RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 NAGLUP54802 743 aa4.94□□□□□ -1.62
SF3B6-202ENST00000478050 MLLT6P55198 1093 aaPredicted RBP4.94□□□□□ -1.62
SF3B6-202ENST00000478050 WNT3AP56704 352 aa4.94□□□□□ -1.62
SF3B6-202ENST00000478050 TBX4P57082 545 aa4.94□□□□□ -1.62
SF3B6-202ENST00000478050 TAS2R39P59534 338 aa4.94□□□□□ -1.62
SF3B6-202ENST00000478050 IRX1P78414 480 aaPredicted RBP4.94□□□□□ -1.62
SF3B6-202ENST00000478050 MPP1Q00013 466 aa4.94□□□□□ -1.62
SF3B6-202ENST00000478050 PFKPQ01813 784 aa4.94□□□□□ -1.62
SF3B6-202ENST00000478050 YWHAHQ04917 246 aaPredicted RBP4.94□□□□□ -1.62
SF3B6-202ENST00000478050 TNK2Q07912 1038 aa4.94□□□□□ -1.62
SF3B6-202ENST00000478050 NSUN2Q08J23 767 aaKnown RBP eCLIP4.94□□□□□ -1.62
SF3B6-202ENST00000478050 MTA1Q13330 715 aa4.94□□□□□ -1.62
SF3B6-202ENST00000478050 CTBP1Q13363 440 aa4.94□□□□□ -1.62
SF3B6-202ENST00000478050 MSLNQ13421 630 aaPredicted RBP4.94□□□□□ -1.62
SF3B6-202ENST00000478050 LAMB3Q13751 1172 aa4.94□□□□□ -1.62
SF3B6-202ENST00000478050 CYLC2Q14093 348 aaPredicted RBP4.94□□□□□ -1.62
SF3B6-202ENST00000478050 LPIN1Q14693 890 aa4.94□□□□□ -1.62
SF3B6-202ENST00000478050 RFTN1Q14699 578 aaPredicted RBP4.94□□□□□ -1.62
SF3B6-202ENST00000478050 MAPRE2Q15555 327 aa4.94□□□□□ -1.62
SF3B6-202ENST00000478050 SLC14A2Q15849 920 aa4.94□□□□□ -1.62
SF3B6-202ENST00000478050 PSMD5Q16401 504 aa4.94□□□□□ -1.62
SF3B6-202ENST00000478050 FXNQ16595 210 aa4.94□□□□□ -1.62
SF3B6-202ENST00000478050 NFE2Q16621 373 aaPredicted RBP4.94□□□□□ -1.62
SF3B6-202ENST00000478050 FAM83EQ2M2I3 478 aa4.94□□□□□ -1.62
SF3B6-202ENST00000478050 LSM12Q3MHD2 195 aaKnown RBP4.94□□□□□ -1.62
SF3B6-202ENST00000478050 ARL13AQ5H913 290 aaPredicted RBP4.94□□□□□ -1.62
SF3B6-202ENST00000478050 TECRLQ5HYJ1 363 aa4.94□□□□□ -1.62
SF3B6-202ENST00000478050 C9orf50Q5SZB4 431 aa4.94□□□□□ -1.62
SF3B6-202ENST00000478050 SFRP5Q5T4F7 317 aa4.94□□□□□ -1.62
SF3B6-202ENST00000478050 TSTD2Q5T7W7 516 aa4.94□□□□□ -1.62
SF3B6-202ENST00000478050 AGAP9Q5VTM2 703 aa4.94□□□□□ -1.62
SF3B6-202ENST00000478050 ZNF470Q6ECI4 717 aa4.94□□□□□ -1.62
SF3B6-202ENST00000478050 NEPROQ6NW34 567 aa4.94□□□□□ -1.62
SF3B6-202ENST00000478050 KLC3Q6P597 504 aa4.94□□□□□ -1.62
SF3B6-202ENST00000478050 KDELC1Q6UW63 502 aa4.94□□□□□ -1.62
SF3B6-202ENST00000478050 RANBP10Q6VN20 620 aa4.94□□□□□ -1.62
SF3B6-202ENST00000478050 FRMD7Q6ZUT3 714 aa4.94□□□□□ -1.62
SF3B6-202ENST00000478050 DGLUCYQ7Z3D6 616 aa4.94□□□□□ -1.62
SF3B6-202ENST00000478050 SCD5Q86SK9 330 aa4.94□□□□□ -1.62
SF3B6-202ENST00000478050 SDCCAG8Q86SQ7 713 aaPredicted RBP4.94□□□□□ -1.62
SF3B6-202ENST00000478050 LRRTM3Q86VH5 581 aa4.94□□□□□ -1.62
SF3B6-202ENST00000478050 MON1AQ86VX9 555 aa4.94□□□□□ -1.62
SF3B6-202ENST00000478050 SNX32Q86XE0 403 aa4.94□□□□□ -1.62
SF3B6-202ENST00000478050 PDSS2Q86YH6 399 aa4.94□□□□□ -1.62
SF3B6-202ENST00000478050 TMEM126BQ8IUX1 230 aa4.94□□□□□ -1.62
SF3B6-202ENST00000478050 SLC22A9Q8IVM8 553 aa4.94□□□□□ -1.62
SF3B6-202ENST00000478050 DENND6AQ8IWF6 608 aa4.94□□□□□ -1.62
SF3B6-202ENST00000478050 KBTBD2Q8IY47 623 aa4.94□□□□□ -1.62
SF3B6-202ENST00000478050 PGAM4Q8N0Y7 254 aa4.94□□□□□ -1.62
SF3B6-202ENST00000478050 LSMEM2Q8N112 164 aa4.94□□□□□ -1.62
SF3B6-202ENST00000478050 NUP93Q8N1F7 819 aa4.94□□□□□ -1.62
SF3B6-202ENST00000478050 UMODL1-AS1Q8N2C9 162 aa4.94□□□□□ -1.62
SF3B6-202ENST00000478050 LILRB2Q8N423 598 aa4.94□□□□□ -1.62
SF3B6-202ENST00000478050 FSTL5Q8N475 847 aaPredicted RBP4.94□□□□□ -1.62
SF3B6-202ENST00000478050 SLC25A41Q8N5S1 370 aa4.94□□□□□ -1.62
SF3B6-202ENST00000478050 ATP6V0D2Q8N8Y2 350 aa4.94□□□□□ -1.62
SF3B6-202ENST00000478050 KYQ8NBH2 561 aa4.94□□□□□ -1.62
SF3B6-202ENST00000478050 KCT2Q8NC54 265 aa4.94□□□□□ -1.62
SF3B6-202ENST00000478050 CATSPER1Q8NEC5 780 aa4.94□□□□□ -1.62
SF3B6-202ENST00000478050 ACVR1CQ8NER5 493 aa4.94□□□□□ -1.62
SF3B6-202ENST00000478050 CEP70Q8NHQ1 597 aa4.94□□□□□ -1.62
SF3B6-202ENST00000478050 SCAMP5Q8TAC9 235 aa4.94□□□□□ -1.62
SF3B6-202ENST00000478050 SLC26A7Q8TE54 656 aa4.94□□□□□ -1.62
SF3B6-202ENST00000478050 DLG3Q92796 817 aa4.94□□□□□ -1.62
SF3B6-202ENST00000478050 GAL3ST3Q96A11 431 aa4.94□□□□□ -1.62
SF3B6-202ENST00000478050 NXNL1Q96CM4 212 aa4.94□□□□□ -1.62
SF3B6-202ENST00000478050 IMP4Q96G21 291 aaKnown RBP4.94□□□□□ -1.62
SF3B6-202ENST00000478050 SLC39A13Q96H72 371 aa4.94□□□□□ -1.62
SF3B6-202ENST00000478050 MAELQ96JY0 434 aaKnown RBP4.94□□□□□ -1.62
SF3B6-202ENST00000478050 C8orf48Q96LL4 319 aa4.94□□□□□ -1.62
SF3B6-202ENST00000478050 GPR78Q96P69 363 aa4.94□□□□□ -1.62
SF3B6-202ENST00000478050 PGLYRP2Q96PD5 576 aa4.94□□□□□ -1.62
SF3B6-202ENST00000478050 LENG8Q96PV6 779 aaPredicted RBP4.94□□□□□ -1.62
SF3B6-202ENST00000478050 TRAPPC9Q96Q05 1148 aa4.94□□□□□ -1.62
SF3B6-202ENST00000478050 BTBD9Q96Q07 612 aa4.94□□□□□ -1.62
SF3B6-202ENST00000478050 TMEM209Q96SK2 561 aa4.94□□□□□ -1.62
SF3B6-202ENST00000478050 ADAM2Q99965 735 aa4.94□□□□□ -1.62
SF3B6-202ENST00000478050 ZYG11BQ9C0D3 744 aa4.94□□□□□ -1.62
SF3B6-202ENST00000478050 FAM192AQ9GZU8 254 aa4.94□□□□□ -1.62
SF3B6-202ENST00000478050 ZCWPW1Q9H0M4 648 aa4.94□□□□□ -1.62
SF3B6-202ENST00000478050 TRPV6Q9H1D0 765 aa4.94□□□□□ -1.62
SF3B6-202ENST00000478050 FBXO44Q9H4M3 255 aa4.94□□□□□ -1.62
SF3B6-202ENST00000478050 EFCAB1Q9HAE3 211 aa4.94□□□□□ -1.62
SF3B6-202ENST00000478050 SP110Q9HB58 689 aa4.94□□□□□ -1.62
SF3B6-202ENST00000478050 EML4Q9HC35 981 aaKnown RBP4.94□□□□□ -1.62
SF3B6-202ENST00000478050 TRPC7Q9HCX4 862 aa4.94□□□□□ -1.62
SF3B6-202ENST00000478050 MRPL40Q9NQ50 206 aaKnown RBP4.94□□□□□ -1.62
SF3B6-202ENST00000478050 MAN1C1Q9NR34 630 aa4.94□□□□□ -1.62
SF3B6-202ENST00000478050 OLA1Q9NTK5 396 aaKnown RBP4.94□□□□□ -1.62
SF3B6-202ENST00000478050 TMEM248Q9NWD8 314 aa4.94□□□□□ -1.62
SF3B6-202ENST00000478050 OSER1Q9NX31 292 aa4.94□□□□□ -1.62
SF3B6-202ENST00000478050 CLIC5Q9NZA1 410 aa4.94□□□□□ -1.62
SF3B6-202ENST00000478050 NCKIPSDQ9NZQ3 722 aa4.94□□□□□ -1.62
SF3B6-202ENST00000478050 C6orf203Q9P0P8 240 aaPredicted RBP4.94□□□□□ -1.62
SF3B6-202ENST00000478050 DLGAP2Q9P1A6 1054 aa4.94□□□□□ -1.62
SF3B6-202ENST00000478050 CPSF2Q9P2I0 782 aaKnown RBP4.94□□□□□ -1.62
SF3B6-202ENST00000478050 STK39Q9UEW8 545 aa4.94□□□□□ -1.62
SF3B6-202ENST00000478050 ZDHHC2Q9UIJ5 367 aa4.94□□□□□ -1.62
SF3B6-202ENST00000478050 PSMD13Q9UNM6 376 aa4.94□□□□□ -1.62
SF3B6-202ENST00000478050 SCML2Q9UQR0 700 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms