000481409 RMI1Q9H9A7 625 aa10.07□□□□□ -0.8
USP39-215ENST00000481409 TRIM39Q9HCM9 518 aa10.07□□□□□ -0.8
USP39-215ENST00000481409 WSB2Q9NYS7 404 aaPredicted RBP10.07□□□□□ -0.8
USP39-215ENST00000481409 OGFRQ9NZT2 677 aa10.07□□□□□ -0.8
USP39-215ENST00000481409 DLGAP2Q9P1A6 1054 aa10.07□□□□□ -0.8
USP39-215ENST00000481409 GRID1Q9ULK0 1009 aa10.07□□□□□ -0.8
USP39-215ENST00000481409 GPR34Q9UPC5 381 aa10.07□□□□□ -0.8
USP39-215ENST00000481409 ZFR2Q9UPR6 939 aaKnown RBP10.07□□□□□ -0.8
USP39-215ENST00000481409 HS3ST3A1Q9Y663 406 aa10.07□□□□□ -0.8
USP39-215ENST00000481409 DNMT3AQ9Y6K1 912 aaPredicted RBP10.07□□□□□ -0.8
USP39-215ENST00000481409 LRRK1Q38SD2 2015 aa10.07□□□□□ -0.8
USP39-215ENST00000481409 TRPM6Q9BX84 2022 aa10.07□□□□□ -0.8
USP39-215ENST00000481409 UBA6A0AVT1 1052 aaPredicted RBP10.06□□□□□ -0.8
USP39-215ENST00000481409 E5RI56 91 aa10.06□□□□□ -0.8
USP39-215ENST00000481409 PLK4O00444 970 aa10.06□□□□□ -0.8
USP39-215ENST00000481409 UGT1A9O60656 530 aa10.06□□□□□ -0.8
USP39-215ENST00000481409 KCNJ13O60928 360 aa10.06□□□□□ -0.8
USP39-215ENST00000481409 GLRA3O75311 464 aa10.06□□□□□ -0.8
USP39-215ENST00000481409 RFPL1O75677 317 aa10.06□□□□□ -0.8
USP39-215ENST00000481409 FTH1P02794 183 aa10.06□□□□□ -0.8
USP39-215ENST00000481409 ALDOAP04075 364 aaKnown RBP10.06□□□□□ -0.8
USP39-215ENST00000481409 APOA4P06727 396 aa10.06□□□□□ -0.8
USP39-215ENST00000481409 BRAFP15056 766 aa10.06□□□□□ -0.8
USP39-215ENST00000481409 UGT1A6P19224 532 aa10.06□□□□□ -0.8
USP39-215ENST00000481409 NR1D1P20393 614 aa10.06□□□□□ -0.8
USP39-215ENST00000481409 UGT1A1P22309 533 aa10.06□□□□□ -0.8
USP39-215ENST00000481409 UGT1A4P22310 534 aa10.06□□□□□ -0.8
USP39-215ENST00000481409 FDXRP22570 491 aa10.06□□□□□ -0.8
USP39-215ENST00000481409 HNRNPA2B1P22626 353 aaKnown RBP10.06□□□□□ -0.8
USP39-215ENST00000481409 KELP23276 732 aa10.06□□□□□ -0.8
USP39-215ENST00000481409 AKT2P31751 481 aa10.06□□□□□ -0.8
USP39-215ENST00000481409 CRHR1P34998 444 aa10.06□□□□□ -0.8
USP39-215ENST00000481409 UGT1A3P35503 534 aa10.06□□□□□ -0.8
USP39-215ENST00000481409 UGT1A5P35504 534 aa10.06□□□□□ -0.8
USP39-215ENST00000481409 MAPK9P45984 424 aa10.06□□□□□ -0.8
USP39-215ENST00000481409 YPEL5P62699 121 aa10.06□□□□□ -0.8
USP39-215ENST00000481409 PPP2R2AP63151 447 aa10.06□□□□□ -0.8
USP39-215ENST00000481409 MTAPQ13126 283 aa10.06□□□□□ -0.8
USP39-215ENST00000481409 GTF2H3Q13889 308 aa10.06□□□□□ -0.8
USP39-215ENST00000481409 TTLL9Q3SXZ7 439 aa10.06□□□□□ -0.8
USP39-215ENST00000481409 USP39Q53GS9 565 aaKnown RBP10.06□□□□□ -0.8
USP39-215ENST00000481409 GPRC6AQ5T6X5 926 aa10.06□□□□□ -0.8
USP39-215ENST00000481409 HECTD2Q5U5R9 776 aa10.06□□□□□ -0.8
USP39-215ENST00000481409 KIAA0895LQ68EN5 471 aa10.06□□□□□ -0.8
USP39-215ENST00000481409 CWF19L1Q69YN2 538 aaKnown RBP10.06□□□□□ -0.8
USP39-215ENST00000481409 PTRHD1Q6GMV3 140 aaKnown RBP10.06□□□□□ -0.8
USP39-215ENST00000481409 ANO7Q6IWH7 933 aa10.06□□□□□ -0.8
USP39-215ENST00000481409 KYAT3Q6YP21 454 aaKnown RBP10.06□□□□□ -0.8
USP39-215ENST00000481409 SH2D5Q6ZV89 423 aa10.06□□□□□ -0.8
USP39-215ENST00000481409 NKAPQ8N5F7 415 aaKnown RBP10.06□□□□□ -0.8
USP39-215ENST00000481409 GPATCH11Q8N954 259 aa10.06□□□□□ -0.8
USP39-215ENST00000481409 TP53I13Q8NBR0 393 aaPredicted RBP10.06□□□□□ -0.8
USP39-215ENST00000481409 FLCNQ8NFG4 579 aa10.06□□□□□ -0.8
USP39-215ENST00000481409 FAM76AQ8TAV0 307 aa10.06□□□□□ -0.8
USP39-215ENST00000481409 FOXJ1Q92949 421 aa10.06□□□□□ -0.8
USP39-215ENST00000481409 SCAMP4Q969E2 229 aa10.06□□□□□ -0.8
USP39-215ENST00000481409 CENPTQ96BT3 561 aa10.06□□□□□ -0.8
USP39-215ENST00000481409 COX14Q96I36 57 aa10.06□□□□□ -0.8
USP39-215ENST00000481409 APOPT1Q96IL0 206 aa10.06□□□□□ -0.8
USP39-215ENST00000481409 ELMO2Q96JJ3 720 aa10.06□□□□□ -0.8
USP39-215ENST00000481409 BIRC8Q96P09 236 aa10.06□□□□□ -0.8
USP39-215ENST00000481409 TEX101Q9BY14 249 aa10.06□□□□□ -0.8
USP39-215ENST00000481409 IQCGQ9H095 443 aaKnown RBP10.06□□□□□ -0.8
USP39-215ENST00000481409 UGT1A7Q9HAW7 530 aa10.06□□□□□ -0.8
USP39-215ENST00000481409 UGT1A10Q9HAW8 530 aa10.06□□□□□ -0.8
USP39-215ENST00000481409 UGT1A8Q9HAW9 530 aa10.06□□□□□ -0.8
USP39-215ENST00000481409 PRMT8Q9NR22 394 aaPredicted RBP10.06□□□□□ -0.8
USP39-215ENST00000481409 SNX15Q9NRS6 342 aa10.06□□□□□ -0.8
USP39-215ENST00000481409 PHPT1Q9NRX4 125 aaPredicted RBP10.06□□□□□ -0.8
USP39-215ENST00000481409 CD84Q9UIB8 345 aa10.06□□□□□ -0.8
USP39-215ENST00000481409 MID2Q9UJV3 735 aa10.06□□□□□ -0.8
USP39-215ENST00000481409 SLC39A10Q9ULF5 831 aa10.06□□□□□ -0.8
USP39-215ENST00000481409 CRYL1Q9Y2S2 319 aa10.06□□□□□ -0.8
USP39-215ENST00000481409 MTO1Q9Y2Z2 717 aaKnown RBP10.06□□□□□ -0.8
USP39-215ENST00000481409 ACOT9Q9Y305 439 aa10.06□□□□□ -0.8
USP39-215ENST00000481409 PLXNB3Q9ULL4 1909 aa10.05□□□□□ -0.8
USP39-215ENST00000481409 PRUNE2Q8WUY3 3088 aa10.05□□□□□ -0.8
USP39-215ENST00000481409 A0A096LPK6 155 aa10.05□□□□□ -0.8
USP39-215ENST00000481409 IGHV1OR15-9A0A0B4J2B8 117 aa10.05□□□□□ -0.8
USP39-215ENST00000481409 A0A0U1RQS6 177 aa10.05□□□□□ -0.8
USP39-215ENST00000481409 C17orf113A0A1B0GUU1 675 aa10.05□□□□□ -0.8
USP39-215ENST00000481409 TMEM221A6NGB7 291 aa10.05□□□□□ -0.8
USP39-215ENST00000481409 FAM47DPA6NHR8 397 aa10.05□□□□□ -0.8
USP39-215ENST00000481409 FADS2P1A8MWK0 482 aa10.05□□□□□ -0.8
USP39-215ENST00000481409 PRAMEF26H0Y7S4 382 aa10.05□□□□□ -0.8
USP39-215ENST00000481409 K7ESF4 209 aa10.05□□□□□ -0.8
USP39-215ENST00000481409 M0R296 226 aa10.05□□□□□ -0.8
USP39-215ENST00000481409 COPEO14579 308 aa10.05□□□□□ -0.8
USP39-215ENST00000481409 FPGTO14772 594 aa10.05□□□□□ -0.8
USP39-215ENST00000481409 TPP1O14773 563 aa10.05□□□□□ -0.8
USP39-215ENST00000481409 AXIN1O15169 862 aa10.05□□□□□ -0.8
USP39-215ENST00000481409 NDUFS2O75306 463 aa10.05□□□□□ -0.8
USP39-215ENST00000481409 PIAS1O75925 651 aa10.05□□□□□ -0.8
USP39-215ENST00000481409 RHOBTB1O94844 696 aa10.05□□□□□ -0.8
USP39-215ENST00000481409 PAK4O96013 591 aaPredicted RBP10.05□□□□□ -0.8
USP39-215ENST00000481409 SOD1P00441 154 aa10.05□□□□□ -0.8
USP39-215ENST00000481409 C2P06681 752 aa10.05□□□□□ -0.8
USP39-215ENST00000481409 CBSLP0DN79 551 aa10.05□□□□□ -0.8
USP39-215ENST00000481409 MYCLP1P12525 358 aaPredicted RBP10.05□□□□□ -0.8
USP39-215ENST00000481409 AKT1P31749 480 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms