RNA–Protein interactions for RNA: ENST00000479656.5

APTX-223, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,881 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-223ENST00000479656 WISP3O95389 354 aaPredicted RBP11.1□□□□□ -0.63
APTX-223ENST00000479656 CCDC166P0CW27 439 aa11.1□□□□□ -0.63
APTX-223ENST00000479656 ACADMP11310 421 aa11.1□□□□□ -0.63
APTX-223ENST00000479656 NDUFV2P19404 249 aa11.1□□□□□ -0.63
APTX-223ENST00000479656 RPS3P23396 243 aaKnown RBP eCLIP11.1□□□□□ -0.63
APTX-223ENST00000479656 GLRBP48167 497 aa11.1□□□□□ -0.63
APTX-223ENST00000479656 B4GALNT1Q00973 533 aa11.1□□□□□ -0.63
APTX-223ENST00000479656 CREB5Q02930 508 aa11.1□□□□□ -0.63
APTX-223ENST00000479656 FZD5Q13467 585 aa11.1□□□□□ -0.63
APTX-223ENST00000479656 CSHL1Q14406 222 aa11.1□□□□□ -0.63
APTX-223ENST00000479656 ITIH4Q14624 930 aa11.1□□□□□ -0.63
APTX-223ENST00000479656 UBXN2BQ14CS0 331 aa11.1□□□□□ -0.63
APTX-223ENST00000479656 ZNF648Q5T619 568 aaPredicted RBP11.1□□□□□ -0.63
APTX-223ENST00000479656 PTRHD1Q6GMV3 140 aaKnown RBP11.1□□□□□ -0.63
APTX-223ENST00000479656 PAQR3Q6TCH7 311 aa11.1□□□□□ -0.63
APTX-223ENST00000479656 KIAA1324Q6UXG2 1013 aaKnown RBP11.1□□□□□ -0.63
APTX-223ENST00000479656 RAVER1Q8IY67 606 aaKnown RBP11.1□□□□□ -0.63
APTX-223ENST00000479656 HEXDCQ8WVB3 486 aa11.1□□□□□ -0.63
APTX-223ENST00000479656 BTN2A2Q8WVV5 523 aa11.1□□□□□ -0.63
APTX-223ENST00000479656 SCYL1Q96KG9 808 aa11.1□□□□□ -0.63
APTX-223ENST00000479656 TSNARE1Q96NA8 513 aa11.1□□□□□ -0.63
APTX-223ENST00000479656 GPR21Q99679 349 aa11.1□□□□□ -0.63
APTX-223ENST00000479656 SLC30A3Q99726 388 aa11.1□□□□□ -0.63
APTX-223ENST00000479656 RABEP2Q9H5N1 569 aa11.1□□□□□ -0.63
APTX-223ENST00000479656 NMRAL1Q9HBL8 299 aa11.1□□□□□ -0.63
APTX-223ENST00000479656 SARS2Q9NP81 518 aaKnown RBP11.1□□□□□ -0.63
APTX-223ENST00000479656 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.1□□□□□ -0.63
APTX-223ENST00000479656 PCDHB1Q9Y5F3 818 aa11.1□□□□□ -0.63
APTX-223ENST00000479656 COMMD10Q9Y6G5 202 aa11.1□□□□□ -0.63
APTX-223ENST00000479656 PRR23AA6NEV1 266 aa11.1□□□□□ -0.63
APTX-223ENST00000479656 FAM170BA6NMN3 283 aa11.1□□□□□ -0.63
APTX-223ENST00000479656 K7ESM1 405 aa11.1□□□□□ -0.63
APTX-223ENST00000479656 INPP4BO15327 924 aa11.1□□□□□ -0.63
APTX-223ENST00000479656 VPS26AO75436 327 aa11.1□□□□□ -0.63
APTX-223ENST00000479656 TM7SF2O76062 418 aa11.1□□□□□ -0.63
APTX-223ENST00000479656 PROCP04070 461 aa11.1□□□□□ -0.63
APTX-223ENST00000479656 GABRG2P18507 467 aa11.1□□□□□ -0.63
APTX-223ENST00000479656 ITGB6P18564 788 aa11.1□□□□□ -0.63
APTX-223ENST00000479656 NSG1P42857 185 aa11.1□□□□□ -0.63
APTX-223ENST00000479656 SERPINB4P48594 390 aa11.1□□□□□ -0.63
APTX-223ENST00000479656 STARD6P59095 220 aa11.1□□□□□ -0.63
APTX-223ENST00000479656 ZBTB16Q05516 673 aa11.1□□□□□ -0.63
APTX-223ENST00000479656 CCDC153Q494R4 210 aa11.1□□□□□ -0.63
APTX-223ENST00000479656 SEL1L3Q68CR1 1132 aa11.1□□□□□ -0.63
APTX-223ENST00000479656 FAM124AQ86V42 546 aa11.1□□□□□ -0.63
APTX-223ENST00000479656 SIX5Q8N196 739 aa11.1□□□□□ -0.63
APTX-223ENST00000479656 SIDT2Q8NBJ9 832 aaKnown RBP11.1□□□□□ -0.63
APTX-223ENST00000479656 KLK6Q92876 244 aa11.1□□□□□ -0.63
APTX-223ENST00000479656 FAM131CQ96AQ9 280 aa11.1□□□□□ -0.63
APTX-223ENST00000479656 UBXN10Q96LJ8 280 aa11.1□□□□□ -0.63
APTX-223ENST00000479656 MAGEB18Q96M61 343 aa11.1□□□□□ -0.63
APTX-223ENST00000479656 GPR78Q96P69 363 aa11.1□□□□□ -0.63
APTX-223ENST00000479656 MECRQ9BV79 373 aa11.1□□□□□ -0.63
APTX-223ENST00000479656 OSBPL6Q9BZF3 934 aa11.1□□□□□ -0.63
APTX-223ENST00000479656 FOXQ1Q9C009 403 aa11.1□□□□□ -0.63
APTX-223ENST00000479656 POPDC3Q9HBV1 291 aa11.1□□□□□ -0.63
APTX-223ENST00000479656 LTB4R2Q9NPC1 389 aa11.1□□□□□ -0.63
APTX-223ENST00000479656 CD93Q9NPY3 652 aa11.1□□□□□ -0.63
APTX-223ENST00000479656 IGSF5Q9NSI5 407 aa11.1□□□□□ -0.63
APTX-223ENST00000479656 SMOXQ9NWM0 555 aa11.1□□□□□ -0.63
APTX-223ENST00000479656 PSD3Q9NYI0 1048 aa11.1□□□□□ -0.63
APTX-223ENST00000479656 MBD1Q9UIS9 605 aaPredicted RBP11.1□□□□□ -0.63
APTX-223ENST00000479656 GNPTGQ9UJJ9 305 aa11.1□□□□□ -0.63
APTX-223ENST00000479656 SCML1Q9UN30 329 aa11.1□□□□□ -0.63
APTX-223ENST00000479656 ZFR2Q9UPR6 939 aaKnown RBP11.1□□□□□ -0.63
APTX-223ENST00000479656 NCKAP1Q9Y2A7 1128 aa11.1□□□□□ -0.63
APTX-223ENST00000479656 MRPS17Q9Y2R5 130 aaKnown RBP11.1□□□□□ -0.63
APTX-223ENST00000479656 IGLV3-16A0A075B6K0 115 aa11.09□□□□□ -0.63
APTX-223ENST00000479656 TBC1D3DA0A087WVF3 549 aa11.09□□□□□ -0.63
APTX-223ENST00000479656 TBC1D3IA0A087WXS9 549 aa11.09□□□□□ -0.63
APTX-223ENST00000479656 TBC1D3EA0A087X179 549 aa11.09□□□□□ -0.63
APTX-223ENST00000479656 TBC1D3KA0A087X1G2 549 aa11.09□□□□□ -0.63
APTX-223ENST00000479656 KANSL1LA0AUZ9 987 aa11.09□□□□□ -0.63
APTX-223ENST00000479656 TBC1D3FA6NER0 549 aaPredicted RBP11.09□□□□□ -0.63
APTX-223ENST00000479656 TBC1D3LB9A6J9 549 aa11.09□□□□□ -0.63
APTX-223ENST00000479656 PLRG1O43660 514 aaKnown RBP11.09□□□□□ -0.63
APTX-223ENST00000479656 SLC25A14O95258 325 aaPredicted RBP11.09□□□□□ -0.63
APTX-223ENST00000479656 TRIM16O95361 564 aa11.09□□□□□ -0.63
APTX-223ENST00000479656 PAK4O96013 591 aaPredicted RBP11.09□□□□□ -0.63
APTX-223ENST00000479656 SOD1P00441 154 aa11.09□□□□□ -0.63
APTX-223ENST00000479656 PYGLP06737 847 aa11.09□□□□□ -0.63
APTX-223ENST00000479656 LTA4HP09960 611 aaKnown RBP11.09□□□□□ -0.63
APTX-223ENST00000479656 TBC1D3HP0C7X1 549 aa11.09□□□□□ -0.63
APTX-223ENST00000479656 AKT1P31749 480 aa11.09□□□□□ -0.63
APTX-223ENST00000479656 GPR1P46091 355 aa11.09□□□□□ -0.63
APTX-223ENST00000479656 GAS6Q14393 721 aa11.09□□□□□ -0.63
APTX-223ENST00000479656 TERF2Q15554 542 aa11.09□□□□□ -0.63
APTX-223ENST00000479656 FAM83EQ2M2I3 478 aa11.09□□□□□ -0.63
APTX-223ENST00000479656 TTC31Q49AM3 519 aaPredicted RBP11.09□□□□□ -0.63
APTX-223ENST00000479656 KHDC1Q4VXA5 237 aaKnown RBP11.09□□□□□ -0.63
APTX-223ENST00000479656 TBC1D3GQ6DHY5 549 aa11.09□□□□□ -0.63
APTX-223ENST00000479656 TBC1D3CQ6IPX1 549 aa11.09□□□□□ -0.63
APTX-223ENST00000479656 ZNF765Q7L2R6 523 aa11.09□□□□□ -0.63
APTX-223ENST00000479656 DET1Q7L5Y6 550 aa11.09□□□□□ -0.63
APTX-223ENST00000479656 TBC1D3Q8IZP1 549 aaPredicted RBP11.09□□□□□ -0.63
APTX-223ENST00000479656 FSTL5Q8N475 847 aaPredicted RBP11.09□□□□□ -0.63
APTX-223ENST00000479656 TMEM151AQ8N4L1 468 aa11.09□□□□□ -0.63
APTX-223ENST00000479656 LKAAEAR1Q8TD35 194 aa11.09□□□□□ -0.63
APTX-223ENST00000479656 HMGB4Q8WW32 186 aa11.09□□□□□ -0.63
APTX-223ENST00000479656 KCNJ9Q92806 393 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms