RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 WDR92Q96MX6 357 aa15.18■□□□□ 0.02
SEC13-215ENST00000477547 LGR4Q9BXB1 951 aa15.18■□□□□ 0.02
SEC13-215ENST00000477547 UGT1A7Q9HAW7 530 aa15.18■□□□□ 0.02
SEC13-215ENST00000477547 UGT1A10Q9HAW8 530 aa15.18■□□□□ 0.02
SEC13-215ENST00000477547 UGT1A8Q9HAW9 530 aa15.18■□□□□ 0.02
SEC13-215ENST00000477547 PLAC1Q9HBJ0 212 aa15.18■□□□□ 0.02
SEC13-215ENST00000477547 ARFGAP3Q9NP61 516 aa15.18■□□□□ 0.02
SEC13-215ENST00000477547 C20orf96Q9NUD7 363 aaPredicted RBP15.18■□□□□ 0.02
SEC13-215ENST00000477547 FAM169AQ9Y6X4 670 aa15.18■□□□□ 0.02
SEC13-215ENST00000477547 TRBV5-4A0A0C4DH59 114 aa15.17■□□□□ 0.02
SEC13-215ENST00000477547 GOLGA8KD6RF30 607 aa15.17■□□□□ 0.02
SEC13-215ENST00000477547 GOLGA8TH3BQL2 631 aa15.17■□□□□ 0.02
SEC13-215ENST00000477547 TLR4O00206 839 aa15.17■□□□□ 0.02
SEC13-215ENST00000477547 MTX2O75431 263 aa15.17■□□□□ 0.02
SEC13-215ENST00000477547 SLC25A14O95258 325 aaPredicted RBP15.17■□□□□ 0.02
SEC13-215ENST00000477547 CA5AP35218 305 aa15.17■□□□□ 0.02
SEC13-215ENST00000477547 ARCN1P48444 511 aaKnown RBP15.17■□□□□ 0.02
SEC13-215ENST00000477547 CDKN1CP49918 316 aaPredicted RBP15.17■□□□□ 0.02
SEC13-215ENST00000477547 NXPH1P58417 271 aa15.17■□□□□ 0.02
SEC13-215ENST00000477547 THOC5Q13769 683 aaKnown RBP15.17■□□□□ 0.02
SEC13-215ENST00000477547 PTK2BQ14289 1009 aa15.17■□□□□ 0.02
SEC13-215ENST00000477547 LDLRAP1Q5SW96 308 aa15.17■□□□□ 0.02
SEC13-215ENST00000477547 ZNF470Q6ECI4 717 aa15.17■□□□□ 0.02
SEC13-215ENST00000477547 TAS2R42Q7RTR8 314 aa15.17■□□□□ 0.02
SEC13-215ENST00000477547 KCNMB4Q86W47 210 aa15.17■□□□□ 0.02
SEC13-215ENST00000477547 PARGQ86W56 976 aa15.17■□□□□ 0.02
SEC13-215ENST00000477547 PIANPQ8IYJ0 282 aa15.17■□□□□ 0.02
SEC13-215ENST00000477547 UNC5BQ8IZJ1 945 aa15.17■□□□□ 0.02
SEC13-215ENST00000477547 PDXPQ96GD0 296 aa15.17■□□□□ 0.02
SEC13-215ENST00000477547 COX14Q96I36 57 aa15.17■□□□□ 0.02
SEC13-215ENST00000477547 FAM167BQ9BTA0 163 aa15.17■□□□□ 0.02
SEC13-215ENST00000477547 ZCCHC2Q9C0B9 1178 aaKnown RBP15.17■□□□□ 0.02
SEC13-215ENST00000477547 CDC42EP4Q9H3Q1 356 aaKnown RBP15.17■□□□□ 0.02
SEC13-215ENST00000477547 SMOC1Q9H4F8 434 aa15.17■□□□□ 0.02
SEC13-215ENST00000477547 MARCH4Q9P2E8 410 aaPredicted RBP15.17■□□□□ 0.02
SEC13-215ENST00000477547 KLQ9UEF7 1012 aa15.17■□□□□ 0.02
SEC13-215ENST00000477547 TMPRSS11EQ9UL52 423 aa15.17■□□□□ 0.02
SEC13-215ENST00000477547 CNOT6Q9ULM6 557 aaKnown RBP15.17■□□□□ 0.02
SEC13-215ENST00000477547 OAS3Q9Y6K5 1087 aaKnown RBP15.17■□□□□ 0.02
SEC13-215ENST00000477547 AGAP14A8MT82 685 aa15.17■□□□□ 0.02
SEC13-215ENST00000477547 CD3EAPO15446 510 aaKnown RBP15.17■□□□□ 0.02
SEC13-215ENST00000477547 ASMTLO95671 621 aa15.17■□□□□ 0.02
SEC13-215ENST00000477547 HOXC4P09017 264 aaPredicted RBP15.17■□□□□ 0.02
SEC13-215ENST00000477547 MCM3P25205 808 aa15.17■□□□□ 0.02
SEC13-215ENST00000477547 ACRV1P26436 265 aa15.17■□□□□ 0.02
SEC13-215ENST00000477547 SSTR1P30872 391 aa15.17■□□□□ 0.02
SEC13-215ENST00000477547 GRIK2Q13002 908 aa15.17■□□□□ 0.02
SEC13-215ENST00000477547 SEMA3AQ14563 771 aa15.17■□□□□ 0.02
SEC13-215ENST00000477547 DBN1Q16643 649 aa15.17■□□□□ 0.02
SEC13-215ENST00000477547 KHDC1Q4VXA5 237 aaKnown RBP15.17■□□□□ 0.02
SEC13-215ENST00000477547 ZNF648Q5T619 568 aaPredicted RBP15.17■□□□□ 0.02
SEC13-215ENST00000477547 TCEAL6Q6IPX3 200 aa15.17■□□□□ 0.02
SEC13-215ENST00000477547 MRNIPQ6NTE8 343 aa15.17■□□□□ 0.02
SEC13-215ENST00000477547 SERPINA9Q86WD7 417 aa15.17■□□□□ 0.02
SEC13-215ENST00000477547 SPATS2Q86XZ4 545 aaKnown RBP15.17■□□□□ 0.02
SEC13-215ENST00000477547 DCP2Q8IU60 420 aaKnown RBP15.17■□□□□ 0.02
SEC13-215ENST00000477547 PALM2Q8IXS6 379 aa15.17■□□□□ 0.02
SEC13-215ENST00000477547 TCEAL3Q969E4 200 aa15.17■□□□□ 0.02
SEC13-215ENST00000477547 SGSM3Q96HU1 749 aa15.17■□□□□ 0.02
SEC13-215ENST00000477547 VPS37BQ9H9H4 285 aa15.17■□□□□ 0.02
SEC13-215ENST00000477547 CAPN10Q9HC96 672 aa15.17■□□□□ 0.02
SEC13-215ENST00000477547 FGF22Q9HCT0 170 aa15.17■□□□□ 0.02
SEC13-215ENST00000477547 FSCN3Q9NQT6 498 aa15.17■□□□□ 0.02
SEC13-215ENST00000477547 NINJ2Q9NZG7 142 aa15.17■□□□□ 0.02
SEC13-215ENST00000477547 VPS18Q9P253 973 aa15.17■□□□□ 0.02
SEC13-215ENST00000477547 SLC6A14Q9UN76 642 aa15.17■□□□□ 0.02
SEC13-215ENST00000477547 ANKRD6Q9Y2G4 727 aa15.17■□□□□ 0.02
SEC13-215ENST00000477547 SPTY2D1-AS1A0A0U1RR47 76 aa15.16■□□□□ 0.02
SEC13-215ENST00000477547 TMEM202A6NGA9 273 aa15.16■□□□□ 0.02
SEC13-215ENST00000477547 SPAG6O75602 509 aa15.16■□□□□ 0.02
SEC13-215ENST00000477547 FAM153BP0C7A2 387 aa15.16■□□□□ 0.02
SEC13-215ENST00000477547 OGNP20774 298 aaKnown RBP15.16■□□□□ 0.02
SEC13-215ENST00000477547 GTF2H3Q13889 308 aa15.16■□□□□ 0.02
SEC13-215ENST00000477547 FZD2Q14332 565 aa15.16■□□□□ 0.02
SEC13-215ENST00000477547 SLMAPQ14BN4 828 aa15.16■□□□□ 0.02
SEC13-215ENST00000477547 KIF19Q2TAC6 998 aa15.16■□□□□ 0.02
SEC13-215ENST00000477547 FAM153CQ494X1 144 aa15.16■□□□□ 0.02
SEC13-215ENST00000477547 PLA2G2CQ5R387 149 aa15.16■□□□□ 0.02
SEC13-215ENST00000477547 NEPROQ6NW34 567 aa15.16■□□□□ 0.02
SEC13-215ENST00000477547 WDR93Q6P2C0 686 aa15.16■□□□□ 0.02
SEC13-215ENST00000477547 TRMT10BQ6PF06 316 aaKnown RBP15.16■□□□□ 0.02
SEC13-215ENST00000477547 SLC23A3Q6PIS1 610 aa15.16■□□□□ 0.02
SEC13-215ENST00000477547 ENPP7Q6UWV6 458 aa15.16■□□□□ 0.02
SEC13-215ENST00000477547 MARK2Q7KZI7 788 aaKnown RBP15.16■□□□□ 0.02
SEC13-215ENST00000477547 RELL1Q8IUW5 271 aa15.16■□□□□ 0.02
SEC13-215ENST00000477547 OR56A4Q8NGH8 313 aa15.16■□□□□ 0.02
SEC13-215ENST00000477547 CALML6Q8TD86 181 aa15.16■□□□□ 0.02
SEC13-215ENST00000477547 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.16■□□□□ 0.02
SEC13-215ENST00000477547 TTC25Q96NG3 672 aa15.16■□□□□ 0.02
SEC13-215ENST00000477547 COPS8Q99627 209 aa15.16■□□□□ 0.02
SEC13-215ENST00000477547 NUSAP1Q9BXS6 441 aaKnown RBP15.16■□□□□ 0.02
SEC13-215ENST00000477547 OR2AG1Q9H205 316 aa15.16■□□□□ 0.02
SEC13-215ENST00000477547 PPANQ9NQ55 473 aaKnown RBP15.16■□□□□ 0.02
SEC13-215ENST00000477547 ZDHHC3Q9NYG2 299 aa15.16■□□□□ 0.02
SEC13-215ENST00000477547 MOSPD1Q9UJG1 213 aa15.16■□□□□ 0.02
SEC13-215ENST00000477547 TMEM98Q9Y2Y6 226 aa15.16■□□□□ 0.02
SEC13-215ENST00000477547 SNX11Q9Y5W9 270 aa15.16■□□□□ 0.02
SEC13-215ENST00000477547 TCRBV9S1A1TA0A576 114 aa15.15■□□□□ 0.02
SEC13-215ENST00000477547 PRSS38A1L453 326 aa15.15■□□□□ 0.02
SEC13-215ENST00000477547 CFAP99D6REC4 459 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms