RNA–Protein interactions for RNA: ENST00000474067.5

SNX13-206, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-206ENST00000474067 ARHGAP6O43182 974 aa20.24■□□□□ 0.83
SNX13-206ENST00000474067 PSMD3O43242 534 aa20.24■□□□□ 0.83
SNX13-206ENST00000474067 PYGMP11217 842 aa20.24■□□□□ 0.83
SNX13-206ENST00000474067 CD82P27701 267 aa20.24■□□□□ 0.83
SNX13-206ENST00000474067 PDX1P52945 283 aa20.24■□□□□ 0.83
SNX13-206ENST00000474067 EPHA4P54764 986 aa20.24■□□□□ 0.83
SNX13-206ENST00000474067 AMZ1Q400G9 498 aa20.24■□□□□ 0.83
SNX13-206ENST00000474067 SEL1L2Q5TEA6 688 aa20.24■□□□□ 0.83
SNX13-206ENST00000474067 TMEM139Q8IV31 216 aa20.24■□□□□ 0.83
SNX13-206ENST00000474067 OR4D9Q8NGE8 314 aa20.24■□□□□ 0.83
SNX13-206ENST00000474067 EID2BQ96D98 161 aa20.24■□□□□ 0.83
SNX13-206ENST00000474067 OXNAD1Q96HP4 312 aaPredicted RBP20.24■□□□□ 0.83
SNX13-206ENST00000474067 ZNF514Q96K75 400 aaPredicted RBP20.24■□□□□ 0.83
SNX13-206ENST00000474067 LOXL2Q9Y4K0 774 aa20.24■□□□□ 0.83
SNX13-206ENST00000474067 OAS3Q9Y6K5 1087 aaKnown RBP20.24■□□□□ 0.83
SNX13-206ENST00000474067 APC2O95996 2303 aa20.24■□□□□ 0.83
SNX13-206ENST00000474067 GLYATL1P3A0A0U1RQE8 302 aa20.23■□□□□ 0.83
SNX13-206ENST00000474067 ZNF8P17098 575 aaPredicted RBP20.23■□□□□ 0.83
SNX13-206ENST00000474067 LPOP22079 712 aaPredicted RBP20.23■□□□□ 0.83
SNX13-206ENST00000474067 UGT1A5P35504 534 aa20.23■□□□□ 0.83
SNX13-206ENST00000474067 TAF1AQ15573 450 aaPredicted RBP20.23■□□□□ 0.83
SNX13-206ENST00000474067 IYDQ6PHW0 289 aa20.23■□□□□ 0.83
SNX13-206ENST00000474067 ARHGEF18Q6ZSZ5 1173 aa20.23■□□□□ 0.83
SNX13-206ENST00000474067 ADGRG6Q86SQ4 1221 aa20.23■□□□□ 0.83
SNX13-206ENST00000474067 TRIM48Q8IWZ4 208 aa20.23■□□□□ 0.83
SNX13-206ENST00000474067 SPACA3Q8IXA5 215 aa20.23■□□□□ 0.83
SNX13-206ENST00000474067 RBM12BQ8IXT5 1001 aaKnown RBP20.23■□□□□ 0.83
SNX13-206ENST00000474067 SLC37A2Q8TED4 501 aa20.23■□□□□ 0.83
SNX13-206ENST00000474067 ALG3Q92685 438 aa20.23■□□□□ 0.83
SNX13-206ENST00000474067 ALS2CR12Q96Q35 445 aa20.23■□□□□ 0.83
SNX13-206ENST00000474067 FOXP3Q9BZS1 431 aa20.23■□□□□ 0.83
SNX13-206ENST00000474067 OSGEPL1Q9H4B0 414 aa20.23■□□□□ 0.83
SNX13-206ENST00000474067 IL17CQ9P0M4 197 aa20.23■□□□□ 0.83
SNX13-206ENST00000474067 KCNK6Q9Y257 313 aa20.23■□□□□ 0.83
SNX13-206ENST00000474067 SPO11Q9Y5K1 396 aa20.23■□□□□ 0.83
SNX13-206ENST00000474067 DNMT3AQ9Y6K1 912 aaPredicted RBP20.23■□□□□ 0.83
SNX13-206ENST00000474067 SPEGQ15772 3267 aa20.23■□□□□ 0.83
SNX13-206ENST00000474067 ARHGEF17Q96PE2 2063 aaPredicted RBP20.23■□□□□ 0.83
SNX13-206ENST00000474067 ASPMQ8IZT6 3477 aa20.22■□□□□ 0.83
SNX13-206ENST00000474067 TEX51A0A1B0GUA7 166 aa20.22■□□□□ 0.83
SNX13-206ENST00000474067 EIF4E1BA6NMX2 242 aaKnown RBP20.22■□□□□ 0.83
SNX13-206ENST00000474067 NVLO15381 856 aaKnown RBP20.22■□□□□ 0.83
SNX13-206ENST00000474067 IDSP22304 550 aa20.22■□□□□ 0.83
SNX13-206ENST00000474067 HADHAP40939 763 aa20.22■□□□□ 0.83
SNX13-206ENST00000474067 HALP42357 657 aa20.22■□□□□ 0.83
SNX13-206ENST00000474067 OR1D5P58170 312 aa20.22■□□□□ 0.83
SNX13-206ENST00000474067 GPR155Q7Z3F1 870 aa20.22■□□□□ 0.83
SNX13-206ENST00000474067 B3GNT8Q7Z7M8 397 aa20.22■□□□□ 0.83
SNX13-206ENST00000474067 JAMLQ86YT9 394 aa20.22■□□□□ 0.83
SNX13-206ENST00000474067 SLITRK4Q8IW52 837 aa20.22■□□□□ 0.83
SNX13-206ENST00000474067 PTCD2Q8WV60 388 aaKnown RBP20.22■□□□□ 0.83
SNX13-206ENST00000474067 HEXDCQ8WVB3 486 aa20.22■□□□□ 0.83
SNX13-206ENST00000474067 DESI2Q9BSY9 194 aa20.22■□□□□ 0.83
SNX13-206ENST00000474067 FICDQ9BVA6 458 aa20.22■□□□□ 0.83
SNX13-206ENST00000474067 KLC4Q9NSK0 619 aa20.22■□□□□ 0.83
SNX13-206ENST00000474067 SMOXQ9NWM0 555 aa20.22■□□□□ 0.83
SNX13-206ENST00000474067 PISDQ9UG56 409 aa20.22■□□□□ 0.83
SNX13-206ENST00000474067 ACSL6Q9UKU0 697 aa20.22■□□□□ 0.83
SNX13-206ENST00000474067 ATXN7L1Q9ULK2 861 aaPredicted RBP20.22■□□□□ 0.83
SNX13-206ENST00000474067 PCDHB11Q9Y5F2 797 aa20.22■□□□□ 0.83
SNX13-206ENST00000474067 COL27A1Q8IZC6 1860 aaPredicted RBP20.22■□□□□ 0.83
SNX13-206ENST00000474067 IGHV1OR21-1A0A087WYE8 117 aa20.21■□□□□ 0.83
SNX13-206ENST00000474067 PPM1DO15297 605 aa20.21■□□□□ 0.83
SNX13-206ENST00000474067 KLK10O43240 276 aa20.21■□□□□ 0.83
SNX13-206ENST00000474067 B4GAT1O43505 415 aa20.21■□□□□ 0.83
SNX13-206ENST00000474067 SNX2O60749 519 aa20.21■□□□□ 0.83
SNX13-206ENST00000474067 GAS8O95995 478 aa20.21■□□□□ 0.83
SNX13-206ENST00000474067 RALBP11234 206 aa20.21■□□□□ 0.83
SNX13-206ENST00000474067 ZNF7P17097 686 aaPredicted RBP20.21■□□□□ 0.83
SNX13-206ENST00000474067 STIP1P31948 543 aaKnown RBP20.21■□□□□ 0.83
SNX13-206ENST00000474067 CSTF2P33240 577 aaKnown RBP eCLIP20.21■□□□□ 0.83
SNX13-206ENST00000474067 LIMK2P53671 638 aa20.21■□□□□ 0.83
SNX13-206ENST00000474067 TLE3Q04726 772 aa20.21■□□□□ 0.83
SNX13-206ENST00000474067 TMEM115Q12893 351 aaPredicted RBP20.21■□□□□ 0.83
SNX13-206ENST00000474067 LONRF2Q1L5Z9 754 aa20.21■□□□□ 0.83
SNX13-206ENST00000474067 PARP6Q2NL67 630 aa20.21■□□□□ 0.83
SNX13-206ENST00000474067 TMEM71Q6P5X7 295 aa20.21■□□□□ 0.83
SNX13-206ENST00000474067 TRAPPC5Q8IUR0 188 aa20.21■□□□□ 0.83
SNX13-206ENST00000474067 TTC30BQ8N4P2 665 aa20.21■□□□□ 0.83
SNX13-206ENST00000474067 AGBL5Q8NDL9 886 aa20.21■□□□□ 0.83
SNX13-206ENST00000474067 PRR11Q96HE9 360 aaPredicted RBP20.21■□□□□ 0.83
SNX13-206ENST00000474067 HES6Q96HZ4 224 aa20.21■□□□□ 0.83
SNX13-206ENST00000474067 FCRL3Q96P31 734 aaPredicted RBP20.21■□□□□ 0.83
SNX13-206ENST00000474067 UBL7Q96S82 380 aaPredicted RBP20.21■□□□□ 0.83
SNX13-206ENST00000474067 UCK1Q9HA47 277 aa20.21■□□□□ 0.83
SNX13-206ENST00000474067 BPIFA1Q9NP55 256 aa20.21■□□□□ 0.83
SNX13-206ENST00000474067 IL26Q9NPH9 171 aa20.21■□□□□ 0.83
SNX13-206ENST00000474067 TBC1D29Q9UFV1 150 aa20.21■□□□□ 0.83
SNX13-206ENST00000474067 PRKAB1Q9Y478 270 aa20.21■□□□□ 0.83
SNX13-206ENST00000474067 ADGRG1Q9Y653 693 aa20.21■□□□□ 0.83
SNX13-206ENST00000474067 PDZK1P1A8MUH7 402 aa20.2■□□□□ 0.82
SNX13-206ENST00000474067 FTCDO95954 541 aa20.2■□□□□ 0.82
SNX13-206ENST00000474067 VIPP01282 170 aa20.2■□□□□ 0.82
SNX13-206ENST00000474067 CCDC175P0C221 793 aa20.2■□□□□ 0.82
SNX13-206ENST00000474067 PSMB4P28070 264 aa20.2■□□□□ 0.82
SNX13-206ENST00000474067 CD1CP29017 333 aa20.2■□□□□ 0.82
SNX13-206ENST00000474067 CHRNA4P43681 627 aa20.2■□□□□ 0.82
SNX13-206ENST00000474067 ATP13A5Q4VNC0 1218 aa20.2■□□□□ 0.82
SNX13-206ENST00000474067 CHCHD2P9Q5T1J5 151 aaPredicted RBP20.2■□□□□ 0.82
SNX13-206ENST00000474067 WDR74Q6RFH5 385 aaPredicted RBP20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms