RNA–Protein interactions for RNA: ENST00000472896.5

APTX-216, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,759 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-216ENST00000472896 GNG2P59768 71 aa10.03□□□□□ -0.8
APTX-216ENST00000472896 C19orf57Q0VDD7 668 aa10.03□□□□□ -0.8
APTX-216ENST00000472896 ZNF528Q3MIS6 628 aa10.03□□□□□ -0.8
APTX-216ENST00000472896 CYBRD1Q53TN4 286 aa10.03□□□□□ -0.8
APTX-216ENST00000472896 XKR9Q5GH70 373 aa10.03□□□□□ -0.8
APTX-216ENST00000472896 PPM1JQ5JR12 505 aa10.03□□□□□ -0.8
APTX-216ENST00000472896 XAF1Q6GPH4 301 aa10.03□□□□□ -0.8
APTX-216ENST00000472896 LCN8Q6JVE9 175 aa10.03□□□□□ -0.8
APTX-216ENST00000472896 PARM1Q6UWI2 310 aa10.03□□□□□ -0.8
APTX-216ENST00000472896 GK5Q6ZS86 529 aa10.03□□□□□ -0.8
APTX-216ENST00000472896 PTAR1Q7Z6K3 402 aaPredicted RBP10.03□□□□□ -0.8
APTX-216ENST00000472896 PHF10Q8WUB8 498 aaKnown RBP10.03□□□□□ -0.8
APTX-216ENST00000472896 HDAC2Q92769 488 aaKnown RBP10.03□□□□□ -0.8
APTX-216ENST00000472896 VPS33AQ96AX1 596 aa10.03□□□□□ -0.8
APTX-216ENST00000472896 NACC2Q96BF6 587 aa10.03□□□□□ -0.8
APTX-216ENST00000472896 PGBD4Q96DM1 585 aa10.03□□□□□ -0.8
APTX-216ENST00000472896 FBXL20Q96IG2 436 aa10.03□□□□□ -0.8
APTX-216ENST00000472896 HOPXQ9BPY8 73 aaPredicted RBP10.03□□□□□ -0.8
APTX-216ENST00000472896 MUC3BQ9H195 1237 aa10.03□□□□□ -0.8
APTX-216ENST00000472896 HPS4Q9NQG7 708 aa10.03□□□□□ -0.8
APTX-216ENST00000472896 NECTIN3Q9NQS3 549 aa10.03□□□□□ -0.8
APTX-216ENST00000472896 PCSK1NQ9UHG2 260 aa10.03□□□□□ -0.8
APTX-216ENST00000472896 ZNF229Q9UJW7 825 aa10.03□□□□□ -0.8
APTX-216ENST00000472896 SLC27A5Q9Y2P5 690 aa10.03□□□□□ -0.8
APTX-216ENST00000472896 PRG3Q9Y2Y8 225 aaPredicted RBP10.03□□□□□ -0.8
APTX-216ENST00000472896 VWA7Q9Y334 891 aa10.03□□□□□ -0.8
APTX-216ENST00000472896 A0A096LPK6 155 aa10.03□□□□□ -0.8
APTX-216ENST00000472896 IGKV6-21A0A0C4DH24 114 aa10.03□□□□□ -0.8
APTX-216ENST00000472896 LOC105371267A0A1B0GV96 52 aa10.03□□□□□ -0.8
APTX-216ENST00000472896 CARNS1A5YM72 827 aa10.03□□□□□ -0.8
APTX-216ENST00000472896 MRASO14807 208 aa10.03□□□□□ -0.8
APTX-216ENST00000472896 TIMM44O43615 452 aa10.03□□□□□ -0.8
APTX-216ENST00000472896 GAS2O43903 313 aaKnown RBP10.03□□□□□ -0.8
APTX-216ENST00000472896 SYNCRIPO60506 623 aaKnown RBP10.03□□□□□ -0.8
APTX-216ENST00000472896 TPPPO94811 219 aa10.03□□□□□ -0.8
APTX-216ENST00000472896 GLUD1P00367 558 aa10.03□□□□□ -0.8
APTX-216ENST00000472896 ALBP02768 609 aa10.03□□□□□ -0.8
APTX-216ENST00000472896 HSD17B1P14061 328 aa10.03□□□□□ -0.8
APTX-216ENST00000472896 M6PRP20645 277 aa10.03□□□□□ -0.8
APTX-216ENST00000472896 CD72P21854 359 aa10.03□□□□□ -0.8
APTX-216ENST00000472896 EEF1B2P24534 225 aaKnown RBP10.03□□□□□ -0.8
APTX-216ENST00000472896 POLR2IP36954 125 aaKnown RBP10.03□□□□□ -0.8
APTX-216ENST00000472896 GPD2P43304 727 aa10.03□□□□□ -0.8
APTX-216ENST00000472896 GRIA4P48058 902 aa10.03□□□□□ -0.8
APTX-216ENST00000472896 LIG4P49917 911 aa10.03□□□□□ -0.8
APTX-216ENST00000472896 JAK3P52333 1124 aa10.03□□□□□ -0.8
APTX-216ENST00000472896 PLA2G16P53816 162 aa10.03□□□□□ -0.8
APTX-216ENST00000472896 CSE1LP55060 971 aaKnown RBP10.03□□□□□ -0.8
APTX-216ENST00000472896 NTHL1P78549 312 aa10.03□□□□□ -0.8
APTX-216ENST00000472896 ECT2LQ008S8 904 aa10.03□□□□□ -0.8
APTX-216ENST00000472896 IFITM3Q01628 133 aa10.03□□□□□ -0.8
APTX-216ENST00000472896 PSMD5Q16401 504 aa10.03□□□□□ -0.8
APTX-216ENST00000472896 ZNF181Q2M3W8 571 aa10.03□□□□□ -0.8
APTX-216ENST00000472896 PTPN20Q4JDL3 420 aa10.03□□□□□ -0.8
APTX-216ENST00000472896 BOLA3Q53S33 107 aa10.03□□□□□ -0.8
APTX-216ENST00000472896 ARL13AQ5H913 290 aaPredicted RBP10.03□□□□□ -0.8
APTX-216ENST00000472896 WDR45BQ5MNZ6 344 aa10.03□□□□□ -0.8
APTX-216ENST00000472896 UBXN11Q5T124 520 aa10.03□□□□□ -0.8
APTX-216ENST00000472896 LILRA6Q6PI73 481 aa10.03□□□□□ -0.8
APTX-216ENST00000472896 TSSK4Q6SA08 328 aa10.03□□□□□ -0.8
APTX-216ENST00000472896 CYP2R1Q6VVX0 501 aa10.03□□□□□ -0.8
APTX-216ENST00000472896 GET4Q7L5D6 327 aaPredicted RBP10.03□□□□□ -0.8
APTX-216ENST00000472896 DSG4Q86SJ6 1040 aa10.03□□□□□ -0.8
APTX-216ENST00000472896 SLCO6A1Q86UG4 719 aa10.03□□□□□ -0.8
APTX-216ENST00000472896 SCML4Q8N228 414 aa10.03□□□□□ -0.8
APTX-216ENST00000472896 ZBTB44Q8NCP5 570 aa10.03□□□□□ -0.8
APTX-216ENST00000472896 PAPD5Q8NDF8 572 aaKnown RBP10.03□□□□□ -0.8
APTX-216ENST00000472896 SIMC1Q8NDZ2 872 aa10.03□□□□□ -0.8
APTX-216ENST00000472896 TRPV3Q8NET8 790 aa10.03□□□□□ -0.8
APTX-216ENST00000472896 BPIFB6Q8NFQ5 453 aa10.03□□□□□ -0.8
APTX-216ENST00000472896 OR6Q1Q8NGQ2 317 aa10.03□□□□□ -0.8
APTX-216ENST00000472896 TTC9Q92623 222 aa10.03□□□□□ -0.8
APTX-216ENST00000472896 NELL1Q92832 810 aa10.03□□□□□ -0.8
APTX-216ENST00000472896 FGF14Q92915 247 aa10.03□□□□□ -0.8
APTX-216ENST00000472896 MUL1Q969V5 352 aa10.03□□□□□ -0.8
APTX-216ENST00000472896 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.03□□□□□ -0.8
APTX-216ENST00000472896 HDAC11Q96DB2 347 aa10.03□□□□□ -0.8
APTX-216ENST00000472896 MCRS1Q96EZ8 462 aa10.03□□□□□ -0.8
APTX-216ENST00000472896 B3GALT6Q96L58 329 aa10.03□□□□□ -0.8
APTX-216ENST00000472896 MYRFLQ96LU7 910 aa10.03□□□□□ -0.8
APTX-216ENST00000472896 TMEM175Q9BSA9 504 aa10.03□□□□□ -0.8
APTX-216ENST00000472896 KIFC3Q9BVG8 833 aa10.03□□□□□ -0.8
APTX-216ENST00000472896 MIOSQ9NXC5 875 aa10.03□□□□□ -0.8
APTX-216ENST00000472896 TBC1D14Q9P2M4 693 aa10.03□□□□□ -0.8
APTX-216ENST00000472896 KLQ9UEF7 1012 aa10.03□□□□□ -0.8
APTX-216ENST00000472896 ZNF639Q9UID6 485 aa10.03□□□□□ -0.8
APTX-216ENST00000472896 FBXO4Q9UKT5 387 aa10.03□□□□□ -0.8
APTX-216ENST00000472896 AGO2Q9UKV8 859 aaKnown RBP10.03□□□□□ -0.8
APTX-216ENST00000472896 MAGEB16A2A368 324 aa10.02□□□□□ -0.81
APTX-216ENST00000472896 FAM170BA6NMN3 283 aa10.02□□□□□ -0.81
APTX-216ENST00000472896 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.02□□□□□ -0.81
APTX-216ENST00000472896 SDHDO14521 159 aa10.02□□□□□ -0.81
APTX-216ENST00000472896 HOXC11O43248 304 aaPredicted RBP10.02□□□□□ -0.81
APTX-216ENST00000472896 LAMTOR5O43504 91 aa10.02□□□□□ -0.81
APTX-216ENST00000472896 NRP2O60462 931 aa10.02□□□□□ -0.81
APTX-216ENST00000472896 LILRB5O75023 590 aa10.02□□□□□ -0.81
APTX-216ENST00000472896 KCNH1O95259 989 aa10.02□□□□□ -0.81
APTX-216ENST00000472896 METTL18O95568 372 aa10.02□□□□□ -0.81
APTX-216ENST00000472896 CRYZL1O95825 349 aa10.02□□□□□ -0.81
APTX-216ENST00000472896 ASS1P00966 412 aaKnown RBP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms