RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 TMEM135Q86UB9 458 aa16.74■□□□□ 0.27
SCAF11-206ENST00000474828 NXPE1Q8N323 547 aa16.74■□□□□ 0.27
SCAF11-206ENST00000474828 EID2Q8N6I1 236 aa16.74■□□□□ 0.27
SCAF11-206ENST00000474828 DEFB124Q8NES8 71 aa16.74■□□□□ 0.27
SCAF11-206ENST00000474828 PPHLN1Q8NEY8 458 aaKnown RBP16.74■□□□□ 0.27
SCAF11-206ENST00000474828 KIF18AQ8NI77 898 aa16.74■□□□□ 0.27
SCAF11-206ENST00000474828 LMX1AQ8TE12 382 aa16.74■□□□□ 0.27
SCAF11-206ENST00000474828 HEXDCQ8WVB3 486 aa16.74■□□□□ 0.27
SCAF11-206ENST00000474828 OR2M4Q96R27 311 aa16.74■□□□□ 0.27
SCAF11-206ENST00000474828 ERP44Q9BS26 406 aa16.74■□□□□ 0.27
SCAF11-206ENST00000474828 ASB8Q9H765 288 aa16.74■□□□□ 0.27
SCAF11-206ENST00000474828 CHRAC1Q9NRG0 131 aa16.74■□□□□ 0.27
SCAF11-206ENST00000474828 SLC2A6Q9UGQ3 507 aa16.74■□□□□ 0.27
SCAF11-206ENST00000474828 ASIC3Q9UHC3 531 aa16.74■□□□□ 0.27
SCAF11-206ENST00000474828 PLXNB3Q9ULL4 1909 aa16.74■□□□□ 0.27
SCAF11-206ENST00000474828 FAM237BA0A1B0GVD1 139 aa16.73■□□□□ 0.27
SCAF11-206ENST00000474828 DCDC2BA2VCK2 349 aa16.73■□□□□ 0.27
SCAF11-206ENST00000474828 CCDC162PA2VCL2 907 aa16.73■□□□□ 0.27
SCAF11-206ENST00000474828 SDR42E2A6NKP2 422 aa16.73■□□□□ 0.27
SCAF11-206ENST00000474828 RAD51CO43502 376 aa16.73■□□□□ 0.27
SCAF11-206ENST00000474828 SIGLEC6O43699 453 aa16.73■□□□□ 0.27
SCAF11-206ENST00000474828 SGTAO43765 313 aa16.73■□□□□ 0.27
SCAF11-206ENST00000474828 AVILO75366 819 aa16.73■□□□□ 0.27
SCAF11-206ENST00000474828 URI1O94763 535 aaPredicted RBP16.73■□□□□ 0.27
SCAF11-206ENST00000474828 ALPPL2P10696 532 aa16.73■□□□□ 0.27
SCAF11-206ENST00000474828 CTSEP14091 401 aa16.73■□□□□ 0.27
SCAF11-206ENST00000474828 ITGALP20701 1170 aa16.73■□□□□ 0.27
SCAF11-206ENST00000474828 ACP1P24666 158 aa16.73■□□□□ 0.27
SCAF11-206ENST00000474828 MGAT1P26572 445 aa16.73■□□□□ 0.27
SCAF11-206ENST00000474828 DRG2P55039 364 aaKnown RBP16.73■□□□□ 0.27
SCAF11-206ENST00000474828 B4GALNT1Q00973 533 aa16.73■□□□□ 0.27
SCAF11-206ENST00000474828 CACNG1Q06432 222 aa16.73■□□□□ 0.27
SCAF11-206ENST00000474828 C1orf61Q13536 156 aa16.73■□□□□ 0.27
SCAF11-206ENST00000474828 SEPT6Q14141 434 aa16.73■□□□□ 0.27
SCAF11-206ENST00000474828 TRIP6Q15654 476 aaKnown RBP16.73■□□□□ 0.27
SCAF11-206ENST00000474828 DUPD1Q68J44 220 aa16.73■□□□□ 0.27
SCAF11-206ENST00000474828 GKN2Q86XP6 184 aa16.73■□□□□ 0.27
SCAF11-206ENST00000474828 GALNT13Q8IUC8 556 aa16.73■□□□□ 0.27
SCAF11-206ENST00000474828 PIANPQ8IYJ0 282 aa16.73■□□□□ 0.27
SCAF11-206ENST00000474828 GPR156Q8NFN8 814 aa16.73■□□□□ 0.27
SCAF11-206ENST00000474828 SETD7Q8WTS6 366 aaKnown RBP16.73■□□□□ 0.27
SCAF11-206ENST00000474828 SEC14L1Q92503 715 aa16.73■□□□□ 0.27
SCAF11-206ENST00000474828 ZNF514Q96K75 400 aaPredicted RBP16.73■□□□□ 0.27
SCAF11-206ENST00000474828 LINC00615Q96LM1 132 aaPredicted RBP16.73■□□□□ 0.27
SCAF11-206ENST00000474828 TRIM51Q9BSJ1 452 aa16.73■□□□□ 0.27
SCAF11-206ENST00000474828 OR2AG1Q9H205 316 aa16.73■□□□□ 0.27
SCAF11-206ENST00000474828 SUDS3Q9H7L9 328 aaPredicted RBP16.73■□□□□ 0.27
SCAF11-206ENST00000474828 SYBUQ9NX95 663 aa16.73■□□□□ 0.27
SCAF11-206ENST00000474828 NCKIPSDQ9NZQ3 722 aa16.73■□□□□ 0.27
SCAF11-206ENST00000474828 PCDHGA1Q9Y5H4 931 aa16.73■□□□□ 0.27
SCAF11-206ENST00000474828 DNMT3AQ9Y6K1 912 aaPredicted RBP16.73■□□□□ 0.27
SCAF11-206ENST00000474828 A6NCN8 305 aa16.72■□□□□ 0.27
SCAF11-206ENST00000474828 CCL22O00626 93 aa16.72■□□□□ 0.27
SCAF11-206ENST00000474828 NDC80O14777 642 aa16.72■□□□□ 0.27
SCAF11-206ENST00000474828 GRID2O43424 1007 aa16.72■□□□□ 0.27
SCAF11-206ENST00000474828 KCNJ13O60928 360 aa16.72■□□□□ 0.27
SCAF11-206ENST00000474828 CDK14O94921 469 aa16.72■□□□□ 0.27
SCAF11-206ENST00000474828 CKMT1AP12532 417 aa16.72■□□□□ 0.27
SCAF11-206ENST00000474828 ACRV1P26436 265 aa16.72■□□□□ 0.27
SCAF11-206ENST00000474828 ARNTP27540 789 aa16.72■□□□□ 0.27
SCAF11-206ENST00000474828 RPL21P46778 160 aaKnown RBP16.72■□□□□ 0.27
SCAF11-206ENST00000474828 GNPDA1P46926 289 aa16.72■□□□□ 0.27
SCAF11-206ENST00000474828 ARCN1P48444 511 aaKnown RBP16.72■□□□□ 0.27
SCAF11-206ENST00000474828 CRADDP78560 199 aa16.72■□□□□ 0.27
SCAF11-206ENST00000474828 CTBSQ01459 385 aa16.72■□□□□ 0.27
SCAF11-206ENST00000474828 C2orf54Q08AI8 447 aa16.72■□□□□ 0.27
SCAF11-206ENST00000474828 DMPKQ09013 629 aa16.72■□□□□ 0.27
SCAF11-206ENST00000474828 BCL7AQ4VC05 210 aa16.72■□□□□ 0.27
SCAF11-206ENST00000474828 IZUMO3Q5VZ72 239 aa16.72■□□□□ 0.27
SCAF11-206ENST00000474828 PACS1Q6VY07 963 aa16.72■□□□□ 0.27
SCAF11-206ENST00000474828 RD3Q7Z3Z2 195 aa16.72■□□□□ 0.27
SCAF11-206ENST00000474828 RASGEF1AQ8N9B8 481 aa16.72■□□□□ 0.27
SCAF11-206ENST00000474828 CCL4L1Q8NHW4 92 aa16.72■□□□□ 0.27
SCAF11-206ENST00000474828 HDAC10Q969S8 669 aa16.72■□□□□ 0.27
SCAF11-206ENST00000474828 SNF8Q96H20 258 aa16.72■□□□□ 0.27
SCAF11-206ENST00000474828 APOLD1Q96LR9 279 aa16.72■□□□□ 0.27
SCAF11-206ENST00000474828 TIMM29Q9BSF4 260 aa16.72■□□□□ 0.27
SCAF11-206ENST00000474828 GSDMCQ9BYG8 508 aa16.72■□□□□ 0.27
SCAF11-206ENST00000474828 ZCCHC2Q9C0B9 1178 aaKnown RBP16.72■□□□□ 0.27
SCAF11-206ENST00000474828 ZDHHC3Q9NYG2 299 aa16.72■□□□□ 0.27
SCAF11-206ENST00000474828 SLC30A1Q9Y6M5 507 aa16.72■□□□□ 0.27
SCAF11-206ENST00000474828 SPEGQ15772 3267 aa16.72■□□□□ 0.27
SCAF11-206ENST00000474828 KLHL33A6NCF5 533 aa16.71■□□□□ 0.27
SCAF11-206ENST00000474828 GIPC1O14908 333 aa16.71■□□□□ 0.27
SCAF11-206ENST00000474828 KMOO15229 486 aa16.71■□□□□ 0.27
SCAF11-206ENST00000474828 ASMTLO95671 621 aa16.71■□□□□ 0.27
SCAF11-206ENST00000474828 LDOC1O95751 146 aaPredicted RBP16.71■□□□□ 0.27
SCAF11-206ENST00000474828 ANXA6P08133 673 aa16.71■□□□□ 0.27
SCAF11-206ENST00000474828 CKMT2P17540 419 aa16.71■□□□□ 0.27
SCAF11-206ENST00000474828 ACADVLP49748 655 aa16.71■□□□□ 0.27
SCAF11-206ENST00000474828 CDKN1CP49918 316 aaPredicted RBP16.71■□□□□ 0.27
SCAF11-206ENST00000474828 NOVA1P51513 510 aaKnown RBP16.71■□□□□ 0.27
SCAF11-206ENST00000474828 TMPRSS15P98073 1019 aa16.71■□□□□ 0.27
SCAF11-206ENST00000474828 ILF3Q12906 894 aaKnown RBP eCLIP16.71■□□□□ 0.27
SCAF11-206ENST00000474828 ILKQ13418 452 aa16.71■□□□□ 0.27
SCAF11-206ENST00000474828 ITIH4Q14624 930 aa16.71■□□□□ 0.27
SCAF11-206ENST00000474828 ZNF658BQ4V348 819 aaPredicted RBP16.71■□□□□ 0.27
SCAF11-206ENST00000474828 ZNF648Q5T619 568 aaPredicted RBP16.71■□□□□ 0.27
SCAF11-206ENST00000474828 KIAA0930Q6ICG6 404 aaPredicted RBP16.71■□□□□ 0.27
SCAF11-206ENST00000474828 PSAPL1Q6NUJ1 521 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms