RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 PSMD8P48556 350 aa6.21□□□□□ -1.42
SF3B1-209ENST00000479532 CSNK1DP48730 415 aa6.21□□□□□ -1.42
SF3B1-209ENST00000479532 SCNN1BP51168 640 aa6.21□□□□□ -1.42
SF3B1-209ENST00000479532 CLCN7P51798 805 aa6.21□□□□□ -1.42
SF3B1-209ENST00000479532 CCNHP51946 323 aaPredicted RBP6.21□□□□□ -1.42
SF3B1-209ENST00000479532 CLNS1AP54105 237 aaKnown RBP6.21□□□□□ -1.42
SF3B1-209ENST00000479532 PCBP3P57721 371 aaKnown RBP6.21□□□□□ -1.42
SF3B1-209ENST00000479532 AP1S1P61966 158 aa6.21□□□□□ -1.42
SF3B1-209ENST00000479532 IFI35P80217 286 aaPredicted RBP6.21□□□□□ -1.42
SF3B1-209ENST00000479532 CSTF1Q05048 431 aaKnown RBP6.21□□□□□ -1.42
SF3B1-209ENST00000479532 CKAP4Q07065 602 aaKnown RBP6.21□□□□□ -1.42
SF3B1-209ENST00000479532 BCL2L1Q07817 233 aa6.21□□□□□ -1.42
SF3B1-209ENST00000479532 ACTN3Q08043 901 aaPredicted RBP6.21□□□□□ -1.42
SF3B1-209ENST00000479532 SLC10A7Q0GE19 358 aa6.21□□□□□ -1.42
SF3B1-209ENST00000479532 DYNC1I2Q13409 638 aaKnown RBP6.21□□□□□ -1.42
SF3B1-209ENST00000479532 CASP8Q14790 479 aa6.21□□□□□ -1.42
SF3B1-209ENST00000479532 PRKD1Q15139 912 aaPredicted RBP6.21□□□□□ -1.42
SF3B1-209ENST00000479532 CYTH1Q15438 398 aa6.21□□□□□ -1.42
SF3B1-209ENST00000479532 CCNG2Q16589 344 aa6.21□□□□□ -1.42
SF3B1-209ENST00000479532 WHAMMP3Q1A5X7 153 aa6.21□□□□□ -1.42
SF3B1-209ENST00000479532 MYLK3Q32MK0 819 aa6.21□□□□□ -1.42
SF3B1-209ENST00000479532 ZNF528Q3MIS6 628 aa6.21□□□□□ -1.42
SF3B1-209ENST00000479532 USP39Q53GS9 565 aaKnown RBP6.21□□□□□ -1.42
SF3B1-209ENST00000479532 C9orf64Q5T6V5 341 aa6.21□□□□□ -1.42
SF3B1-209ENST00000479532 ANO7Q6IWH7 933 aa6.21□□□□□ -1.42
SF3B1-209ENST00000479532 PKN3Q6P5Z2 889 aa6.21□□□□□ -1.42
SF3B1-209ENST00000479532 ZC3H14Q6PJT7 736 aaKnown RBP6.21□□□□□ -1.42
SF3B1-209ENST00000479532 C4orf22Q6V702 233 aa6.21□□□□□ -1.42
SF3B1-209ENST00000479532 DPY19L3Q6ZPD9 716 aa6.21□□□□□ -1.42
SF3B1-209ENST00000479532 PID1Q7Z2X4 250 aa6.21□□□□□ -1.42
SF3B1-209ENST00000479532 SPATA21Q7Z572 469 aa6.21□□□□□ -1.42
SF3B1-209ENST00000479532 KBTBD6Q86V97 674 aa6.21□□□□□ -1.42
SF3B1-209ENST00000479532 TMPRSS6Q8IU80 811 aa6.21□□□□□ -1.42
SF3B1-209ENST00000479532 MMAAQ8IVH4 418 aaKnown RBP6.21□□□□□ -1.42
SF3B1-209ENST00000479532 PPIL6Q8IXY8 311 aa6.21□□□□□ -1.42
SF3B1-209ENST00000479532 NDUFAF2Q8N183 169 aa6.21□□□□□ -1.42
SF3B1-209ENST00000479532 STK40Q8N2I9 435 aa6.21□□□□□ -1.42
SF3B1-209ENST00000479532 SDR16C5Q8N3Y7 309 aa6.21□□□□□ -1.42
SF3B1-209ENST00000479532 TEX26Q8N6G2 289 aa6.21□□□□□ -1.42
SF3B1-209ENST00000479532 TEX9Q8N6V9 391 aa6.21□□□□□ -1.42
SF3B1-209ENST00000479532 CCDC89Q8N998 374 aa6.21□□□□□ -1.42
SF3B1-209ENST00000479532 TMIEQ8NEW7 156 aa6.21□□□□□ -1.42
SF3B1-209ENST00000479532 OR2A12Q8NGT7 310 aa6.21□□□□□ -1.42
SF3B1-209ENST00000479532 FAM76AQ8TAV0 307 aa6.21□□□□□ -1.42
SF3B1-209ENST00000479532 PIP4K2CQ8TBX8 421 aa6.21□□□□□ -1.42
SF3B1-209ENST00000479532 CHAC2Q8WUX2 184 aa6.21□□□□□ -1.42
SF3B1-209ENST00000479532 UBE2FQ969M7 185 aa6.21□□□□□ -1.42
SF3B1-209ENST00000479532 LIN37Q96GY3 246 aaPredicted RBP6.21□□□□□ -1.42
SF3B1-209ENST00000479532 CAPZA3Q96KX2 299 aa6.21□□□□□ -1.42
SF3B1-209ENST00000479532 ZNF641Q96N77 438 aaPredicted RBP6.21□□□□□ -1.42
SF3B1-209ENST00000479532 PLEKHG4BQ96PX9 1271 aa6.21□□□□□ -1.42
SF3B1-209ENST00000479532 NUDCD1Q96RS6 583 aa6.21□□□□□ -1.42
SF3B1-209ENST00000479532 TUBGCP5Q96RT8 1024 aa6.21□□□□□ -1.42
SF3B1-209ENST00000479532 OMDQ99983 421 aa6.21□□□□□ -1.42
SF3B1-209ENST00000479532 MGME1Q9BQP7 344 aa6.21□□□□□ -1.42
SF3B1-209ENST00000479532 FOXP3Q9BZS1 431 aa6.21□□□□□ -1.42
SF3B1-209ENST00000479532 RSPH9Q9H1X1 276 aaPredicted RBP6.21□□□□□ -1.42
SF3B1-209ENST00000479532 EBF2Q9HAK2 575 aa6.21□□□□□ -1.42
SF3B1-209ENST00000479532 PRSS16Q9NQE7 514 aa6.21□□□□□ -1.42
SF3B1-209ENST00000479532 PRMT8Q9NR22 394 aaPredicted RBP6.21□□□□□ -1.42
SF3B1-209ENST00000479532 KLC4Q9NSK0 619 aa6.21□□□□□ -1.42
SF3B1-209ENST00000479532 SAE1Q9UBE0 346 aaPredicted RBP6.21□□□□□ -1.42
SF3B1-209ENST00000479532 EBF1Q9UH73 591 aa6.21□□□□□ -1.42
SF3B1-209ENST00000479532 TCFL5Q9UL49 500 aa6.21□□□□□ -1.42
SF3B1-209ENST00000479532 TTC7AQ9ULT0 858 aaPredicted RBP6.21□□□□□ -1.42
SF3B1-209ENST00000479532 ZNF148Q9UQR1 794 aa6.21□□□□□ -1.42
SF3B1-209ENST00000479532 TRAF6Q9Y4K3 522 aa6.21□□□□□ -1.42
SF3B1-209ENST00000479532 ANKRD36A6QL64 1941 aa6.21□□□□□ -1.42
SF3B1-209ENST00000479532 CCDC188H7C350 402 aa6.2□□□□□ -1.42
SF3B1-209ENST00000479532 KCNK1O00180 336 aa6.2□□□□□ -1.42
SF3B1-209ENST00000479532 RNF103O00237 685 aa6.2□□□□□ -1.42
SF3B1-209ENST00000479532 KPNA3O00505 521 aaPredicted RBP6.2□□□□□ -1.42
SF3B1-209ENST00000479532 INSIG1O15503 277 aa6.2□□□□□ -1.42
SF3B1-209ENST00000479532 ZSCAN9O15535 394 aaPredicted RBP6.2□□□□□ -1.42
SF3B1-209ENST00000479532 SLC7A4O43246 635 aa6.2□□□□□ -1.42
SF3B1-209ENST00000479532 OPHN1O60890 802 aa6.2□□□□□ -1.42
SF3B1-209ENST00000479532 SOCS5O75159 536 aa6.2□□□□□ -1.42
SF3B1-209ENST00000479532 NDUFS2O75306 463 aa6.2□□□□□ -1.42
SF3B1-209ENST00000479532 ANXA9O76027 345 aa6.2□□□□□ -1.42
SF3B1-209ENST00000479532 URI1O94763 535 aaPredicted RBP6.2□□□□□ -1.42
SF3B1-209ENST00000479532 ZNF205O95201 554 aa6.2□□□□□ -1.42
SF3B1-209ENST00000479532 CD160O95971 181 aa6.2□□□□□ -1.42
SF3B1-209ENST00000479532 GABRG2P18507 467 aa6.2□□□□□ -1.42
SF3B1-209ENST00000479532 PTPN3P26045 913 aa6.2□□□□□ -1.42
SF3B1-209ENST00000479532 RBL1P28749 1068 aa6.2□□□□□ -1.42
SF3B1-209ENST00000479532 CNR2P34972 360 aa6.2□□□□□ -1.42
SF3B1-209ENST00000479532 SEPHS1P49903 392 aa6.2□□□□□ -1.42
SF3B1-209ENST00000479532 SUOXP51687 545 aa6.2□□□□□ -1.42
SF3B1-209ENST00000479532 COPAP53621 1224 aa6.2□□□□□ -1.42
SF3B1-209ENST00000479532 EPHB1P54762 984 aa6.2□□□□□ -1.42
SF3B1-209ENST00000479532 MAXP61244 160 aa6.2□□□□□ -1.42
SF3B1-209ENST00000479532 RPS14P62263 151 aaKnown RBP6.2□□□□□ -1.42
SF3B1-209ENST00000479532 POLR2LP62875 67 aaKnown RBP6.2□□□□□ -1.42
SF3B1-209ENST00000479532 SNX1Q13596 522 aa6.2□□□□□ -1.42
SF3B1-209ENST00000479532 ANGPT1Q15389 498 aa6.2□□□□□ -1.42
SF3B1-209ENST00000479532 CST6Q15828 149 aa6.2□□□□□ -1.42
SF3B1-209ENST00000479532 P3H1Q32P28 736 aa6.2□□□□□ -1.42
SF3B1-209ENST00000479532 TEX44Q53QW1 395 aa6.2□□□□□ -1.42
SF3B1-209ENST00000479532 ZNF805Q5CZA5 627 aa6.2□□□□□ -1.42
SF3B1-209ENST00000479532 ATXN7L2Q5T6C5 722 aaPredicted RBP6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms