RNA–Protein interactions for RNA: ENST00000477612.5

COL9A3-211, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-211ENST00000477612 SLC4A1P02730 911 aa21.49■■□□□ 1.03
COL9A3-211ENST00000477612 ITGA2BP08514 1039 aa21.49■■□□□ 1.03
COL9A3-211ENST00000477612 CD1CP29017 333 aa21.49■■□□□ 1.03
COL9A3-211ENST00000477612 MSLNQ13421 630 aaPredicted RBP21.49■■□□□ 1.03
COL9A3-211ENST00000477612 ATP13A5Q4VNC0 1218 aa21.49■■□□□ 1.03
COL9A3-211ENST00000477612 GLT6D1Q7Z4J2 308 aa21.49■■□□□ 1.03
COL9A3-211ENST00000477612 PDZD3Q86UT5 571 aa21.49■■□□□ 1.03
COL9A3-211ENST00000477612 PIM3Q86V86 326 aa21.49■■□□□ 1.03
COL9A3-211ENST00000477612 FBXO39Q8N4B4 442 aa21.49■■□□□ 1.03
COL9A3-211ENST00000477612 SLC37A2Q8TED4 501 aa21.49■■□□□ 1.03
COL9A3-211ENST00000477612 PPP1R2P1Q96PQ5 205 aa21.49■■□□□ 1.03
COL9A3-211ENST00000477612 FAM118BQ9BPY3 351 aa21.49■■□□□ 1.03
COL9A3-211ENST00000477612 EPB41L5Q9HCM4 733 aa21.49■■□□□ 1.03
COL9A3-211ENST00000477612 ARFGAP3Q9NP61 516 aa21.49■■□□□ 1.03
COL9A3-211ENST00000477612 SARS2Q9NP81 518 aaKnown RBP21.49■■□□□ 1.03
COL9A3-211ENST00000477612 IGHV1OR21-1A0A087WYE8 117 aa21.48■■□□□ 1.03
COL9A3-211ENST00000477612 PMS2P1A4D2B8 440 aa21.48■■□□□ 1.03
COL9A3-211ENST00000477612 PRR19A6NJB7 356 aa21.48■■□□□ 1.03
COL9A3-211ENST00000477612 STK10O94804 968 aaKnown RBP21.48■■□□□ 1.03
COL9A3-211ENST00000477612 ACP5P13686 325 aa21.48■■□□□ 1.03
COL9A3-211ENST00000477612 F3P13726 295 aa21.48■■□□□ 1.03
COL9A3-211ENST00000477612 PSMB4P28070 264 aa21.48■■□□□ 1.03
COL9A3-211ENST00000477612 ALDH4A1P30038 563 aa21.48■■□□□ 1.03
COL9A3-211ENST00000477612 UGT1A5P35504 534 aa21.48■■□□□ 1.03
COL9A3-211ENST00000477612 SPAM1P38567 509 aa21.48■■□□□ 1.03
COL9A3-211ENST00000477612 ZNF648Q5T619 568 aaPredicted RBP21.48■■□□□ 1.03
COL9A3-211ENST00000477612 ZNF574Q6ZN55 896 aaPredicted RBP21.48■■□□□ 1.03
COL9A3-211ENST00000477612 SPACA3Q8IXA5 215 aa21.48■■□□□ 1.03
COL9A3-211ENST00000477612 BRSK1Q8TDC3 778 aa21.48■■□□□ 1.03
COL9A3-211ENST00000477612 BLOC1S5Q8TDH9 187 aa21.48■■□□□ 1.03
COL9A3-211ENST00000477612 C19orf43Q9BQ61 176 aa21.48■■□□□ 1.03
COL9A3-211ENST00000477612 DPH1Q9BZG8 443 aa21.48■■□□□ 1.03
COL9A3-211ENST00000477612 TSGA10Q9BZW7 698 aa21.48■■□□□ 1.03
COL9A3-211ENST00000477612 ARNT2Q9HBZ2 717 aa21.48■■□□□ 1.03
COL9A3-211ENST00000477612 RALYQ9UKM9 306 aaKnown RBP21.48■■□□□ 1.03
COL9A3-211ENST00000477612 KCNK6Q9Y257 313 aa21.48■■□□□ 1.03
COL9A3-211ENST00000477612 PCDHGA7Q9Y5G6 932 aa21.48■■□□□ 1.03
COL9A3-211ENST00000477612 OR5K4A6NMS3 321 aa21.47■■□□□ 1.03
COL9A3-211ENST00000477612 KMOO15229 486 aa21.47■■□□□ 1.03
COL9A3-211ENST00000477612 ARHGAP6O43182 974 aa21.47■■□□□ 1.03
COL9A3-211ENST00000477612 KRT86O43790 486 aa21.47■■□□□ 1.03
COL9A3-211ENST00000477612 TNFSF15O95150 251 aa21.47■■□□□ 1.03
COL9A3-211ENST00000477612 SLC2A4P14672 509 aa21.47■■□□□ 1.03
COL9A3-211ENST00000477612 GPLD1P80108 840 aa21.47■■□□□ 1.03
COL9A3-211ENST00000477612 TLE3Q04726 772 aa21.47■■□□□ 1.03
COL9A3-211ENST00000477612 TMEM115Q12893 351 aaPredicted RBP21.47■■□□□ 1.03
COL9A3-211ENST00000477612 PRPSAP1Q14558 356 aa21.47■■□□□ 1.03
COL9A3-211ENST00000477612 KHDC1Q4VXA5 237 aaKnown RBP21.47■■□□□ 1.03
COL9A3-211ENST00000477612 ZNF547Q8IVP9 402 aa21.47■■□□□ 1.03
COL9A3-211ENST00000477612 SLC35B2Q8TB61 432 aa21.47■■□□□ 1.03
COL9A3-211ENST00000477612 CCDC110Q8TBZ0 833 aa21.47■■□□□ 1.03
COL9A3-211ENST00000477612 DPYSL5Q9BPU6 564 aa21.47■■□□□ 1.03
COL9A3-211ENST00000477612 FICDQ9BVA6 458 aa21.47■■□□□ 1.03
COL9A3-211ENST00000477612 SEMA6CQ9H3T2 930 aa21.47■■□□□ 1.03
COL9A3-211ENST00000477612 PRORYQ9H606 182 aa21.47■■□□□ 1.03
COL9A3-211ENST00000477612 ACSL6Q9UKU0 697 aa21.47■■□□□ 1.03
COL9A3-211ENST00000477612 KIR2DS5A0A0G2JLQ3 304 aa21.46■■□□□ 1.03
COL9A3-211ENST00000477612 A0A0G2JNG1 304 aa21.46■■□□□ 1.03
COL9A3-211ENST00000477612 KIR2DS3K7RE56 304 aa21.46■■□□□ 1.03
COL9A3-211ENST00000477612 GAPDHSO14556 408 aaPredicted RBP21.46■■□□□ 1.03
COL9A3-211ENST00000477612 CDK14O94921 469 aa21.46■■□□□ 1.03
COL9A3-211ENST00000477612 CCDC173Q0VFZ6 552 aa21.46■■□□□ 1.03
COL9A3-211ENST00000477612 BIRC2Q13490 618 aa21.46■■□□□ 1.03
COL9A3-211ENST00000477612 KIR2DS5Q14953 304 aa21.46■■□□□ 1.03
COL9A3-211ENST00000477612 TAF1AQ15573 450 aaPredicted RBP21.46■■□□□ 1.03
COL9A3-211ENST00000477612 MAP9Q49MG5 647 aa21.46■■□□□ 1.03
COL9A3-211ENST00000477612 ZNF662Q6ZS27 426 aa21.46■■□□□ 1.03
COL9A3-211ENST00000477612 LRRTM4Q86VH4 590 aa21.46■■□□□ 1.03
COL9A3-211ENST00000477612 CCDC97Q96F63 343 aaPredicted RBP21.46■■□□□ 1.03
COL9A3-211ENST00000477612 TIMM29Q9BSF4 260 aa21.46■■□□□ 1.03
COL9A3-211ENST00000477612 RDH14Q9HBH5 336 aa21.46■■□□□ 1.03
COL9A3-211ENST00000477612 SMOXQ9NWM0 555 aa21.46■■□□□ 1.03
COL9A3-211ENST00000477612 PDP2Q9P2J9 529 aa21.46■■□□□ 1.03
COL9A3-211ENST00000477612 SLC23A2Q9UGH3 650 aa21.46■■□□□ 1.03
COL9A3-211ENST00000477612 PKP3Q9Y446 797 aa21.46■■□□□ 1.03
COL9A3-211ENST00000477612 TRBV23OR9-2A0A075B6M9 112 aa21.45■■□□□ 1.02
COL9A3-211ENST00000477612 GLYATL1P3A0A0U1RQE8 302 aa21.45■■□□□ 1.02
COL9A3-211ENST00000477612 MTX2O75431 263 aa21.45■■□□□ 1.02
COL9A3-211ENST00000477612 ZNF7P17097 686 aaPredicted RBP21.45■■□□□ 1.02
COL9A3-211ENST00000477612 LPOP22079 712 aaPredicted RBP21.45■■□□□ 1.02
COL9A3-211ENST00000477612 LIMK2P53671 638 aa21.45■■□□□ 1.02
COL9A3-211ENST00000477612 HHEXQ03014 270 aa21.45■■□□□ 1.02
COL9A3-211ENST00000477612 CFHR1Q03591 330 aa21.45■■□□□ 1.02
COL9A3-211ENST00000477612 TRA2AQ13595 282 aaKnown RBP eCLIP21.45■■□□□ 1.02
COL9A3-211ENST00000477612 ITGA9Q13797 1035 aa21.45■■□□□ 1.02
COL9A3-211ENST00000477612 CHRNA6Q15825 494 aa21.45■■□□□ 1.02
COL9A3-211ENST00000477612 PARP6Q2NL67 630 aa21.45■■□□□ 1.02
COL9A3-211ENST00000477612 AMZ1Q400G9 498 aa21.45■■□□□ 1.02
COL9A3-211ENST00000477612 KCTD11Q693B1 232 aa21.45■■□□□ 1.02
COL9A3-211ENST00000477612 DENND5AQ6IQ26 1287 aa21.45■■□□□ 1.02
COL9A3-211ENST00000477612 FOXR1Q6PIV2 292 aa21.45■■□□□ 1.02
COL9A3-211ENST00000477612 USP53Q70EK8 1073 aa21.45■■□□□ 1.02
COL9A3-211ENST00000477612 C11orf96Q7Z7L8 435 aa21.45■■□□□ 1.02
COL9A3-211ENST00000477612 SLC9B2Q86UD5 537 aa21.45■■□□□ 1.02
COL9A3-211ENST00000477612 AVL9Q8NBF6 648 aa21.45■■□□□ 1.02
COL9A3-211ENST00000477612 CCDC112Q8NEF3 446 aa21.45■■□□□ 1.02
COL9A3-211ENST00000477612 DDHD1Q8NEL9 900 aa21.45■■□□□ 1.02
COL9A3-211ENST00000477612 OR4D9Q8NGE8 314 aa21.45■■□□□ 1.02
COL9A3-211ENST00000477612 KCNE4Q8WWG9 221 aa21.45■■□□□ 1.02
COL9A3-211ENST00000477612 SH3KBP1Q96B97 665 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms