RNA–Protein interactions for RNA: ENST00000478469.5

PCCB-214, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 1 (best) BASIC

Gene PCCB, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-214ENST00000478469 ZNF805Q5CZA5 627 aa11.93□□□□□ -0.5
PCCB-214ENST00000478469 RSPO2Q6UXX9 243 aaPredicted RBP11.93□□□□□ -0.5
PCCB-214ENST00000478469 Q6ZVL8 140 aa11.93□□□□□ -0.5
PCCB-214ENST00000478469 CNTD1Q8N815 330 aa11.93□□□□□ -0.5
PCCB-214ENST00000478469 JADE3Q92613 823 aa11.93□□□□□ -0.5
PCCB-214ENST00000478469 RTP4Q96DX8 246 aa11.93□□□□□ -0.5
PCCB-214ENST00000478469 GREB1LQ9C091 1923 aaPredicted RBP11.93□□□□□ -0.5
PCCB-214ENST00000478469 WDR26Q9H7D7 661 aa11.93□□□□□ -0.5
PCCB-214ENST00000478469 ATP6AP2A0A1C7CYW4 349 aa11.92□□□□□ -0.5
PCCB-214ENST00000478469 DRGXA6NNA5 263 aa11.92□□□□□ -0.5
PCCB-214ENST00000478469 C16orf96A6NNT2 1141 aa11.92□□□□□ -0.5
PCCB-214ENST00000478469 RFXAPO00287 272 aa11.92□□□□□ -0.5
PCCB-214ENST00000478469 ATP6AP2O75787 350 aa11.92□□□□□ -0.5
PCCB-214ENST00000478469 CPSF4O95639 269 aaKnown RBP11.92□□□□□ -0.5
PCCB-214ENST00000478469 GSRP00390 522 aa11.92□□□□□ -0.5
PCCB-214ENST00000478469 F11P03951 625 aa11.92□□□□□ -0.5
PCCB-214ENST00000478469 PRKCHP24723 683 aa11.92□□□□□ -0.5
PCCB-214ENST00000478469 SLC6A4P31645 630 aa11.92□□□□□ -0.5
PCCB-214ENST00000478469 IRS1P35568 1242 aa11.92□□□□□ -0.5
PCCB-214ENST00000478469 CNTN1Q12860 1018 aa11.92□□□□□ -0.5
PCCB-214ENST00000478469 TSNQ15631 228 aaKnown RBP11.92□□□□□ -0.5
PCCB-214ENST00000478469 GAREM2Q75VX8 874 aa11.92□□□□□ -0.5
PCCB-214ENST00000478469 ZC3HC1Q86WB0 502 aaKnown RBP11.92□□□□□ -0.5
PCCB-214ENST00000478469 RELL1Q8IUW5 271 aa11.92□□□□□ -0.5
PCCB-214ENST00000478469 POU5F2Q8N7G0 328 aa11.92□□□□□ -0.5
PCCB-214ENST00000478469 SIDT2Q8NBJ9 832 aaKnown RBP11.92□□□□□ -0.5
PCCB-214ENST00000478469 DTX3LQ8TDB6 740 aa11.92□□□□□ -0.5
PCCB-214ENST00000478469 KHSRPQ92945 711 aaKnown RBP eCLIP11.92□□□□□ -0.53e-9■■■□□ 16.1
PCCB-214ENST00000478469 MAGEB10Q96LZ2 347 aaPredicted RBP11.92□□□□□ -0.5
PCCB-214ENST00000478469 SH3GL1Q99961 368 aa11.92□□□□□ -0.5
PCCB-214ENST00000478469 SLC12A4Q9UP95 1085 aa11.92□□□□□ -0.5
PCCB-214ENST00000478469 NDUFAF1Q9Y375 327 aa11.92□□□□□ -0.5
PCCB-214ENST00000478469 FAM32AQ9Y421 112 aaKnown RBP11.92□□□□□ -0.5
PCCB-214ENST00000478469 COL11A1P12107 1806 aaPredicted RBP11.92□□□□□ -0.5
PCCB-214ENST00000478469 MMP20O60882 483 aa11.92□□□□□ -0.5
PCCB-214ENST00000478469 HPCAP84074 193 aa11.92□□□□□ -0.5
PCCB-214ENST00000478469 NIPAL4Q0D2K0 466 aa11.92□□□□□ -0.5
PCCB-214ENST00000478469 USP4Q13107 963 aa11.92□□□□□ -0.5
PCCB-214ENST00000478469 PDE1CQ14123 709 aaPredicted RBP11.92□□□□□ -0.5
PCCB-214ENST00000478469 FLOT2Q14254 428 aa11.92□□□□□ -0.5
PCCB-214ENST00000478469 TAF11Q15544 211 aa11.92□□□□□ -0.5
PCCB-214ENST00000478469 SCIMPQ6UWF3 145 aa11.92□□□□□ -0.5
PCCB-214ENST00000478469 BNC2Q6ZN30 1099 aaPredicted RBP11.92□□□□□ -0.5
PCCB-214ENST00000478469 IGDCC3Q8IVU1 814 aa11.92□□□□□ -0.5
PCCB-214ENST00000478469 BANPQ8N9N5 519 aa11.92□□□□□ -0.5
PCCB-214ENST00000478469 KYQ8NBH2 561 aa11.92□□□□□ -0.5
PCCB-214ENST00000478469 QRFPRQ96P65 431 aa11.92□□□□□ -0.5
PCCB-214ENST00000478469 TDRD1Q9BXT4 1180 aaKnown RBP11.92□□□□□ -0.5
PCCB-214ENST00000478469 CEP44Q9C0F1 390 aa11.92□□□□□ -0.5
PCCB-214ENST00000478469 TRAF6Q9Y4K3 522 aa11.92□□□□□ -0.5
PCCB-214ENST00000478469 WASH4PA8MWX3 477 aa11.92□□□□□ -0.5
PCCB-214ENST00000478469 PSMD12O00232 456 aaPredicted RBP11.92□□□□□ -0.5
PCCB-214ENST00000478469 MTX2O75431 263 aa11.92□□□□□ -0.5
PCCB-214ENST00000478469 NAE1Q13564 534 aa11.92□□□□□ -0.5
PCCB-214ENST00000478469 FRG1Q14331 258 aaKnown RBP11.92□□□□□ -0.5
PCCB-214ENST00000478469 PAQR3Q6TCH7 311 aa11.92□□□□□ -0.5
PCCB-214ENST00000478469 AMZ2Q86W34 360 aa11.92□□□□□ -0.5
PCCB-214ENST00000478469 TNIP2Q8NFZ5 429 aa11.92□□□□□ -0.5
PCCB-214ENST00000478469 DCAKDQ8WVC6 231 aa11.92□□□□□ -0.5
PCCB-214ENST00000478469 NT5C3BQ969T7 300 aa11.92□□□□□ -0.5
PCCB-214ENST00000478469 PPP3R2Q96LZ3 170 aa11.92□□□□□ -0.5
PCCB-214ENST00000478469 ATG10Q9H0Y0 220 aa11.92□□□□□ -0.5
PCCB-214ENST00000478469 MAGEE1Q9HCI5 957 aa11.92□□□□□ -0.5
PCCB-214ENST00000478469 E7ESA3 106 aa11.92□□□□□ -0.5
PCCB-214ENST00000478469 TRAFD1O14545 582 aaPredicted RBP11.92□□□□□ -0.5
PCCB-214ENST00000478469 VIPP01282 170 aa11.92□□□□□ -0.5
PCCB-214ENST00000478469 SRPRAP08240 638 aaKnown RBP11.92□□□□□ -0.5
PCCB-214ENST00000478469 IVDP26440 423 aa11.92□□□□□ -0.5
PCCB-214ENST00000478469 ANXA11P50995 505 aaKnown RBP11.92□□□□□ -0.5
PCCB-214ENST00000478469 GTF2A1P52655 376 aaPredicted RBP11.92□□□□□ -0.5
PCCB-214ENST00000478469 CLNS1AP54105 237 aaKnown RBP11.92□□□□□ -0.5
PCCB-214ENST00000478469 EIF2B5Q13144 721 aaKnown RBP11.92□□□□□ -0.5
PCCB-214ENST00000478469 PTPRCAPQ14761 206 aa11.92□□□□□ -0.5
PCCB-214ENST00000478469 CUZD1Q86UP6 607 aa11.92□□□□□ -0.5
PCCB-214ENST00000478469 C17orf64Q86WR6 236 aa11.92□□□□□ -0.5
PCCB-214ENST00000478469 SYT12Q8IV01 421 aa11.92□□□□□ -0.5
PCCB-214ENST00000478469 HID1Q8IV36 788 aa11.92□□□□□ -0.5
PCCB-214ENST00000478469 CLDN19Q8N6F1 224 aa11.92□□□□□ -0.5
PCCB-214ENST00000478469 PEX13Q92968 403 aa11.92□□□□□ -0.5
PCCB-214ENST00000478469 GBP5Q96PP8 586 aa11.92□□□□□ -0.5
PCCB-214ENST00000478469 SLC25A23Q9BV35 468 aa11.92□□□□□ -0.5
PCCB-214ENST00000478469 A0A088AWK7 358 aa11.91□□□□□ -0.5
PCCB-214ENST00000478469 LCHNA4D1U4 455 aa11.91□□□□□ -0.5
PCCB-214ENST00000478469 ZNF10P21506 573 aaPredicted RBP11.91□□□□□ -0.5
PCCB-214ENST00000478469 ITPKAP23677 461 aa11.91□□□□□ -0.5
PCCB-214ENST00000478469 HK2P52789 917 aa11.91□□□□□ -0.5
PCCB-214ENST00000478469 LRRC32Q14392 662 aa11.91□□□□□ -0.5
PCCB-214ENST00000478469 ANO7Q6IWH7 933 aa11.91□□□□□ -0.5
PCCB-214ENST00000478469 FAM162AQ96A26 154 aa11.91□□□□□ -0.5
PCCB-214ENST00000478469 RAD51AP1Q96B01 352 aa11.91□□□□□ -0.5
PCCB-214ENST00000478469 MRM3Q9HC36 420 aaKnown RBP11.91□□□□□ -0.5
PCCB-214ENST00000478469 DNAJC11Q9NVH1 559 aa11.91□□□□□ -0.5
PCCB-214ENST00000478469 NUDT4Q9NZJ9 180 aa11.91□□□□□ -0.5
PCCB-214ENST00000478469 LIMD1Q9UGP4 676 aa11.91□□□□□ -0.5
PCCB-214ENST00000478469 SORCS3Q9UPU3 1222 aa11.91□□□□□ -0.5
PCCB-214ENST00000478469 BTRCQ9Y297 605 aa11.91□□□□□ -0.5
PCCB-214ENST00000478469 ZNFX1Q9P2E3 1918 aaKnown RBP11.91□□□□□ -0.5
PCCB-214ENST00000478469 TRBV23OR9-2A0A075B6M9 112 aa11.91□□□□□ -0.5
PCCB-214ENST00000478469 SGTAO43765 313 aa11.91□□□□□ -0.5
PCCB-214ENST00000478469 HGFP14210 728 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms