RNA–Protein interactions for RNA: ENST00000479554.5

ATG4B-218, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-218ENST00000479554 EID2BQ96D98 161 aa14.18□□□□□ -0.14
ATG4B-218ENST00000479554 HERPUD2Q9BSE4 406 aa14.18□□□□□ -0.14
ATG4B-218ENST00000479554 ZSCAN5AQ9BUG6 496 aa14.18□□□□□ -0.14
ATG4B-218ENST00000479554 GPR63Q9BZJ6 419 aa14.18□□□□□ -0.14
ATG4B-218ENST00000479554 B3GNT4Q9C0J1 378 aa14.18□□□□□ -0.14
ATG4B-218ENST00000479554 GLOD4Q9HC38 313 aa14.18□□□□□ -0.14
ATG4B-218ENST00000479554 MAGEE1Q9HCI5 957 aa14.18□□□□□ -0.14
ATG4B-218ENST00000479554 ARFGAP3Q9NP61 516 aa14.18□□□□□ -0.14
ATG4B-218ENST00000479554 NFKBIL1Q9UBC1 381 aaPredicted RBP14.18□□□□□ -0.14
ATG4B-218ENST00000479554 TBC1D29Q9UFV1 150 aa14.18□□□□□ -0.14
ATG4B-218ENST00000479554 PCDHB11Q9Y5F2 797 aa14.18□□□□□ -0.14
ATG4B-218ENST00000479554 A0A0U1RQJ8 604 aa14.17□□□□□ -0.14
ATG4B-218ENST00000479554 EFSO43281 561 aa14.17□□□□□ -0.14
ATG4B-218ENST00000479554 CST8O60676 142 aa14.17□□□□□ -0.14
ATG4B-218ENST00000479554 SNX2O60749 519 aa14.17□□□□□ -0.14
ATG4B-218ENST00000479554 PMPCBO75439 489 aa14.17□□□□□ -0.14
ATG4B-218ENST00000479554 SLC25A14O95258 325 aaPredicted RBP14.17□□□□□ -0.14
ATG4B-218ENST00000479554 NDST3O95803 873 aa14.17□□□□□ -0.14
ATG4B-218ENST00000479554 MT-CYBP00156 380 aaPredicted RBP14.17□□□□□ -0.14
ATG4B-218ENST00000479554 MPSTP25325 297 aa14.17□□□□□ -0.14
ATG4B-218ENST00000479554 PTPN3P26045 913 aa14.17□□□□□ -0.14
ATG4B-218ENST00000479554 CSTF2P33240 577 aaKnown RBP eCLIP14.17□□□□□ -0.14
ATG4B-218ENST00000479554 CDKN2BP42772 138 aa14.17□□□□□ -0.14
ATG4B-218ENST00000479554 SRSF6Q13247 344 aaKnown RBP14.17□□□□□ -0.14
ATG4B-218ENST00000479554 NFATC2Q13469 925 aa14.17□□□□□ -0.14
ATG4B-218ENST00000479554 LY6DQ14210 128 aa14.17□□□□□ -0.14
ATG4B-218ENST00000479554 PRKD1Q15139 912 aaPredicted RBP14.17□□□□□ -0.14
ATG4B-218ENST00000479554 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.17□□□□□ -0.14
ATG4B-218ENST00000479554 KAZNQ674X7 775 aa14.17□□□□□ -0.14
ATG4B-218ENST00000479554 PDPK2PQ6A1A2 396 aa14.17□□□□□ -0.14
ATG4B-218ENST00000479554 TMEM71Q6P5X7 295 aa14.17□□□□□ -0.14
ATG4B-218ENST00000479554 TMC3Q7Z5M5 1100 aa14.17□□□□□ -0.14
ATG4B-218ENST00000479554 TRAM1L1Q8N609 369 aa14.17□□□□□ -0.14
ATG4B-218ENST00000479554 TFB1MQ8WVM0 346 aaKnown RBP14.17□□□□□ -0.14
ATG4B-218ENST00000479554 SH3KBP1Q96B97 665 aa14.17□□□□□ -0.14
ATG4B-218ENST00000479554 SGF29Q96ES7 293 aa14.17□□□□□ -0.14
ATG4B-218ENST00000479554 TEKT5Q96M29 485 aa14.17□□□□□ -0.14
ATG4B-218ENST00000479554 TAAR9Q96RI9 348 aa14.17□□□□□ -0.14
ATG4B-218ENST00000479554 OR2AG1Q9H205 316 aa14.17□□□□□ -0.14
ATG4B-218ENST00000479554 SARS2Q9NP81 518 aaKnown RBP14.17□□□□□ -0.14
ATG4B-218ENST00000479554 TMEM9Q9P0T7 183 aa14.17□□□□□ -0.14
ATG4B-218ENST00000479554 ATXN10Q9UBB4 475 aa14.17□□□□□ -0.14
ATG4B-218ENST00000479554 SAE1Q9UBE0 346 aaPredicted RBP14.17□□□□□ -0.14
ATG4B-218ENST00000479554 GUCA1BQ9UMX6 200 aa14.17□□□□□ -0.14
ATG4B-218ENST00000479554 A6NCN8 305 aa14.16□□□□□ -0.14
ATG4B-218ENST00000479554 GPR89AB7ZAQ6 455 aa14.16□□□□□ -0.14
ATG4B-218ENST00000479554 STMND1H3BQB6 276 aa14.16□□□□□ -0.14
ATG4B-218ENST00000479554 GPR89BP0CG08 455 aa14.16□□□□□ -0.14
ATG4B-218ENST00000479554 FGF3P11487 239 aaPredicted RBP14.16□□□□□ -0.14
ATG4B-218ENST00000479554 F3P13726 295 aa14.16□□□□□ -0.14
ATG4B-218ENST00000479554 PECAM1P16284 738 aaPredicted RBP14.16□□□□□ -0.14
ATG4B-218ENST00000479554 ZNF8P17098 575 aaPredicted RBP14.16□□□□□ -0.14
ATG4B-218ENST00000479554 TNNT3P45378 269 aaPredicted RBP14.16□□□□□ -0.14
ATG4B-218ENST00000479554 HADHBP55084 474 aaKnown RBP14.16□□□□□ -0.14
ATG4B-218ENST00000479554 LLGL1Q15334 1064 aa14.16□□□□□ -0.14
ATG4B-218ENST00000479554 TAZQ16635 292 aa14.16□□□□□ -0.14
ATG4B-218ENST00000479554 IYDQ6PHW0 289 aa14.16□□□□□ -0.14
ATG4B-218ENST00000479554 SPOCD1Q6ZMY3 1216 aa14.16□□□□□ -0.14
ATG4B-218ENST00000479554 SLC9B2Q86UD5 537 aa14.16□□□□□ -0.14
ATG4B-218ENST00000479554 VASH2Q86V25 355 aa14.16□□□□□ -0.14
ATG4B-218ENST00000479554 FAM129CQ86XR2 697 aa14.16□□□□□ -0.14
ATG4B-218ENST00000479554 DTX1Q86Y01 620 aa14.16□□□□□ -0.14
ATG4B-218ENST00000479554 AVL9Q8NBF6 648 aa14.16□□□□□ -0.14
ATG4B-218ENST00000479554 GLYATL1Q969I3 302 aa14.16□□□□□ -0.14
ATG4B-218ENST00000479554 SRPK1Q96SB4 655 aaKnown RBP14.16□□□□□ -0.14
ATG4B-218ENST00000479554 SEMA4CQ9C0C4 833 aa14.16□□□□□ -0.14
ATG4B-218ENST00000479554 LACRTQ9GZZ8 138 aa14.16□□□□□ -0.14
ATG4B-218ENST00000479554 GOLPH3Q9H4A6 298 aa14.16□□□□□ -0.14
ATG4B-218ENST00000479554 OSGEPL1Q9H4B0 414 aa14.16□□□□□ -0.14
ATG4B-218ENST00000479554 UBP1Q9NZI7 540 aa14.16□□□□□ -0.14
ATG4B-218ENST00000479554 ALG6Q9Y672 507 aa14.16□□□□□ -0.14
ATG4B-218ENST00000479554 BOD1L1Q8NFC6 3051 aa14.16□□□□□ -0.14
ATG4B-218ENST00000479554 AHCTF1Q8WYP5 2266 aa14.16□□□□□ -0.14
ATG4B-218ENST00000479554 HELZ2Q9BYK8 2649 aaKnown RBP14.15□□□□□ -0.14
ATG4B-218ENST00000479554 KIR2DS5A0A0G2JLQ3 304 aa14.15□□□□□ -0.14
ATG4B-218ENST00000479554 A0A0G2JNG1 304 aa14.15□□□□□ -0.14
ATG4B-218ENST00000479554 RCCD1A6NED2 376 aa14.15□□□□□ -0.14
ATG4B-218ENST00000479554 OR5K4A6NMS3 321 aa14.15□□□□□ -0.14
ATG4B-218ENST00000479554 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.15□□□□□ -0.14
ATG4B-218ENST00000479554 KIR2DS3K7RE56 304 aa14.15□□□□□ -0.14
ATG4B-218ENST00000479554 MTSS1O43312 755 aa14.15□□□□□ -0.14
ATG4B-218ENST00000479554 BPIP17213 487 aa14.15□□□□□ -0.14
ATG4B-218ENST00000479554 MAPK9P45984 424 aa14.15□□□□□ -0.14
ATG4B-218ENST00000479554 EPHA4P54764 986 aa14.15□□□□□ -0.14
ATG4B-218ENST00000479554 KIR2DS5Q14953 304 aa14.15□□□□□ -0.14
ATG4B-218ENST00000479554 INSCQ1MX18 579 aa14.15□□□□□ -0.14
ATG4B-218ENST00000479554 PLA2G4EQ3MJ16 856 aa14.15□□□□□ -0.14
ATG4B-218ENST00000479554 TFDP3Q5H9I0 405 aa14.15□□□□□ -0.14
ATG4B-218ENST00000479554 SNAP47Q5SQN1 464 aa14.15□□□□□ -0.14
ATG4B-218ENST00000479554 ZNF648Q5T619 568 aaPredicted RBP14.15□□□□□ -0.14
ATG4B-218ENST00000479554 CRTC3Q6UUV7 619 aa14.15□□□□□ -0.14
ATG4B-218ENST00000479554 ADGRG6Q86SQ4 1221 aa14.15□□□□□ -0.14
ATG4B-218ENST00000479554 ZNF605Q86T29 641 aa14.15□□□□□ -0.14
ATG4B-218ENST00000479554 CCDC50Q8IVM0 306 aa14.15□□□□□ -0.14
ATG4B-218ENST00000479554 KATNAL2Q8IYT4 538 aa14.15□□□□□ -0.14
ATG4B-218ENST00000479554 P3H4Q92791 437 aa14.15□□□□□ -0.14
ATG4B-218ENST00000479554 ART4Q93070 314 aa14.15□□□□□ -0.14
ATG4B-218ENST00000479554 PMEPA1Q969W9 287 aa14.15□□□□□ -0.14
ATG4B-218ENST00000479554 DDA1Q9BW61 102 aa14.15□□□□□ -0.14
ATG4B-218ENST00000479554 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms