RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 TAAR2Q9P1P5 351 aa15.29■□□□□ 0.04
C9orf3-217ENST00000479161 ZNHIT2Q9UHR6 403 aa15.29■□□□□ 0.04
C9orf3-217ENST00000479161 ST14Q9Y5Y6 855 aa15.29■□□□□ 0.04
C9orf3-217ENST00000479161 IGLV3-16A0A075B6K0 115 aa15.28■□□□□ 0.04
C9orf3-217ENST00000479161 OR5K4A6NMS3 321 aa15.28■□□□□ 0.04
C9orf3-217ENST00000479161 CCDC188H7C350 402 aa15.28■□□□□ 0.04
C9orf3-217ENST00000479161 ZNF185O15231 689 aa15.28■□□□□ 0.04
C9orf3-217ENST00000479161 TCEA3O75764 348 aa15.28■□□□□ 0.04
C9orf3-217ENST00000479161 KRT14P02533 472 aa15.28■□□□□ 0.04
C9orf3-217ENST00000479161 MLNP12872 115 aa15.28■□□□□ 0.04
C9orf3-217ENST00000479161 SLC2A4P14672 509 aa15.28■□□□□ 0.04
C9orf3-217ENST00000479161 ITGALP20701 1170 aa15.28■□□□□ 0.04
C9orf3-217ENST00000479161 DMPKQ09013 629 aa15.28■□□□□ 0.04
C9orf3-217ENST00000479161 FOXC1Q12948 553 aa15.28■□□□□ 0.04
C9orf3-217ENST00000479161 HLTFQ14527 1009 aaKnown RBP eCLIP15.28■□□□□ 0.04
C9orf3-217ENST00000479161 NR1D2Q14995 579 aa15.28■□□□□ 0.04
C9orf3-217ENST00000479161 CLPPQ16740 277 aaPredicted RBP15.28■□□□□ 0.04
C9orf3-217ENST00000479161 C14orf28Q4W4Y0 310 aa15.28■□□□□ 0.04
C9orf3-217ENST00000479161 CERCAMQ5T4B2 595 aa15.28■□□□□ 0.04
C9orf3-217ENST00000479161 GPRC6AQ5T6X5 926 aa15.28■□□□□ 0.04
C9orf3-217ENST00000479161 CDCP2Q5VXM1 449 aa15.28■□□□□ 0.04
C9orf3-217ENST00000479161 LRRC8BQ6P9F7 803 aa15.28■□□□□ 0.04
C9orf3-217ENST00000479161 DOK6Q6PKX4 331 aa15.28■□□□□ 0.04
C9orf3-217ENST00000479161 WASH2PQ6VEQ5 465 aa15.28■□□□□ 0.04
C9orf3-217ENST00000479161 CCNI2Q6ZMN8 369 aaPredicted RBP15.28■□□□□ 0.04
C9orf3-217ENST00000479161 SYDE1Q6ZW31 735 aaPredicted RBP15.28■□□□□ 0.04
C9orf3-217ENST00000479161 ZNF438Q7Z4V0 828 aa15.28■□□□□ 0.04
C9orf3-217ENST00000479161 LRRTM4Q86VH4 590 aa15.28■□□□□ 0.04
C9orf3-217ENST00000479161 CHCHD4Q8N4Q1 142 aa15.28■□□□□ 0.04
C9orf3-217ENST00000479161 AVL9Q8NBF6 648 aa15.28■□□□□ 0.04
C9orf3-217ENST00000479161 MCUQ8NE86 351 aa15.28■□□□□ 0.04
C9orf3-217ENST00000479161 OR13C4Q8NGS5 318 aa15.28■□□□□ 0.04
C9orf3-217ENST00000479161 CCL4L1Q8NHW4 92 aa15.28■□□□□ 0.04
C9orf3-217ENST00000479161 TTC25Q96NG3 672 aa15.28■□□□□ 0.04
C9orf3-217ENST00000479161 SCNM1Q9BWG6 230 aa15.28■□□□□ 0.04
C9orf3-217ENST00000479161 OR2AG1Q9H205 316 aa15.28■□□□□ 0.04
C9orf3-217ENST00000479161 DPEP2Q9H4A9 486 aa15.28■□□□□ 0.04
C9orf3-217ENST00000479161 ASB8Q9H765 288 aa15.28■□□□□ 0.04
C9orf3-217ENST00000479161 WASH6PQ9NQA3 447 aa15.28■□□□□ 0.04
C9orf3-217ENST00000479161 SPATS2LQ9NUQ6 558 aaKnown RBP15.28■□□□□ 0.04
C9orf3-217ENST00000479161 GPSM3Q9Y4H4 160 aa15.28■□□□□ 0.04
C9orf3-217ENST00000479161 KCTD3Q9Y597 815 aa15.28■□□□□ 0.04
C9orf3-217ENST00000479161 ZW10O43264 779 aa15.27■□□□□ 0.04
C9orf3-217ENST00000479161 BUD23O43709 281 aaKnown RBP15.27■□□□□ 0.04
C9orf3-217ENST00000479161 OPA1O60313 960 aa15.27■□□□□ 0.04
C9orf3-217ENST00000479161 UGT1A9O60656 530 aa15.27■□□□□ 0.04
C9orf3-217ENST00000479161 GSTM1P09488 218 aa15.27■□□□□ 0.04
C9orf3-217ENST00000479161 TPH1P17752 444 aa15.27■□□□□ 0.04
C9orf3-217ENST00000479161 UGT1A6P19224 532 aa15.27■□□□□ 0.04
C9orf3-217ENST00000479161 UGT1A1P22309 533 aa15.27■□□□□ 0.04
C9orf3-217ENST00000479161 UGT1A4P22310 534 aa15.27■□□□□ 0.04
C9orf3-217ENST00000479161 UGT1A3P35503 534 aa15.27■□□□□ 0.04
C9orf3-217ENST00000479161 UGT1A5P35504 534 aa15.27■□□□□ 0.04
C9orf3-217ENST00000479161 PAFAH1B1P43034 410 aa15.27■□□□□ 0.04
C9orf3-217ENST00000479161 GPR3P46089 330 aa15.27■□□□□ 0.04
C9orf3-217ENST00000479161 FASLGP48023 281 aa15.27■□□□□ 0.04
C9orf3-217ENST00000479161 BASP1P80723 227 aaKnown RBP15.27■□□□□ 0.04
C9orf3-217ENST00000479161 GSTM4Q03013 218 aa15.27■□□□□ 0.04
C9orf3-217ENST00000479161 GTF2H3Q13889 308 aa15.27■□□□□ 0.04
C9orf3-217ENST00000479161 KCNJ11Q14654 390 aa15.27■□□□□ 0.04
C9orf3-217ENST00000479161 PTPRCAPQ14761 206 aa15.27■□□□□ 0.04
C9orf3-217ENST00000479161 POU6F1Q14863 301 aa15.27■□□□□ 0.04
C9orf3-217ENST00000479161 PCID2Q5JVF3 399 aa15.27■□□□□ 0.04
C9orf3-217ENST00000479161 PRUNE1Q86TP1 453 aa15.27■□□□□ 0.04
C9orf3-217ENST00000479161 ZNF547Q8IVP9 402 aa15.27■□□□□ 0.04
C9orf3-217ENST00000479161 NXPE1Q8N323 547 aa15.27■□□□□ 0.04
C9orf3-217ENST00000479161 PNPLA1Q8N8W4 532 aa15.27■□□□□ 0.04
C9orf3-217ENST00000479161 DCBLD1Q8N8Z6 715 aa15.27■□□□□ 0.04
C9orf3-217ENST00000479161 IFI44Q8TCB0 444 aa15.27■□□□□ 0.04
C9orf3-217ENST00000479161 ZDHHC1Q8WTX9 485 aa15.27■□□□□ 0.04
C9orf3-217ENST00000479161 LINC00615Q96LM1 132 aaPredicted RBP15.27■□□□□ 0.04
C9orf3-217ENST00000479161 UGT1A7Q9HAW7 530 aa15.27■□□□□ 0.04
C9orf3-217ENST00000479161 UGT1A10Q9HAW8 530 aa15.27■□□□□ 0.04
C9orf3-217ENST00000479161 UGT1A8Q9HAW9 530 aa15.27■□□□□ 0.04
C9orf3-217ENST00000479161 MRM3Q9HC36 420 aaKnown RBP15.27■□□□□ 0.04
C9orf3-217ENST00000479161 BFARQ9NZS9 450 aa15.27■□□□□ 0.04
C9orf3-217ENST00000479161 FKBPLQ9UIM3 349 aa15.27■□□□□ 0.04
C9orf3-217ENST00000479161 SLC30A1Q9Y6M5 507 aa15.27■□□□□ 0.04
C9orf3-217ENST00000479161 KIR2DS5A0A0G2JLQ3 304 aa15.26■□□□□ 0.03
C9orf3-217ENST00000479161 A0A0G2JNG1 304 aa15.26■□□□□ 0.03
C9orf3-217ENST00000479161 A6NCN8 305 aa15.26■□□□□ 0.03
C9orf3-217ENST00000479161 KIR2DS3K7RE56 304 aa15.26■□□□□ 0.03
C9orf3-217ENST00000479161 HYAL3O43820 417 aaPredicted RBP15.26■□□□□ 0.03
C9orf3-217ENST00000479161 ECEL1O95672 775 aa15.26■□□□□ 0.03
C9orf3-217ENST00000479161 TUBB4AP04350 444 aa15.26■□□□□ 0.03
C9orf3-217ENST00000479161 RALBP11234 206 aa15.26■□□□□ 0.03
C9orf3-217ENST00000479161 ZNF7P17097 686 aaPredicted RBP15.26■□□□□ 0.03
C9orf3-217ENST00000479161 VCLP18206 1134 aa15.26■□□□□ 0.03
C9orf3-217ENST00000479161 AK4P27144 223 aaPredicted RBP15.26■□□□□ 0.03
C9orf3-217ENST00000479161 ACTR1BP42025 376 aa15.26■□□□□ 0.03
C9orf3-217ENST00000479161 GRIA1P42261 906 aa15.26■□□□□ 0.03
C9orf3-217ENST00000479161 ACTR1AP61163 376 aa15.26■□□□□ 0.03
C9orf3-217ENST00000479161 INSM1Q01101 510 aaPredicted RBP15.26■□□□□ 0.03
C9orf3-217ENST00000479161 CACNG1Q06432 222 aa15.26■□□□□ 0.03
C9orf3-217ENST00000479161 GPS1Q13098 491 aa15.26■□□□□ 0.03
C9orf3-217ENST00000479161 SQSTM1Q13501 440 aa15.26■□□□□ 0.03
C9orf3-217ENST00000479161 KIR2DS5Q14953 304 aa15.26■□□□□ 0.03
C9orf3-217ENST00000479161 KHDC1Q4VXA5 237 aaKnown RBP15.26■□□□□ 0.03
C9orf3-217ENST00000479161 TSTD2Q5T7W7 516 aa15.26■□□□□ 0.03
C9orf3-217ENST00000479161 AGAP9Q5VTM2 703 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms