RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 ANKRD28O15084 1053 aa4.85□□□□□ -1.63
PTCD3-211ENST00000476215 PLPP2O43688 288 aa4.85□□□□□ -1.63
PTCD3-211ENST00000476215 UGT1A1P22309 533 aa4.85□□□□□ -1.63
PTCD3-211ENST00000476215 ACSL1P33121 698 aa4.85□□□□□ -1.63
PTCD3-211ENST00000476215 CLDN20P56880 219 aa4.85□□□□□ -1.63
PTCD3-211ENST00000476215 MRPS5P82675 430 aaKnown RBP4.85□□□□□ -1.63
PTCD3-211ENST00000476215 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.85□□□□□ -1.63
PTCD3-211ENST00000476215 SATL1Q86VE3 508 aa4.85□□□□□ -1.63
PTCD3-211ENST00000476215 ARID3BQ8IVW6 561 aaPredicted RBP4.85□□□□□ -1.63
PTCD3-211ENST00000476215 SCYL3Q8IZE3 742 aa4.85□□□□□ -1.63
PTCD3-211ENST00000476215 RNF113BQ8IZP6 322 aaKnown RBP4.85□□□□□ -1.63
PTCD3-211ENST00000476215 RASGEF1CQ8N431 466 aa4.85□□□□□ -1.63
PTCD3-211ENST00000476215 LMO3Q8TAP4 145 aa4.85□□□□□ -1.63
PTCD3-211ENST00000476215 GSDMBQ8TAX9 411 aa4.85□□□□□ -1.63
PTCD3-211ENST00000476215 ABTB1Q969K4 478 aaPredicted RBP4.85□□□□□ -1.63
PTCD3-211ENST00000476215 JAKMIP2Q96AA8 810 aa4.85□□□□□ -1.63
PTCD3-211ENST00000476215 CCDC34Q96HJ3 373 aa4.85□□□□□ -1.63
PTCD3-211ENST00000476215 IGSF21Q96ID5 467 aa4.85□□□□□ -1.63
PTCD3-211ENST00000476215 C1QTNF4Q9BXJ3 329 aa4.85□□□□□ -1.63
PTCD3-211ENST00000476215 HRH4Q9H3N8 390 aa4.85□□□□□ -1.63
PTCD3-211ENST00000476215 PAG1Q9NWQ8 432 aa4.85□□□□□ -1.63
PTCD3-211ENST00000476215 SWAP70Q9UH65 585 aa4.85□□□□□ -1.63
PTCD3-211ENST00000476215 DBNLQ9UJU6 430 aaKnown RBP4.85□□□□□ -1.63
PTCD3-211ENST00000476215 PTPRCP08575 1304 aa4.85□□□□□ -1.63
PTCD3-211ENST00000476215 ZNF587BE7ETH6 402 aa4.84□□□□□ -1.63
PTCD3-211ENST00000476215 ACOT8O14734 319 aa4.84□□□□□ -1.63
PTCD3-211ENST00000476215 MITFO75030 526 aaPredicted RBP4.84□□□□□ -1.63
PTCD3-211ENST00000476215 TUBBP07437 444 aa4.84□□□□□ -1.63
PTCD3-211ENST00000476215 FGF3P11487 239 aaPredicted RBP4.84□□□□□ -1.63
PTCD3-211ENST00000476215 MYOD1P15172 320 aa4.84□□□□□ -1.63
PTCD3-211ENST00000476215 RELQ04864 619 aaPredicted RBP4.84□□□□□ -1.63
PTCD3-211ENST00000476215 KCNC3Q14003 757 aa4.84□□□□□ -1.63
PTCD3-211ENST00000476215 CCDC96Q2M329 555 aa4.84□□□□□ -1.63
PTCD3-211ENST00000476215 LCN10Q6JVE6 187 aa4.84□□□□□ -1.63
PTCD3-211ENST00000476215 BRINP3Q76B58 766 aa4.84□□□□□ -1.63
PTCD3-211ENST00000476215 EPHX4Q8IUS5 362 aa4.84□□□□□ -1.63
PTCD3-211ENST00000476215 MAP7D3Q8IWC1 876 aa4.84□□□□□ -1.63
PTCD3-211ENST00000476215 C1orf87Q8N0U7 546 aa4.84□□□□□ -1.63
PTCD3-211ENST00000476215 EMC1Q8N766 993 aa4.84□□□□□ -1.63
PTCD3-211ENST00000476215 RBMXL3Q8N7X1 1067 aaKnown RBP4.84□□□□□ -1.63
PTCD3-211ENST00000476215 ZNF441Q8N8Z8 693 aa4.84□□□□□ -1.63
PTCD3-211ENST00000476215 POC5Q8NA72 575 aa4.84□□□□□ -1.63
PTCD3-211ENST00000476215 KCNH5Q8NCM2 988 aa4.84□□□□□ -1.63
PTCD3-211ENST00000476215 THAP6Q8TBB0 222 aa4.84□□□□□ -1.63
PTCD3-211ENST00000476215 UTP15Q8TED0 518 aaKnown RBP4.84□□□□□ -1.63
PTCD3-211ENST00000476215 SLC38A5Q8WUX1 472 aa4.84□□□□□ -1.63
PTCD3-211ENST00000476215 SLC44A1Q8WWI5 657 aa4.84□□□□□ -1.63
PTCD3-211ENST00000476215 PIGTQ969N2 578 aa4.84□□□□□ -1.63
PTCD3-211ENST00000476215 DUX5Q96PT3 197 aa4.84□□□□□ -1.63
PTCD3-211ENST00000476215 MXD3Q9BW11 206 aa4.84□□□□□ -1.63
PTCD3-211ENST00000476215 DNAJC18Q9H819 358 aa4.84□□□□□ -1.63
PTCD3-211ENST00000476215 UBTD1Q9HAC8 227 aa4.84□□□□□ -1.63
PTCD3-211ENST00000476215 WWOXQ9NZC7 414 aa4.84□□□□□ -1.63
PTCD3-211ENST00000476215 SEC63Q9UGP8 760 aaKnown RBP4.84□□□□□ -1.63
PTCD3-211ENST00000476215 LILRA5A6NI73 299 aa4.83□□□□□ -1.64
PTCD3-211ENST00000476215 LRRC72A6NJI9 287 aa4.83□□□□□ -1.64
PTCD3-211ENST00000476215 TMCC2O75069 709 aa4.83□□□□□ -1.64
PTCD3-211ENST00000476215 TGFB3P10600 412 aa4.83□□□□□ -1.64
PTCD3-211ENST00000476215 USP8P40818 1118 aa4.83□□□□□ -1.64
PTCD3-211ENST00000476215 EIF2DP41214 584 aaKnown RBP4.83□□□□□ -1.64
PTCD3-211ENST00000476215 NRIP1P48552 1158 aa4.83□□□□□ -1.64
PTCD3-211ENST00000476215 ISL1P61371 349 aa4.83□□□□□ -1.64
PTCD3-211ENST00000476215 COG7P83436 770 aa4.83□□□□□ -1.64
PTCD3-211ENST00000476215 EEF1A2Q05639 463 aaKnown RBP4.83□□□□□ -1.64
PTCD3-211ENST00000476215 ZBTB17Q13105 803 aa4.83□□□□□ -1.64
PTCD3-211ENST00000476215 DLG2Q15700 870 aa4.83□□□□□ -1.64
PTCD3-211ENST00000476215 KRTCAP3Q53RY4 240 aa4.83□□□□□ -1.64
PTCD3-211ENST00000476215 CAPRIN2Q6IMN6 1127 aaKnown RBP4.83□□□□□ -1.64
PTCD3-211ENST00000476215 TRNP1Q6NT89 227 aa4.83□□□□□ -1.64
PTCD3-211ENST00000476215 GFRALQ6UXV0 394 aa4.83□□□□□ -1.64
PTCD3-211ENST00000476215 UNQ6126/PRO20091Q6UXV3 157 aa4.83□□□□□ -1.64
PTCD3-211ENST00000476215 TMEM219Q86XT9 240 aa4.83□□□□□ -1.64
PTCD3-211ENST00000476215 CDCA5Q96FF9 252 aa4.83□□□□□ -1.64
PTCD3-211ENST00000476215 FEM1CQ96JP0 617 aa4.83□□□□□ -1.64
PTCD3-211ENST00000476215 IL17FQ96PD4 163 aa4.83□□□□□ -1.64
PTCD3-211ENST00000476215 CTAGE1Q96RT6 745 aa4.83□□□□□ -1.64
PTCD3-211ENST00000476215 CSTL1Q9H114 145 aa4.83□□□□□ -1.64
PTCD3-211ENST00000476215 DDX31Q9H8H2 851 aaKnown RBP4.83□□□□□ -1.64
PTCD3-211ENST00000476215 LRRC4Q9HBW1 653 aa4.83□□□□□ -1.64
PTCD3-211ENST00000476215 TMEM30AQ9NV96 361 aa4.83□□□□□ -1.64
PTCD3-211ENST00000476215 EXO1Q9UQ84 846 aaKnown RBP4.83□□□□□ -1.64
PTCD3-211ENST00000476215 B3GALT5Q9Y2C3 310 aa4.83□□□□□ -1.64
PTCD3-211ENST00000476215 BICRAQ9NZM4 1560 aa4.82□□□□□ -1.64
PTCD3-211ENST00000476215 DCAF1Q9Y4B6 1507 aa4.82□□□□□ -1.64
PTCD3-211ENST00000476215 ZCCHC6Q5VYS8 1495 aaKnown RBP4.82□□□□□ -1.64
PTCD3-211ENST00000476215 IGHV4OR15-8A0A075B7B6 117 aa4.82□□□□□ -1.64
PTCD3-211ENST00000476215 A0A1W2PR77 199 aa4.82□□□□□ -1.64
PTCD3-211ENST00000476215 DENND3A2RUS2 1198 aa4.82□□□□□ -1.64
PTCD3-211ENST00000476215 A8MV72 311 aaPredicted RBP4.82□□□□□ -1.64
PTCD3-211ENST00000476215 BEST1O76090 585 aa4.82□□□□□ -1.64
PTCD3-211ENST00000476215 CAMTA2O94983 1202 aa4.82□□□□□ -1.64
PTCD3-211ENST00000476215 STARD3NLO95772 234 aa4.82□□□□□ -1.64
PTCD3-211ENST00000476215 MMP9P14780 707 aa4.82□□□□□ -1.64
PTCD3-211ENST00000476215 ITGA2P17301 1181 aa4.82□□□□□ -1.64
PTCD3-211ENST00000476215 POLR2CP19387 275 aaPredicted RBP4.82□□□□□ -1.64
PTCD3-211ENST00000476215 SAT1P21673 171 aa4.82□□□□□ -1.64
PTCD3-211ENST00000476215 AMPHP49418 695 aa4.82□□□□□ -1.64
PTCD3-211ENST00000476215 MMP14P50281 582 aa4.82□□□□□ -1.64
PTCD3-211ENST00000476215 SUOXP51687 545 aa4.82□□□□□ -1.64
PTCD3-211ENST00000476215 PSMC6P62333 389 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms