RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 CYP4X1Q8N118 509 aa10.18□□□□□ -0.78
PRPF38A-202ENST00000474048 DDHD1Q8NEL9 900 aa10.18□□□□□ -0.78
PRPF38A-202ENST00000474048 BTN2A2Q8WVV5 523 aa10.18□□□□□ -0.78
PRPF38A-202ENST00000474048 LPGAT1Q92604 370 aa10.18□□□□□ -0.78
PRPF38A-202ENST00000474048 EDAQ92838 391 aa10.18□□□□□ -0.78
PRPF38A-202ENST00000474048 EID2BQ96D98 161 aa10.18□□□□□ -0.78
PRPF38A-202ENST00000474048 HIC2Q96JB3 615 aa10.18□□□□□ -0.78
PRPF38A-202ENST00000474048 ZNF514Q96K75 400 aaPredicted RBP10.18□□□□□ -0.78
PRPF38A-202ENST00000474048 AARSD1Q9BTE6 412 aaKnown RBP10.18□□□□□ -0.78
PRPF38A-202ENST00000474048 SLC17A9Q9BYT1 436 aa10.18□□□□□ -0.78
PRPF38A-202ENST00000474048 TPSD1Q9BZJ3 242 aa10.18□□□□□ -0.78
PRPF38A-202ENST00000474048 SLC13A1Q9BZW2 595 aa10.18□□□□□ -0.78
PRPF38A-202ENST00000474048 WDR26Q9H7D7 661 aa10.18□□□□□ -0.78
PRPF38A-202ENST00000474048 CAB39LQ9H9S4 337 aa10.18□□□□□ -0.78
PRPF38A-202ENST00000474048 POPDC3Q9HBV1 291 aa10.18□□□□□ -0.78
PRPF38A-202ENST00000474048 ITM2CQ9NQX7 267 aa10.18□□□□□ -0.78
PRPF38A-202ENST00000474048 DCDC2Q9UHG0 476 aa10.18□□□□□ -0.78
PRPF38A-202ENST00000474048 GRID1Q9ULK0 1009 aa10.18□□□□□ -0.78
PRPF38A-202ENST00000474048 ACOT9Q9Y305 439 aa10.18□□□□□ -0.78
PRPF38A-202ENST00000474048 VWA7Q9Y334 891 aa10.18□□□□□ -0.78
PRPF38A-202ENST00000474048 TRBV5-4A0A0C4DH59 114 aa10.17□□□□□ -0.78
PRPF38A-202ENST00000474048 A0A1W2PPM1 405 aa10.17□□□□□ -0.78
PRPF38A-202ENST00000474048 TMEM120BA0PK00 339 aa10.17□□□□□ -0.78
PRPF38A-202ENST00000474048 SHISA7A6NL88 538 aa10.17□□□□□ -0.78
PRPF38A-202ENST00000474048 A6NNZ2 444 aa10.17□□□□□ -0.78
PRPF38A-202ENST00000474048 MEI4A8MW99 385 aa10.17□□□□□ -0.78
PRPF38A-202ENST00000474048 TM9SF1O15321 606 aa10.17□□□□□ -0.78
PRPF38A-202ENST00000474048 SLC31A1O15431 190 aa10.17□□□□□ -0.78
PRPF38A-202ENST00000474048 SPINT1O43278 529 aa10.17□□□□□ -0.78
PRPF38A-202ENST00000474048 LAMTOR5O43504 91 aa10.17□□□□□ -0.78
PRPF38A-202ENST00000474048 VEGFDO43915 354 aa10.17□□□□□ -0.78
PRPF38A-202ENST00000474048 DNAJC6O75061 913 aa10.17□□□□□ -0.78
PRPF38A-202ENST00000474048 AP2A2O94973 939 aa10.17□□□□□ -0.78
PRPF38A-202ENST00000474048 TRIM16O95361 564 aa10.17□□□□□ -0.78
PRPF38A-202ENST00000474048 PAK4O96013 591 aaPredicted RBP10.17□□□□□ -0.78
PRPF38A-202ENST00000474048 C1QAP02745 245 aa10.17□□□□□ -0.78
PRPF38A-202ENST00000474048 APOA4P06727 396 aa10.17□□□□□ -0.78
PRPF38A-202ENST00000474048 GSTA1P08263 222 aa10.17□□□□□ -0.78
PRPF38A-202ENST00000474048 F7P08709 466 aaPredicted RBP10.17□□□□□ -0.78
PRPF38A-202ENST00000474048 PRSS56P0CW18 603 aa10.17□□□□□ -0.78
PRPF38A-202ENST00000474048 COL6A2P12110 1019 aa10.17□□□□□ -0.78
PRPF38A-202ENST00000474048 ATP1B2P14415 290 aaPredicted RBP10.17□□□□□ -0.78
PRPF38A-202ENST00000474048 KELP23276 732 aa10.17□□□□□ -0.78
PRPF38A-202ENST00000474048 HTR1BP28222 390 aa10.17□□□□□ -0.78
PRPF38A-202ENST00000474048 CDKN1CP49918 316 aaPredicted RBP10.17□□□□□ -0.78
PRPF38A-202ENST00000474048 ATP1A2P50993 1020 aa10.17□□□□□ -0.78
PRPF38A-202ENST00000474048 ADARP55265 1226 aaKnown RBP10.17□□□□□ -0.78
PRPF38A-202ENST00000474048 TAS2R38P59533 333 aa10.17□□□□□ -0.78
PRPF38A-202ENST00000474048 MTAPQ13126 283 aa10.17□□□□□ -0.78
PRPF38A-202ENST00000474048 TUBB8Q3ZCM7 444 aa10.17□□□□□ -0.78
PRPF38A-202ENST00000474048 SEL1L3Q68CR1 1132 aa10.17□□□□□ -0.78
PRPF38A-202ENST00000474048 LRRC8EQ6NSJ5 796 aa10.17□□□□□ -0.78
PRPF38A-202ENST00000474048 SLC36A4Q6YBV0 504 aa10.17□□□□□ -0.78
PRPF38A-202ENST00000474048 DET1Q7L5Y6 550 aa10.17□□□□□ -0.78
PRPF38A-202ENST00000474048 OTOAQ7RTW8 1153 aa10.17□□□□□ -0.78
PRPF38A-202ENST00000474048 CMC1Q7Z7K0 106 aa10.17□□□□□ -0.78
PRPF38A-202ENST00000474048 NLRP8Q86W28 1048 aa10.17□□□□□ -0.78
PRPF38A-202ENST00000474048 TRIM69Q86WT6 500 aa10.17□□□□□ -0.78
PRPF38A-202ENST00000474048 TRAPPC5Q8IUR0 188 aa10.17□□□□□ -0.78
PRPF38A-202ENST00000474048 PIANPQ8IYJ0 282 aa10.17□□□□□ -0.78
PRPF38A-202ENST00000474048 NKAPQ8N5F7 415 aaKnown RBP10.17□□□□□ -0.78
PRPF38A-202ENST00000474048 DENND6BQ8NEG7 585 aa10.17□□□□□ -0.78
PRPF38A-202ENST00000474048 PPP1R14CQ8TAE6 165 aa10.17□□□□□ -0.78
PRPF38A-202ENST00000474048 MGARPQ8TDB4 240 aa10.17□□□□□ -0.78
PRPF38A-202ENST00000474048 SKA2Q8WVK7 121 aaPredicted RBP10.17□□□□□ -0.78
PRPF38A-202ENST00000474048 KCNJ9Q92806 393 aa10.17□□□□□ -0.78
PRPF38A-202ENST00000474048 KLK6Q92876 244 aa10.17□□□□□ -0.78
PRPF38A-202ENST00000474048 VOPP1Q96AW1 172 aa10.17□□□□□ -0.78
PRPF38A-202ENST00000474048 CLDN23Q96B33 292 aa10.17□□□□□ -0.78
PRPF38A-202ENST00000474048 TOE1Q96GM8 510 aaKnown RBP10.17□□□□□ -0.78
PRPF38A-202ENST00000474048 INTS9Q9NV88 658 aaKnown RBP10.17□□□□□ -0.78
PRPF38A-202ENST00000474048 EURLQ9NYK6 297 aa10.17□□□□□ -0.78
PRPF38A-202ENST00000474048 USP36Q9P275 1121 aaKnown RBP10.17□□□□□ -0.78
PRPF38A-202ENST00000474048 TRPM6Q9BX84 2022 aa10.17□□□□□ -0.78
PRPF38A-202ENST00000474048 LRRK1Q38SD2 2015 aa10.16□□□□□ -0.78
PRPF38A-202ENST00000474048 GAPDHSO14556 408 aaPredicted RBP10.16□□□□□ -0.78
PRPF38A-202ENST00000474048 AXIN1O15169 862 aa10.16□□□□□ -0.78
PRPF38A-202ENST00000474048 PRPF4O43172 522 aaKnown RBP eCLIP10.16□□□□□ -0.78
PRPF38A-202ENST00000474048 PHGDHO43175 533 aaKnown RBP10.16□□□□□ -0.78
PRPF38A-202ENST00000474048 GPR39O43194 453 aa10.16□□□□□ -0.78
PRPF38A-202ENST00000474048 OR1I1O60431 355 aa10.16□□□□□ -0.78
PRPF38A-202ENST00000474048 CDK14O94921 469 aa10.16□□□□□ -0.78
PRPF38A-202ENST00000474048 ALDOAP04075 364 aaKnown RBP10.16□□□□□ -0.78
PRPF38A-202ENST00000474048 VCLP18206 1134 aa10.16□□□□□ -0.78
PRPF38A-202ENST00000474048 HNRNPA2B1P22626 353 aaKnown RBP10.16□□□□□ -0.78
PRPF38A-202ENST00000474048 ACSL1P33121 698 aa10.16□□□□□ -0.78
PRPF38A-202ENST00000474048 THOP1P52888 689 aa10.16□□□□□ -0.78
PRPF38A-202ENST00000474048 IL9RQ01113 521 aa10.16□□□□□ -0.78
PRPF38A-202ENST00000474048 AGERQ15109 404 aa10.16□□□□□ -0.78
PRPF38A-202ENST00000474048 IRF4Q15306 451 aa10.16□□□□□ -0.78
PRPF38A-202ENST00000474048 INSCQ1MX18 579 aa10.16□□□□□ -0.78
PRPF38A-202ENST00000474048 CCDC153Q494R4 210 aa10.16□□□□□ -0.78
PRPF38A-202ENST00000474048 ZNF789Q5FWF6 425 aa10.16□□□□□ -0.78
PRPF38A-202ENST00000474048 RBM20Q5T481 1227 aaKnown RBP10.16□□□□□ -0.78
PRPF38A-202ENST00000474048 KIAA0895LQ68EN5 471 aa10.16□□□□□ -0.78
PRPF38A-202ENST00000474048 PNCKQ6P2M8 343 aa10.16□□□□□ -0.78
PRPF38A-202ENST00000474048 DOK6Q6PKX4 331 aa10.16□□□□□ -0.78
PRPF38A-202ENST00000474048 ADAMTSL4Q6UY14 1074 aa10.16□□□□□ -0.78
PRPF38A-202ENST00000474048 KDM7AQ6ZMT4 941 aa10.16□□□□□ -0.78
PRPF38A-202ENST00000474048 RFLNAQ6ZTI6 216 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms