RNA–Protein interactions for RNA: ENST00000480327.1

VCP-206, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 884 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-206ENST00000480327 LRRC8BQ6P9F7 803 aa8.99□□□□□ -0.97
VCP-206ENST00000480327 FAM151BQ6UXP7 276 aa8.99□□□□□ -0.97
VCP-206ENST00000480327 MPP5Q8N3R9 675 aa8.99□□□□□ -0.97
VCP-206ENST00000480327 CEP112Q8N8E3 955 aa8.99□□□□□ -0.97
VCP-206ENST00000480327 NAT8LQ8N9F0 302 aa8.99□□□□□ -0.97
VCP-206ENST00000480327 FAM181AQ8N9Y4 354 aa8.99□□□□□ -0.97
VCP-206ENST00000480327 LRRN4CLQ8ND94 238 aa8.99□□□□□ -0.97
VCP-206ENST00000480327 OR4K2Q8NGD2 314 aa8.99□□□□□ -0.97
VCP-206ENST00000480327 SNF8Q96H20 258 aa8.99□□□□□ -0.97
VCP-206ENST00000480327 DNAJC1Q96KC8 554 aaKnown RBP8.99□□□□□ -0.97
VCP-206ENST00000480327 ZNF578Q96N58 590 aaPredicted RBP8.99□□□□□ -0.97
VCP-206ENST00000480327 PWWP2AQ96N64 755 aa8.99□□□□□ -0.97
VCP-206ENST00000480327 ERP44Q9BS26 406 aa8.99□□□□□ -0.97
VCP-206ENST00000480327 SYBUQ9NX95 663 aa8.99□□□□□ -0.97
VCP-206ENST00000480327 NLGN3Q9NZ94 848 aa8.99□□□□□ -0.97
VCP-206ENST00000480327 IL17CQ9P0M4 197 aa8.99□□□□□ -0.97
VCP-206ENST00000480327 FKBPLQ9UIM3 349 aa8.99□□□□□ -0.97
VCP-206ENST00000480327 ANAPC5Q9UJX4 755 aa8.99□□□□□ -0.97
VCP-206ENST00000480327 PKP3Q9Y446 797 aa8.99□□□□□ -0.97
VCP-206ENST00000480327 HS3ST3A1Q9Y663 406 aa8.99□□□□□ -0.97
VCP-206ENST00000480327 COL12A1Q99715 3063 aa8.99□□□□□ -0.97
VCP-206ENST00000480327 UBR5O95071 2799 aaPredicted RBP8.98□□□□□ -0.97
VCP-206ENST00000480327 ESYT3A0FGR9 886 aa8.98□□□□□ -0.97
VCP-206ENST00000480327 SCAMP1O15126 338 aa8.98□□□□□ -0.97
VCP-206ENST00000480327 GPR39O43194 453 aa8.98□□□□□ -0.97
VCP-206ENST00000480327 LDB2O43679 373 aa8.98□□□□□ -0.97
VCP-206ENST00000480327 UGT1A9O60656 530 aa8.98□□□□□ -0.97
VCP-206ENST00000480327 BANF1O75531 89 aa8.98□□□□□ -0.97
VCP-206ENST00000480327 UGT1A6P19224 532 aa8.98□□□□□ -0.97
VCP-206ENST00000480327 UGT1A1P22309 533 aa8.98□□□□□ -0.97
VCP-206ENST00000480327 UGT1A4P22310 534 aa8.98□□□□□ -0.97
VCP-206ENST00000480327 UGT1A3P35503 534 aa8.98□□□□□ -0.97
VCP-206ENST00000480327 UGT1A5P35504 534 aa8.98□□□□□ -0.97
VCP-206ENST00000480327 HMGCLP35914 325 aa8.98□□□□□ -0.97
VCP-206ENST00000480327 SPAM1P38567 509 aa8.98□□□□□ -0.97
VCP-206ENST00000480327 LSSP48449 732 aa8.98□□□□□ -0.97
VCP-206ENST00000480327 NPY2RP49146 381 aa8.98□□□□□ -0.97
VCP-206ENST00000480327 ZNF140P52738 457 aaPredicted RBP8.98□□□□□ -0.97
VCP-206ENST00000480327 THOP1P52888 689 aa8.98□□□□□ -0.97
VCP-206ENST00000480327 PDX1P52945 283 aa8.98□□□□□ -0.97
VCP-206ENST00000480327 PCBP4P57723 403 aaKnown RBP8.98□□□□□ -0.97
VCP-206ENST00000480327 GABREP78334 506 aa8.98□□□□□ -0.97
VCP-206ENST00000480327 CDK16Q00536 496 aa8.98□□□□□ -0.97
VCP-206ENST00000480327 CFHR1Q03591 330 aa8.98□□□□□ -0.97
VCP-206ENST00000480327 HP1BP3Q5SSJ5 553 aaPredicted RBP8.98□□□□□ -0.97
VCP-206ENST00000480327 FNBP1LQ5T0N5 605 aa8.98□□□□□ -0.97
VCP-206ENST00000480327 ZNF648Q5T619 568 aaPredicted RBP8.98□□□□□ -0.97
VCP-206ENST00000480327 ESRP1Q6NXG1 681 aaKnown RBP8.98□□□□□ -0.97
VCP-206ENST00000480327 CASC4Q6P4E1 433 aa8.98□□□□□ -0.97
VCP-206ENST00000480327 GUSBP11Q6P575 273 aa8.98□□□□□ -0.97
VCP-206ENST00000480327 DOK6Q6PKX4 331 aa8.98□□□□□ -0.97
VCP-206ENST00000480327 CES3Q6UWW8 571 aa8.98□□□□□ -0.97
VCP-206ENST00000480327 KYAT3Q6YP21 454 aaKnown RBP8.98□□□□□ -0.97
VCP-206ENST00000480327 PCGF5Q86SE9 256 aa8.98□□□□□ -0.97
VCP-206ENST00000480327 TRIM74Q86UV6 250 aa8.98□□□□□ -0.97
VCP-206ENST00000480327 CAND1Q86VP6 1230 aaKnown RBP8.98□□□□□ -0.97
VCP-206ENST00000480327 HEATR4Q86WZ0 1026 aa8.98□□□□□ -0.97
VCP-206ENST00000480327 NRSN1Q8IZ57 195 aa8.98□□□□□ -0.97
VCP-206ENST00000480327 MMGT1Q8N4V1 131 aa8.98□□□□□ -0.97
VCP-206ENST00000480327 ZNF248Q8NDW4 579 aa8.98□□□□□ -0.97
VCP-206ENST00000480327 DENND6BQ8NEG7 585 aa8.98□□□□□ -0.97
VCP-206ENST00000480327 ZNF548Q8NEK5 533 aaPredicted RBP8.98□□□□□ -0.97
VCP-206ENST00000480327 PPHLN1Q8NEY8 458 aaKnown RBP8.98□□□□□ -0.97
VCP-206ENST00000480327 TTC9Q92623 222 aa8.98□□□□□ -0.97
VCP-206ENST00000480327 FUBP1Q96AE4 644 aaKnown RBP8.98□□□□□ -0.97
VCP-206ENST00000480327 ZNF778Q96MU6 729 aa8.98□□□□□ -0.97
VCP-206ENST00000480327 SERPINB12Q96P63 405 aa8.98□□□□□ -0.97
VCP-206ENST00000480327 APOOQ9BUR5 198 aa8.98□□□□□ -0.97
VCP-206ENST00000480327 LGR4Q9BXB1 951 aa8.98□□□□□ -0.97
VCP-206ENST00000480327 TCEAL2Q9H3H9 227 aaPredicted RBP8.98□□□□□ -0.97
VCP-206ENST00000480327 FAM96AQ9H5X1 160 aa8.98□□□□□ -0.97
VCP-206ENST00000480327 SUDS3Q9H7L9 328 aaPredicted RBP8.98□□□□□ -0.97
VCP-206ENST00000480327 UGT1A7Q9HAW7 530 aa8.98□□□□□ -0.97
VCP-206ENST00000480327 UGT1A10Q9HAW8 530 aa8.98□□□□□ -0.97
VCP-206ENST00000480327 UGT1A8Q9HAW9 530 aa8.98□□□□□ -0.97
VCP-206ENST00000480327 ARFGAP3Q9NP61 516 aa8.98□□□□□ -0.97
VCP-206ENST00000480327 IL26Q9NPH9 171 aa8.98□□□□□ -0.97
VCP-206ENST00000480327 CHRAC1Q9NRG0 131 aa8.98□□□□□ -0.97
VCP-206ENST00000480327 DNAJC28Q9NX36 388 aa8.98□□□□□ -0.97
VCP-206ENST00000480327 BFARQ9NZS9 450 aa8.98□□□□□ -0.97
VCP-206ENST00000480327 SLC2A6Q9UGQ3 507 aa8.98□□□□□ -0.97
VCP-206ENST00000480327 MOSPD1Q9UJG1 213 aa8.98□□□□□ -0.97
VCP-206ENST00000480327 UTP11Q9Y3A2 253 aaKnown RBP8.98□□□□□ -0.97
VCP-206ENST00000480327 UNC13CQ8NB66 2214 aa8.97□□□□□ -0.97
VCP-206ENST00000480327 HECTD1Q9ULT8 2610 aa8.97□□□□□ -0.97
VCP-206ENST00000480327 ARHGEF17Q96PE2 2063 aaPredicted RBP8.97□□□□□ -0.97
VCP-206ENST00000480327 GLYATL1P3A0A0U1RQE8 302 aa8.97□□□□□ -0.97
VCP-206ENST00000480327 SPTY2D1-AS1A0A0U1RR47 76 aa8.97□□□□□ -0.97
VCP-206ENST00000480327 HEATR9A2RTY3 570 aa8.97□□□□□ -0.97
VCP-206ENST00000480327 RGSL1A5PLK6 1076 aa8.97□□□□□ -0.97
VCP-206ENST00000480327 OR51F1A6NGY5 319 aa8.97□□□□□ -0.97
VCP-206ENST00000480327 FADS2P1A8MWK0 482 aa8.97□□□□□ -0.97
VCP-206ENST00000480327 PYCARD-AS1I3L0S3 204 aa8.97□□□□□ -0.97
VCP-206ENST00000480327 ERVH48-1M5A8F1 160 aa8.97□□□□□ -0.97
VCP-206ENST00000480327 CACNB4O00305 520 aaPredicted RBP8.97□□□□□ -0.97
VCP-206ENST00000480327 SEC31AO94979 1220 aaKnown RBP8.97□□□□□ -0.97
VCP-206ENST00000480327 SOD1P00441 154 aa8.97□□□□□ -0.97
VCP-206ENST00000480327 CSF2P04141 144 aa8.97□□□□□ -0.97
VCP-206ENST00000480327 GP1BAP07359 652 aa8.97□□□□□ -0.97
VCP-206ENST00000480327 PRSS56P0CW18 603 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms