RNA–Protein interactions for RNA: ENST00000478223.2

SKI-202, Transcript of SKI proto-oncogene, humanhuman

TSL 3

Gene SKI, Length 294 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKI-202ENST00000478223 PIH1D1Q9NWS0 290 aaKnown RBP11.56□□□□□ -0.56
SKI-202ENST00000478223 PTPRQQ9UMZ3 2332 aa11.56□□□□□ -0.56
SKI-202ENST00000478223 GOLGA6L9A6NEM1 432 aa11.55□□□□□ -0.56
SKI-202ENST00000478223 CCL22O00626 93 aa11.55□□□□□ -0.56
SKI-202ENST00000478223 PTMAP06454 111 aaKnown RBP11.55□□□□□ -0.56
SKI-202ENST00000478223 CCDC175P0C221 793 aa11.55□□□□□ -0.56
SKI-202ENST00000478223 HGFP14210 728 aa11.55□□□□□ -0.56
SKI-202ENST00000478223 ETS1P14921 441 aa11.55□□□□□ -0.56
SKI-202ENST00000478223 PNLIPP16233 465 aa11.55□□□□□ -0.56
SKI-202ENST00000478223 ITPKBP27987 946 aa11.55□□□□□ -0.56
SKI-202ENST00000478223 CSF2RBP32927 897 aa11.55□□□□□ -0.56
SKI-202ENST00000478223 SPAM1P38567 509 aa11.55□□□□□ -0.56
SKI-202ENST00000478223 CFHR1Q03591 330 aa11.55□□□□□ -0.56
SKI-202ENST00000478223 NR1D2Q14995 579 aa11.55□□□□□ -0.56
SKI-202ENST00000478223 COL28A1Q2UY09 1125 aa11.55□□□□□ -0.56
SKI-202ENST00000478223 TBC1D25Q3MII6 688 aa11.55□□□□□ -0.56
SKI-202ENST00000478223 SEL1L2Q5TEA6 688 aa11.55□□□□□ -0.56
SKI-202ENST00000478223 NKAIN2Q5VXU1 208 aa11.55□□□□□ -0.56
SKI-202ENST00000478223 PDPK2PQ6A1A2 396 aa11.55□□□□□ -0.56
SKI-202ENST00000478223 FOXR1Q6PIV2 292 aa11.55□□□□□ -0.56
SKI-202ENST00000478223 ZNF574Q6ZN55 896 aaPredicted RBP11.55□□□□□ -0.56
SKI-202ENST00000478223 C11orf96Q7Z7L8 435 aa11.55□□□□□ -0.56
SKI-202ENST00000478223 PHYKPLQ8IUZ5 450 aa11.55□□□□□ -0.56
SKI-202ENST00000478223 GLIS1Q8NBF1 620 aa11.55□□□□□ -0.56
SKI-202ENST00000478223 TTC13Q8NBP0 860 aa11.55□□□□□ -0.56
SKI-202ENST00000478223 OR4K2Q8NGD2 314 aa11.55□□□□□ -0.56
SKI-202ENST00000478223 OR13C4Q8NGS5 318 aa11.55□□□□□ -0.56
SKI-202ENST00000478223 HNRNPLLQ8WVV9 542 aaKnown RBP11.55□□□□□ -0.56
SKI-202ENST00000478223 C1orf54Q8WWF1 131 aa11.55□□□□□ -0.56
SKI-202ENST00000478223 SRPK1Q96SB4 655 aaKnown RBP11.55□□□□□ -0.56
SKI-202ENST00000478223 NUDT22Q9BRQ3 303 aa11.55□□□□□ -0.56
SKI-202ENST00000478223 SEMA6CQ9H3T2 930 aa11.55□□□□□ -0.56
SKI-202ENST00000478223 RMI1Q9H9A7 625 aa11.55□□□□□ -0.56
SKI-202ENST00000478223 POLR1BQ9H9Y6 1135 aa11.55□□□□□ -0.56
SKI-202ENST00000478223 RDH14Q9HBH5 336 aa11.55□□□□□ -0.56
SKI-202ENST00000478223 EPB41L5Q9HCM4 733 aa11.55□□□□□ -0.56
SKI-202ENST00000478223 PRDM8Q9NQV8 689 aa11.55□□□□□ -0.56
SKI-202ENST00000478223 RAD18Q9NS91 495 aa11.55□□□□□ -0.56
SKI-202ENST00000478223 HACD3Q9P035 362 aa11.55□□□□□ -0.56
SKI-202ENST00000478223 SCHIP1Q9P0W5 487 aaPredicted RBP11.55□□□□□ -0.56
SKI-202ENST00000478223 FKBPLQ9UIM3 349 aa11.55□□□□□ -0.56
SKI-202ENST00000478223 PPP2R2CQ9Y2T4 447 aa11.55□□□□□ -0.56
SKI-202ENST00000478223 AAR2Q9Y312 384 aaKnown RBP11.55□□□□□ -0.56
SKI-202ENST00000478223 MGAQ8IWI9 3026 aa11.54□□□□□ -0.56
SKI-202ENST00000478223 GLYATL1P3A0A0U1RQE8 302 aa11.54□□□□□ -0.56
SKI-202ENST00000478223 PRR19A6NJB7 356 aa11.54□□□□□ -0.56
SKI-202ENST00000478223 RHPN2P1A8MT19 583 aa11.54□□□□□ -0.56
SKI-202ENST00000478223 LIASO43766 372 aa11.54□□□□□ -0.56
SKI-202ENST00000478223 SNX2O60749 519 aa11.54□□□□□ -0.56
SKI-202ENST00000478223 STK10O94804 968 aaKnown RBP11.54□□□□□ -0.56
SKI-202ENST00000478223 CD1CP29017 333 aa11.54□□□□□ -0.56
SKI-202ENST00000478223 ALDH4A1P30038 563 aa11.54□□□□□ -0.56
SKI-202ENST00000478223 EIF2S3P41091 472 aaKnown RBP11.54□□□□□ -0.56
SKI-202ENST00000478223 TNNT3P45378 269 aaPredicted RBP11.54□□□□□ -0.56
SKI-202ENST00000478223 LSSP48449 732 aa11.54□□□□□ -0.56
SKI-202ENST00000478223 ZNF140P52738 457 aaPredicted RBP11.54□□□□□ -0.56
SKI-202ENST00000478223 CTSCP53634 463 aa11.54□□□□□ -0.56
SKI-202ENST00000478223 TMPRSS15P98073 1019 aa11.54□□□□□ -0.56
SKI-202ENST00000478223 XIAPP98170 497 aa11.54□□□□□ -0.56
SKI-202ENST00000478223 TMEM115Q12893 351 aaPredicted RBP11.54□□□□□ -0.56
SKI-202ENST00000478223 SNX1Q13596 522 aa11.54□□□□□ -0.56
SKI-202ENST00000478223 PEX6Q13608 980 aa11.54□□□□□ -0.56
SKI-202ENST00000478223 LRP8Q14114 963 aa11.54□□□□□ -0.56
SKI-202ENST00000478223 PRPSAP1Q14558 356 aa11.54□□□□□ -0.56
SKI-202ENST00000478223 RPS6KA1Q15418 735 aa11.54□□□□□ -0.56
SKI-202ENST00000478223 TAF1AQ15573 450 aaPredicted RBP11.54□□□□□ -0.56
SKI-202ENST00000478223 AMZ1Q400G9 498 aa11.54□□□□□ -0.56
SKI-202ENST00000478223 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.54□□□□□ -0.56
SKI-202ENST00000478223 ARHGEF18Q6ZSZ5 1173 aa11.54□□□□□ -0.56
SKI-202ENST00000478223 SLITRK4Q8IW52 837 aa11.54□□□□□ -0.56
SKI-202ENST00000478223 SFRP1Q8N474 314 aa11.54□□□□□ -0.56
SKI-202ENST00000478223 SNIP1Q8TAD8 396 aaKnown RBP11.54□□□□□ -0.56
SKI-202ENST00000478223 WDR48Q8TAF3 677 aa11.54□□□□□ -0.56
SKI-202ENST00000478223 RTP4Q96DX8 246 aa11.54□□□□□ -0.56
SKI-202ENST00000478223 LIN37Q96GY3 246 aaPredicted RBP11.54□□□□□ -0.56
SKI-202ENST00000478223 TLR10Q9BXR5 811 aa11.54□□□□□ -0.56
SKI-202ENST00000478223 KLC4Q9NSK0 619 aa11.54□□□□□ -0.56
SKI-202ENST00000478223 TMEM9Q9P0T7 183 aa11.54□□□□□ -0.56
SKI-202ENST00000478223 DNAJC16Q9Y2G8 782 aa11.54□□□□□ -0.56
SKI-202ENST00000478223 BSNQ9UPA5 3926 aa11.53□□□□□ -0.56
SKI-202ENST00000478223 ATMQ13315 3056 aa11.53□□□□□ -0.56
SKI-202ENST00000478223 A0A087WV48 116 aa11.53□□□□□ -0.56
SKI-202ENST00000478223 IGHV1OR21-1A0A087WYE8 117 aa11.53□□□□□ -0.56
SKI-202ENST00000478223 CCDC187A0A096LP49 1063 aa11.53□□□□□ -0.56
SKI-202ENST00000478223 PRAMEF33A0A0G2JMD5 474 aa11.53□□□□□ -0.56
SKI-202ENST00000478223 STX7O15400 261 aaKnown RBP11.53□□□□□ -0.56
SKI-202ENST00000478223 LDB2O43679 373 aa11.53□□□□□ -0.56
SKI-202ENST00000478223 DXOO77932 396 aaKnown RBP11.53□□□□□ -0.56
SKI-202ENST00000478223 PRAMEF1O95521 474 aa11.53□□□□□ -0.56
SKI-202ENST00000478223 PRSS56P0CW18 603 aa11.53□□□□□ -0.56
SKI-202ENST00000478223 HOXB3P14651 431 aaPredicted RBP11.53□□□□□ -0.56
SKI-202ENST00000478223 TPH1P17752 444 aa11.53□□□□□ -0.56
SKI-202ENST00000478223 LPOP22079 712 aaPredicted RBP11.53□□□□□ -0.56
SKI-202ENST00000478223 CCKBRP32239 447 aa11.53□□□□□ -0.56
SKI-202ENST00000478223 ETV5P41161 510 aa11.53□□□□□ -0.56
SKI-202ENST00000478223 FASLGP48023 281 aa11.53□□□□□ -0.56
SKI-202ENST00000478223 INHBCP55103 352 aa11.53□□□□□ -0.56
SKI-202ENST00000478223 ZFP36L1Q07352 338 aaKnown RBP11.53□□□□□ -0.56
SKI-202ENST00000478223 C16orf72Q14CZ0 275 aa11.53□□□□□ -0.56
SKI-202ENST00000478223 SEPT7Q16181 437 aaKnown RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms