RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 S100BP04271 92 aaPredicted RBP21.55■■□□□ 1.04
CCM2-206ENST00000474617 EPCAMP16422 314 aa21.55■■□□□ 1.04
CCM2-206ENST00000474617 PKNOX1P55347 436 aa21.55■■□□□ 1.04
CCM2-206ENST00000474617 SLC5A9Q2M3M2 681 aa21.55■■□□□ 1.04
CCM2-206ENST00000474617 CDKL4Q5MAI5 379 aa21.55■■□□□ 1.04
CCM2-206ENST00000474617 KANK2Q63ZY3 851 aa21.55■■□□□ 1.04
CCM2-206ENST00000474617 ICE2Q659A1 982 aa21.55■■□□□ 1.04
CCM2-206ENST00000474617 PGM2L1Q6PCE3 622 aa21.55■■□□□ 1.04
CCM2-206ENST00000474617 AAGABQ6PD74 315 aa21.55■■□□□ 1.04
CCM2-206ENST00000474617 CRTC1Q6UUV9 634 aa21.55■■□□□ 1.04
CCM2-206ENST00000474617 FAM151BQ6UXP7 276 aa21.55■■□□□ 1.04
CCM2-206ENST00000474617 GDPD4Q6W3E5 623 aa21.55■■□□□ 1.04
CCM2-206ENST00000474617 SIDT2Q8NBJ9 832 aaKnown RBP21.55■■□□□ 1.04
CCM2-206ENST00000474617 C19orf60Q96EN9 201 aa21.55■■□□□ 1.04
CCM2-206ENST00000474617 TMEM45AQ9NWC5 275 aa21.55■■□□□ 1.04
CCM2-206ENST00000474617 NFKBIL1Q9UBC1 381 aaPredicted RBP21.55■■□□□ 1.04
CCM2-206ENST00000474617 MRPS23Q9Y3D9 190 aaKnown RBP21.55■■□□□ 1.04
CCM2-206ENST00000474617 SCN8AQ9UQD0 1980 aa21.55■■□□□ 1.04
CCM2-206ENST00000474617 A0A088AWK7 358 aa21.55■■□□□ 1.04
CCM2-206ENST00000474617 TSPAN11A1L157 253 aa21.55■■□□□ 1.04
CCM2-206ENST00000474617 HOXC11O43248 304 aaPredicted RBP21.55■■□□□ 1.04
CCM2-206ENST00000474617 CDK14O94921 469 aa21.55■■□□□ 1.04
CCM2-206ENST00000474617 PRAMEF12O95522 483 aa21.55■■□□□ 1.04
CCM2-206ENST00000474617 ADH1CP00326 375 aa21.55■■□□□ 1.04
CCM2-206ENST00000474617 CLCQ05315 142 aa21.55■■□□□ 1.04
CCM2-206ENST00000474617 CUL3Q13618 768 aa21.55■■□□□ 1.04
CCM2-206ENST00000474617 KPNB1Q14974 876 aaKnown RBP21.55■■□□□ 1.04
CCM2-206ENST00000474617 ACCSLQ4AC99 568 aa21.55■■□□□ 1.04
CCM2-206ENST00000474617 LY6G5CQ5SRR4 150 aa21.55■■□□□ 1.04
CCM2-206ENST00000474617 ADIPOR2Q86V24 386 aa21.55■■□□□ 1.04
CCM2-206ENST00000474617 MYO1HQ8N1T3 1032 aa21.55■■□□□ 1.04
CCM2-206ENST00000474617 PNPLA1Q8N8W4 532 aa21.55■■□□□ 1.04
CCM2-206ENST00000474617 OR56A4Q8NGH8 313 aa21.55■■□□□ 1.04
CCM2-206ENST00000474617 ZNF483Q8TF39 744 aaPredicted RBP21.55■■□□□ 1.04
CCM2-206ENST00000474617 RPL10LQ96L21 214 aaKnown RBP21.55■■□□□ 1.04
CCM2-206ENST00000474617 SMIM14Q96QK8 99 aa21.55■■□□□ 1.04
CCM2-206ENST00000474617 HEPHQ9BQS7 1158 aa21.55■■□□□ 1.04
CCM2-206ENST00000474617 SHCBP1LQ9BZQ2 653 aa21.55■■□□□ 1.04
CCM2-206ENST00000474617 LMAN2LQ9H0V9 348 aa21.55■■□□□ 1.04
CCM2-206ENST00000474617 ZDHHC3Q9NYG2 299 aa21.55■■□□□ 1.04
CCM2-206ENST00000474617 PKD2L2Q9NZM6 624 aa21.55■■□□□ 1.04
CCM2-206ENST00000474617 STX18Q9P2W9 335 aaKnown RBP21.55■■□□□ 1.04
CCM2-206ENST00000474617 SLC7A8Q9UHI5 535 aa21.55■■□□□ 1.04
CCM2-206ENST00000474617 ERVW-1Q9UQF0 538 aa21.55■■□□□ 1.04
CCM2-206ENST00000474617 COPG1Q9Y678 874 aaKnown RBP21.55■■□□□ 1.04
CCM2-206ENST00000474617 ENTPD5O75356 428 aa21.54■■□□□ 1.04
CCM2-206ENST00000474617 ENO3P13929 434 aaPredicted RBP21.54■■□□□ 1.04
CCM2-206ENST00000474617 EEF1DP29692 281 aaKnown RBP21.54■■□□□ 1.04
CCM2-206ENST00000474617 CTSOP43234 321 aaPredicted RBP21.54■■□□□ 1.04
CCM2-206ENST00000474617 STK19P49842 368 aaPredicted RBP21.54■■□□□ 1.04
CCM2-206ENST00000474617 DCDC1P59894 354 aa21.54■■□□□ 1.04
CCM2-206ENST00000474617 STX1BP61266 288 aa21.54■■□□□ 1.04
CCM2-206ENST00000474617 CAMK1Q14012 370 aa21.54■■□□□ 1.04
CCM2-206ENST00000474617 DPY19L3Q6ZPD9 716 aa21.54■■□□□ 1.04
CCM2-206ENST00000474617 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP21.54■■□□□ 1.04
CCM2-206ENST00000474617 C7orf61Q8IZ16 206 aa21.54■■□□□ 1.04
CCM2-206ENST00000474617 POU5F2Q8N7G0 328 aa21.54■■□□□ 1.04
CCM2-206ENST00000474617 EEF1AKMT1Q8WVE0 214 aa21.54■■□□□ 1.04
CCM2-206ENST00000474617 MID1IP1Q9NPA3 183 aa21.54■■□□□ 1.04
CCM2-206ENST00000474617 SPATS2LQ9NUQ6 558 aaKnown RBP21.54■■□□□ 1.04
CCM2-206ENST00000474617 SMOXQ9NWM0 555 aa21.54■■□□□ 1.04
CCM2-206ENST00000474617 DKK3Q9UBP4 350 aa21.54■■□□□ 1.04
CCM2-206ENST00000474617 ANGPTL2Q9UKU9 493 aa21.54■■□□□ 1.04
CCM2-206ENST00000474617 BPTFQ12830 3046 aa21.53■■□□□ 1.04
CCM2-206ENST00000474617 ALPK3Q96L96 1907 aa21.53■■□□□ 1.04
CCM2-206ENST00000474617 NPEPPSL1A6NEC2 478 aa21.53■■□□□ 1.04
CCM2-206ENST00000474617 NPIPB15A6NHN6 443 aaPredicted RBP21.53■■□□□ 1.04
CCM2-206ENST00000474617 TMEM233B4DJY2 109 aa21.53■■□□□ 1.04
CCM2-206ENST00000474617 UBFD1O14562 309 aaKnown RBP21.53■■□□□ 1.04
CCM2-206ENST00000474617 RAD51BO15315 384 aa21.53■■□□□ 1.04
CCM2-206ENST00000474617 PSMG1O95456 288 aa21.53■■□□□ 1.04
CCM2-206ENST00000474617 GM2AP17900 193 aa21.53■■□□□ 1.04
CCM2-206ENST00000474617 ITGAXP20702 1163 aa21.53■■□□□ 1.04
CCM2-206ENST00000474617 MRPL19P49406 292 aaKnown RBP21.53■■□□□ 1.04
CCM2-206ENST00000474617 GRIK2Q13002 908 aa21.53■■□□□ 1.04
CCM2-206ENST00000474617 PCBP2Q15366 365 aaKnown RBP eCLIP21.53■■□□□ 1.04
CCM2-206ENST00000474617 UGT3A2Q3SY77 523 aa21.53■■□□□ 1.04
CCM2-206ENST00000474617 ACSBG2Q5FVE4 666 aa21.53■■□□□ 1.04
CCM2-206ENST00000474617 C1orf146Q5VVC0 180 aa21.53■■□□□ 1.04
CCM2-206ENST00000474617 FRA10AC1Q70Z53 315 aa21.53■■□□□ 1.04
CCM2-206ENST00000474617 LARP4Q71RC2 724 aaKnown RBP eCLIP21.53■■□□□ 1.049e-6■■■■■ 29.6
CCM2-206ENST00000474617 GRASPQ7Z6J2 395 aaPredicted RBP21.53■■□□□ 1.04
CCM2-206ENST00000474617 SNX32Q86XE0 403 aa21.53■■□□□ 1.04
CCM2-206ENST00000474617 CPNE9Q8IYJ1 553 aa21.53■■□□□ 1.04
CCM2-206ENST00000474617 GIMAP7Q8NHV1 300 aa21.53■■□□□ 1.04
CCM2-206ENST00000474617 EXT2Q93063 718 aa21.53■■□□□ 1.04
CCM2-206ENST00000474617 ZNF707Q96C28 371 aaPredicted RBP21.53■■□□□ 1.04
CCM2-206ENST00000474617 MOCOSQ96EN8 888 aa21.53■■□□□ 1.04
CCM2-206ENST00000474617 CATSPER2Q96P56 530 aa21.53■■□□□ 1.04
CCM2-206ENST00000474617 CIPCQ9C0C6 399 aa21.53■■□□□ 1.04
CCM2-206ENST00000474617 ZDHHC6Q9H6R6 413 aa21.53■■□□□ 1.04
CCM2-206ENST00000474617 CDH22Q9UJ99 828 aa21.53■■□□□ 1.04
CCM2-206ENST00000474617 SLC27A6Q9Y2P4 619 aa21.53■■□□□ 1.04
CCM2-206ENST00000474617 SEC23IPQ9Y6Y8 1000 aaKnown RBP21.53■■□□□ 1.04
CCM2-206ENST00000474617 NUP210Q8TEM1 1887 aaPredicted RBP21.52■■□□□ 1.04
CCM2-206ENST00000474617 LOC100653049A0A140TA62 436 aa21.52■■□□□ 1.04
CCM2-206ENST00000474617 CDC7O00311 574 aa21.52■■□□□ 1.04
CCM2-206ENST00000474617 SKAP2O75563 359 aaPredicted RBP21.52■■□□□ 1.04
CCM2-206ENST00000474617 KRT34O76011 436 aa21.52■■□□□ 1.04
CCM2-206ENST00000474617 ANP32DO95626 131 aa21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 4200.3 ms