RNA–Protein interactions for RNA: ENST00000481173.1

CCNL1-223, Transcript of cyclin L1, human

TSL 2

Gene CCNL1, Length 571 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNL1-223	ENST00000481173	EIF3CL	B5ME19	914 aa	Known RBP	3	□□□□□ -1.93
CCNL1-223	ENST00000481173	TMEM178B	H3BS89	294 aa		3	□□□□□ -1.93
CCNL1-223	ENST00000481173	PRSS56	P0CW18	603 aa		3	□□□□□ -1.93
CCNL1-223	ENST00000481173	ERVK-10	P10266	1014 aa		3	□□□□□ -1.93
CCNL1-223	ENST00000481173	UGT1A1	P22309	533 aa		3	□□□□□ -1.93
CCNL1-223	ENST00000481173	UBA7	P41226	1012 aa		3	□□□□□ -1.93
CCNL1-223	ENST00000481173	CCT5	P48643	541 aa		3	□□□□□ -1.93
CCNL1-223	ENST00000481173	DSCR10	P59022	87 aa		3	□□□□□ -1.93
CCNL1-223	ENST00000481173	OLIG2	Q13516	323 aa		3	□□□□□ -1.93
CCNL1-223	ENST00000481173	FRG1	Q14331	258 aa	Known RBP	3	□□□□□ -1.93
CCNL1-223	ENST00000481173	MYLK3	Q32MK0	819 aa		3	□□□□□ -1.93
CCNL1-223	ENST00000481173	CDON	Q4KMG0	1287 aa		3	□□□□□ -1.93
CCNL1-223	ENST00000481173	KRTCAP3	Q53RY4	240 aa		3	□□□□□ -1.93
CCNL1-223	ENST00000481173	TECRL	Q5HYJ1	363 aa		3	□□□□□ -1.93
CCNL1-223	ENST00000481173	FAM53A	Q6NSI3	398 aa	Predicted RBP	3	□□□□□ -1.93
CCNL1-223	ENST00000481173	CDC73	Q6P1J9	531 aa		3	□□□□□ -1.93
CCNL1-223	ENST00000481173	RBMS3	Q6XE24	437 aa	Known RBP	3	□□□□□ -1.93
CCNL1-223	ENST00000481173	GSTA5	Q7RTV2	222 aa		3	□□□□□ -1.93
CCNL1-223	ENST00000481173	ATG9A	Q7Z3C6	839 aa		3	□□□□□ -1.93
CCNL1-223	ENST00000481173	NOTCH2NL	Q7Z3S9	236 aa		3	□□□□□ -1.93
CCNL1-223	ENST00000481173	HEATR4	Q86WZ0	1026 aa		3	□□□□□ -1.93
CCNL1-223	ENST00000481173	ZNF354C	Q86Y25	554 aa		3	□□□□□ -1.93
CCNL1-223	ENST00000481173	NFKBID	Q8NI38	313 aa		3	□□□□□ -1.93
CCNL1-223	ENST00000481173	UTP15	Q8TED0	518 aa	Known RBP	3	□□□□□ -1.93
CCNL1-223	ENST00000481173	LRR1	Q96L50	414 aa		3	□□□□□ -1.93
CCNL1-223	ENST00000481173	TMEM68	Q96MH6	324 aa		3	□□□□□ -1.93
CCNL1-223	ENST00000481173	PSD2	Q9BQI7	771 aa		3	□□□□□ -1.93
CCNL1-223	ENST00000481173	PAIP1	Q9H074	479 aa	Known RBP	3	□□□□□ -1.93
CCNL1-223	ENST00000481173	SAGE1	Q9NXZ1	904 aa		3	□□□□□ -1.93
CCNL1-223	ENST00000481173	PTTG2	Q9NZH5	202 aa		3	□□□□□ -1.93
CCNL1-223	ENST00000481173	LUZP4	Q9P127	313 aa		3	□□□□□ -1.93
CCNL1-223	ENST00000481173	GJD2	Q9UKL4	321 aa		3	□□□□□ -1.93
CCNL1-223	ENST00000481173		A0A1W2PP11	408 aa		2.99	□□□□□ -1.93
CCNL1-223	ENST00000481173	NR5A2	O00482	541 aa		2.99	□□□□□ -1.93
CCNL1-223	ENST00000481173	SYNCRIP	O60506	623 aa	Known RBP	2.99	□□□□□ -1.93
CCNL1-223	ENST00000481173	NR3C1	P04150	777 aa		2.99	□□□□□ -1.93
CCNL1-223	ENST00000481173	KRT19	P08727	400 aa		2.99	□□□□□ -1.93
CCNL1-223	ENST00000481173	CSF2RA	P15509	400 aa		2.99	□□□□□ -1.93
CCNL1-223	ENST00000481173	MSH3	P20585	1137 aa		2.99	□□□□□ -1.93
CCNL1-223	ENST00000481173	UBA1	P22314	1058 aa	Known RBP	2.99	□□□□□ -1.93
CCNL1-223	ENST00000481173	NR2F2	P24468	414 aa		2.99	□□□□□ -1.93
CCNL1-223	ENST00000481173	HOXC9	P31274	260 aa		2.99	□□□□□ -1.93
CCNL1-223	ENST00000481173	ICAM3	P32942	547 aa		2.99	□□□□□ -1.93
CCNL1-223	ENST00000481173	MAP2K2	P36507	400 aa		2.99	□□□□□ -1.93
CCNL1-223	ENST00000481173	CSRP3	P50461	194 aa		2.99	□□□□□ -1.93
CCNL1-223	ENST00000481173	EIF3B	P55884	814 aa	Known RBP	2.99	□□□□□ -1.93
CCNL1-223	ENST00000481173	KRTAP10-8	P60410	259 aa		2.99	□□□□□ -1.93
CCNL1-223	ENST00000481173	MBTD1	Q05BQ5	628 aa		2.99	□□□□□ -1.93
CCNL1-223	ENST00000481173	ACVR2B	Q13705	512 aa		2.99	□□□□□ -1.93
CCNL1-223	ENST00000481173	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	2.99	□□□□□ -1.93
CCNL1-223	ENST00000481173	PAPD4	Q6PIY7	484 aa	Known RBP	2.99	□□□□□ -1.93
CCNL1-223	ENST00000481173	PLXDC2	Q6UX71	529 aa		2.99	□□□□□ -1.93
CCNL1-223	ENST00000481173	PLEKHM3	Q6ZWE6	761 aa		2.99	□□□□□ -1.93
CCNL1-223	ENST00000481173	APLF	Q8IW19	511 aa	Predicted RBP	2.99	□□□□□ -1.93
CCNL1-223	ENST00000481173	DNAAF4	Q8WXU2	420 aa		2.99	□□□□□ -1.93
CCNL1-223	ENST00000481173	ARHGEF26	Q96DR7	871 aa		2.99	□□□□□ -1.93
CCNL1-223	ENST00000481173	OXNAD1	Q96HP4	312 aa	Predicted RBP	2.99	□□□□□ -1.93
CCNL1-223	ENST00000481173	NR1H4	Q96RI1	486 aa	Predicted RBP	2.99	□□□□□ -1.93
CCNL1-223	ENST00000481173	SEMA3C	Q99985	751 aa		2.99	□□□□□ -1.93
CCNL1-223	ENST00000481173	ABI3	Q9P2A4	366 aa		2.99	□□□□□ -1.93
CCNL1-223	ENST00000481173	COPG2	Q9UBF2	871 aa		2.99	□□□□□ -1.93
CCNL1-223	ENST00000481173	C2CD2	Q9Y426	696 aa		2.99	□□□□□ -1.93
CCNL1-223	ENST00000481173	KRTAP16-1	A8MUX0	517 aa		2.98	□□□□□ -1.93
CCNL1-223	ENST00000481173	PLOD2	O00469	737 aa		2.98	□□□□□ -1.93
CCNL1-223	ENST00000481173	TGFB1I1	O43294	461 aa		2.98	□□□□□ -1.93
CCNL1-223	ENST00000481173	ZNF821	O75541	412 aa	Predicted RBP	2.98	□□□□□ -1.93
CCNL1-223	ENST00000481173	WISP2	O76076	250 aa		2.98	□□□□□ -1.93
CCNL1-223	ENST00000481173	ZNF23	P17027	643 aa		2.98	□□□□□ -1.93
CCNL1-223	ENST00000481173	XBP1	P17861	261 aa		2.98	□□□□□ -1.93
CCNL1-223	ENST00000481173	EPHA8	P29322	1005 aa	Predicted RBP	2.98	□□□□□ -1.93
CCNL1-223	ENST00000481173	F2RL1	P55085	397 aa		2.98	□□□□□ -1.93
CCNL1-223	ENST00000481173	KRTAP12-2	P59991	146 aa		2.98	□□□□□ -1.93
CCNL1-223	ENST00000481173	CD81	P60033	236 aa		2.98	□□□□□ -1.93
CCNL1-223	ENST00000481173	TMEM115	Q12893	351 aa	Predicted RBP	2.98	□□□□□ -1.93
CCNL1-223	ENST00000481173	NSUN5P2	Q63ZY6	315 aa		2.98	□□□□□ -1.93
CCNL1-223	ENST00000481173	STXBP4	Q6ZWJ1	553 aa		2.98	□□□□□ -1.93
CCNL1-223	ENST00000481173	SDCCAG8	Q86SQ7	713 aa	Predicted RBP	2.98	□□□□□ -1.93
CCNL1-223	ENST00000481173	GBGT1	Q8N5D6	347 aa		2.98	□□□□□ -1.93
CCNL1-223	ENST00000481173	ESX1	Q8N693	406 aa		2.98	□□□□□ -1.93
CCNL1-223	ENST00000481173	HM13	Q8TCT9	377 aa		2.98	□□□□□ -1.93
CCNL1-223	ENST00000481173	TMEM190	Q8WZ59	177 aa		2.98	□□□□□ -1.93
CCNL1-223	ENST00000481173	RRP36	Q96EU6	259 aa	Known RBP	2.98	□□□□□ -1.93
CCNL1-223	ENST00000481173	MMAB	Q96EY8	250 aa	Predicted RBP	2.98	□□□□□ -1.93
CCNL1-223	ENST00000481173	SENP5	Q96HI0	755 aa	Predicted RBP	2.98	□□□□□ -1.93
CCNL1-223	ENST00000481173	PIP5K1A	Q99755	562 aa		2.98	□□□□□ -1.93
CCNL1-223	ENST00000481173	PIGM	Q9H3S5	423 aa		2.98	□□□□□ -1.93
CCNL1-223	ENST00000481173	INTS10	Q9NVR2	710 aa	Known RBP	2.98	□□□□□ -1.93
CCNL1-223	ENST00000481173	STK39	Q9UEW8	545 aa		2.98	□□□□□ -1.93
CCNL1-223	ENST00000481173	CLIC4	Q9Y696	253 aa		2.98	□□□□□ -1.93
CCNL1-223	ENST00000481173	MAU2	Q9Y6X3	613 aa		2.98	□□□□□ -1.93
CCNL1-223	ENST00000481173	NOTCH2	Q04721	2471 aa		2.98	□□□□□ -1.93
CCNL1-223	ENST00000481173	KDM3A	Q9Y4C1	1321 aa		2.97	□□□□□ -1.93
CCNL1-223	ENST00000481173		A0A0G2JLW4	131 aa		2.97	□□□□□ -1.93
CCNL1-223	ENST00000481173	CCDC196	A0A1B0GTZ2	297 aa		2.97	□□□□□ -1.93
CCNL1-223	ENST00000481173		A0A1W2PNU3	283 aa	Predicted RBP	2.97	□□□□□ -1.93
CCNL1-223	ENST00000481173		A0A1W2PPI3	338 aa		2.97	□□□□□ -1.93
CCNL1-223	ENST00000481173	EIF4E1B	A6NMX2	242 aa	Known RBP	2.97	□□□□□ -1.93
CCNL1-223	ENST00000481173	ATP2A1	O14983	1001 aa		2.97	□□□□□ -1.93
CCNL1-223	ENST00000481173	JRK	O75564	520 aa		2.97	□□□□□ -1.93
CCNL1-223	ENST00000481173	TSHB	P01222	138 aa		2.97	□□□□□ -1.93

Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms