RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 FCHO1O14526 889 aa3.46□□□□□ -1.85
UBR3-208ENST00000474426 TGFB1I1O43294 461 aa3.46□□□□□ -1.85
UBR3-208ENST00000474426 GALR2O43603 387 aaPredicted RBP3.46□□□□□ -1.85
UBR3-208ENST00000474426 HBP1O60381 514 aa3.46□□□□□ -1.85
UBR3-208ENST00000474426 CIB2O75838 187 aa3.46□□□□□ -1.85
UBR3-208ENST00000474426 METTL18O95568 372 aa3.46□□□□□ -1.85
UBR3-208ENST00000474426 SYF2O95926 243 aaKnown RBP3.46□□□□□ -1.85
UBR3-208ENST00000474426 PGK2P07205 417 aa3.46□□□□□ -1.85
UBR3-208ENST00000474426 ERCC2P18074 760 aa3.46□□□□□ -1.85
UBR3-208ENST00000474426 SRMP19623 302 aa3.46□□□□□ -1.85
UBR3-208ENST00000474426 PTNP21246 168 aa3.46□□□□□ -1.85
UBR3-208ENST00000474426 ACO1P21399 889 aaKnown RBP3.46□□□□□ -1.85
UBR3-208ENST00000474426 MPIP34949 423 aa3.46□□□□□ -1.85
UBR3-208ENST00000474426 RORAP35398 523 aa3.46□□□□□ -1.85
UBR3-208ENST00000474426 IGFALSP35858 605 aa3.46□□□□□ -1.85
UBR3-208ENST00000474426 RPS5P46782 204 aaKnown RBP3.46□□□□□ -1.85
UBR3-208ENST00000474426 CAPZBP47756 277 aa3.46□□□□□ -1.85
UBR3-208ENST00000474426 ALDH3B2P48448 385 aa3.46□□□□□ -1.85
UBR3-208ENST00000474426 ENTPD1P49961 510 aa3.46□□□□□ -1.85
UBR3-208ENST00000474426 NPY4RP50391 375 aa3.46□□□□□ -1.85
UBR3-208ENST00000474426 PRPS1P60891 318 aa3.46□□□□□ -1.85
UBR3-208ENST00000474426 ATP6V0D1P61421 351 aa3.46□□□□□ -1.85
UBR3-208ENST00000474426 HERVK_113P62684 666 aa3.46□□□□□ -1.85
UBR3-208ENST00000474426 RBX1P62877 108 aa3.46□□□□□ -1.85
UBR3-208ENST00000474426 OCA2Q04671 838 aa3.46□□□□□ -1.85
UBR3-208ENST00000474426 PRKCQQ04759 706 aa3.46□□□□□ -1.85
UBR3-208ENST00000474426 IRF3Q14653 427 aa3.46□□□□□ -1.85
UBR3-208ENST00000474426 PON3Q15166 354 aa3.46□□□□□ -1.85
UBR3-208ENST00000474426 HNRNPA1L2Q32P51 320 aaKnown RBP3.46□□□□□ -1.85
UBR3-208ENST00000474426 KLHL26Q53HC5 615 aa3.46□□□□□ -1.85
UBR3-208ENST00000474426 DCAF6Q58WW2 860 aa3.46□□□□□ -1.85
UBR3-208ENST00000474426 CELF3Q5SZQ8 465 aaKnown RBP3.46□□□□□ -1.85
UBR3-208ENST00000474426 SULT1C3Q6IMI6 304 aa3.46□□□□□ -1.85
UBR3-208ENST00000474426 SLC25A25Q6KCM7 469 aa3.46□□□□□ -1.85
UBR3-208ENST00000474426 NIPAL1Q6NVV3 410 aa3.46□□□□□ -1.85
UBR3-208ENST00000474426 TTC27Q6P3X3 843 aa3.46□□□□□ -1.85
UBR3-208ENST00000474426 FAM111BQ6SJ93 734 aa3.46□□□□□ -1.85
UBR3-208ENST00000474426 WASH2PQ6VEQ5 465 aa3.46□□□□□ -1.85
UBR3-208ENST00000474426 SLC39A5Q6ZMH5 540 aa3.46□□□□□ -1.85
UBR3-208ENST00000474426 PPP1R3BQ86XI6 285 aa3.46□□□□□ -1.85
UBR3-208ENST00000474426 KIAA2013Q8IYS2 634 aa3.46□□□□□ -1.85
UBR3-208ENST00000474426 AOPEPQ8N6M6 819 aa3.46□□□□□ -1.85
UBR3-208ENST00000474426 OR5T1Q8NG75 326 aa3.46□□□□□ -1.85
UBR3-208ENST00000474426 NDNFQ8TB73 568 aa3.46□□□□□ -1.85
UBR3-208ENST00000474426 SNX29Q8TEQ0 813 aa3.46□□□□□ -1.85
UBR3-208ENST00000474426 WFIKKN2Q8TEU8 576 aa3.46□□□□□ -1.85
UBR3-208ENST00000474426 NAT14Q8WUY8 206 aa3.46□□□□□ -1.85
UBR3-208ENST00000474426 JADE3Q92613 823 aa3.46□□□□□ -1.85
UBR3-208ENST00000474426 RAB24Q969Q5 203 aa3.46□□□□□ -1.85
UBR3-208ENST00000474426 RFT1Q96AA3 541 aa3.46□□□□□ -1.85
UBR3-208ENST00000474426 PERPQ96FX8 193 aa3.46□□□□□ -1.85
UBR3-208ENST00000474426 CDCA7LQ96GN5 454 aa3.46□□□□□ -1.85
UBR3-208ENST00000474426 TMEM169Q96HH4 297 aa3.46□□□□□ -1.85
UBR3-208ENST00000474426 B3GALT6Q96L58 329 aa3.46□□□□□ -1.85
UBR3-208ENST00000474426 C12orf66Q96MD2 445 aa3.46□□□□□ -1.85
UBR3-208ENST00000474426 PANX1Q96RD7 426 aa3.46□□□□□ -1.85
UBR3-208ENST00000474426 TAAR1Q96RJ0 339 aa3.46□□□□□ -1.85
UBR3-208ENST00000474426 KCNK16Q96T55 309 aa3.46□□□□□ -1.85
UBR3-208ENST00000474426 SLC12A9Q9BXP2 914 aa3.46□□□□□ -1.85
UBR3-208ENST00000474426 HDHD2Q9H0R4 259 aa3.46□□□□□ -1.85
UBR3-208ENST00000474426 NUP62CLQ9H1M0 184 aa3.46□□□□□ -1.85
UBR3-208ENST00000474426 EPC1Q9H2F5 836 aa3.46□□□□□ -1.85
UBR3-208ENST00000474426 GGNBP2Q9H3C7 697 aa3.46□□□□□ -1.85
UBR3-208ENST00000474426 C14orf93Q9H972 538 aaKnown RBP3.46□□□□□ -1.85
UBR3-208ENST00000474426 MLXIPQ9HAP2 919 aa3.46□□□□□ -1.85
UBR3-208ENST00000474426 ZNF302Q9NR11 478 aa3.46□□□□□ -1.85
UBR3-208ENST00000474426 MS4A12Q9NXJ0 267 aa3.46□□□□□ -1.85
UBR3-208ENST00000474426 ANKMY1Q9P2S6 941 aa3.46□□□□□ -1.85
UBR3-208ENST00000474426 DAPK2Q9UIK4 370 aa3.46□□□□□ -1.85
UBR3-208ENST00000474426 SCOCQ9UIL1 159 aa3.46□□□□□ -1.85
UBR3-208ENST00000474426 XDHP47989 1333 aa3.46□□□□□ -1.86
UBR3-208ENST00000474426 A0A1W2PQH9 124 aa3.46□□□□□ -1.86
UBR3-208ENST00000474426 H0Y8G0 127 aa3.46□□□□□ -1.86
UBR3-208ENST00000474426 LGALS8O00214 317 aa3.46□□□□□ -1.86
UBR3-208ENST00000474426 GATBO75879 557 aaKnown RBP3.46□□□□□ -1.86
UBR3-208ENST00000474426 UNC5CO95185 931 aa3.46□□□□□ -1.86
UBR3-208ENST00000474426 PF4P02776 101 aa3.46□□□□□ -1.86
UBR3-208ENST00000474426 TP53P04637 393 aaPredicted RBP3.46□□□□□ -1.86
UBR3-208ENST00000474426 MMP3P08254 477 aa3.46□□□□□ -1.86
UBR3-208ENST00000474426 ETS2P15036 469 aa3.46□□□□□ -1.86
UBR3-208ENST00000474426 PNLIPP16233 465 aa3.46□□□□□ -1.86
UBR3-208ENST00000474426 PTPN1P18031 435 aaKnown RBP3.46□□□□□ -1.86
UBR3-208ENST00000474426 DRD5P21918 477 aa3.46□□□□□ -1.86
UBR3-208ENST00000474426 PSMA5P28066 241 aa3.46□□□□□ -1.86
UBR3-208ENST00000474426 CD40LGP29965 261 aa3.46□□□□□ -1.86
UBR3-208ENST00000474426 HOXC8P31273 242 aa3.46□□□□□ -1.86
UBR3-208ENST00000474426 GRIA2P42262 883 aa3.46□□□□□ -1.86
UBR3-208ENST00000474426 RAD23BP54727 409 aa3.46□□□□□ -1.86
UBR3-208ENST00000474426 PSMD4P55036 377 aaKnown RBP3.46□□□□□ -1.86
UBR3-208ENST00000474426 CXCR4P61073 352 aa3.46□□□□□ -1.86
UBR3-208ENST00000474426 GALK2Q01415 458 aa3.46□□□□□ -1.86
UBR3-208ENST00000474426 GALNT2Q10471 571 aa3.46□□□□□ -1.86
UBR3-208ENST00000474426 SEC23AQ15436 765 aa3.46□□□□□ -1.86
UBR3-208ENST00000474426 BEND3Q5T5X7 828 aa3.46□□□□□ -1.86
UBR3-208ENST00000474426 ETFRF1Q6IPR1 90 aa3.46□□□□□ -1.86
UBR3-208ENST00000474426 HMBOX1Q6NT76 420 aa3.46□□□□□ -1.86
UBR3-208ENST00000474426 C16orf46Q6P387 395 aa3.46□□□□□ -1.86
UBR3-208ENST00000474426 CCDC137Q6PK04 289 aaKnown RBP3.46□□□□□ -1.86
UBR3-208ENST00000474426 CYP20A1Q6UW02 462 aa3.46□□□□□ -1.86
UBR3-208ENST00000474426 LINC00696Q6ZRV3 163 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms