RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 FLYWCH1Q4VC44 716 aa6.43□□□□□ -1.38
HDAC3-206ENST00000471968 ATXN7L2Q5T6C5 722 aaPredicted RBP6.43□□□□□ -1.38
HDAC3-206ENST00000471968 TMEM211Q6ICI0 200 aa6.43□□□□□ -1.38
HDAC3-206ENST00000471968 TIGD7Q6NT04 549 aaPredicted RBP6.43□□□□□ -1.38
HDAC3-206ENST00000471968 MARK2Q7KZI7 788 aaKnown RBP6.43□□□□□ -1.38
HDAC3-206ENST00000471968 TMEM151BQ8IW70 566 aa6.43□□□□□ -1.38
HDAC3-206ENST00000471968 OR2AP1Q8NGE2 309 aa6.43□□□□□ -1.38
HDAC3-206ENST00000471968 ZNF501Q96CX3 271 aaPredicted RBP6.43□□□□□ -1.38
HDAC3-206ENST00000471968 SEC16BQ96JE7 1060 aa6.43□□□□□ -1.38
HDAC3-206ENST00000471968 BEX2Q9BXY8 128 aa6.43□□□□□ -1.38
HDAC3-206ENST00000471968 DNAI2Q9GZS0 605 aa6.43□□□□□ -1.38
HDAC3-206ENST00000471968 BLOC1S4Q9NUP1 217 aa6.43□□□□□ -1.38
HDAC3-206ENST00000471968 FAM13BQ9NYF5 915 aa6.43□□□□□ -1.38
HDAC3-206ENST00000471968 TBC1D29Q9UFV1 150 aa6.43□□□□□ -1.38
HDAC3-206ENST00000471968 SLC12A6Q9UHW9 1150 aa6.43□□□□□ -1.38
HDAC3-206ENST00000471968 NOCTQ9UK39 431 aaKnown RBP6.43□□□□□ -1.38
HDAC3-206ENST00000471968 SLC17A4Q9Y2C5 497 aa6.43□□□□□ -1.38
HDAC3-206ENST00000471968 RYR2Q92736 4967 aa6.42□□□□□ -1.38
HDAC3-206ENST00000471968 CCDC66A2RUB6 948 aa6.42□□□□□ -1.38
HDAC3-206ENST00000471968 DDX3YO15523 660 aaKnown RBP6.42□□□□□ -1.38
HDAC3-206ENST00000471968 DNAJC6O75061 913 aa6.42□□□□□ -1.38
HDAC3-206ENST00000471968 ZMPSTE24O75844 475 aa6.42□□□□□ -1.38
HDAC3-206ENST00000471968 MTA2O94776 668 aa6.42□□□□□ -1.38
HDAC3-206ENST00000471968 LCA5LO95447 670 aa6.42□□□□□ -1.38
HDAC3-206ENST00000471968 FYNP06241 537 aa6.42□□□□□ -1.38
HDAC3-206ENST00000471968 PGRP06401 933 aa6.42□□□□□ -1.38
HDAC3-206ENST00000471968 ZNF30P17039 623 aa6.42□□□□□ -1.38
HDAC3-206ENST00000471968 AGXTP21549 392 aa6.42□□□□□ -1.38
HDAC3-206ENST00000471968 THBS2P35442 1172 aa6.42□□□□□ -1.38
HDAC3-206ENST00000471968 MMP12P39900 470 aa6.42□□□□□ -1.38
HDAC3-206ENST00000471968 NR1H2P55055 460 aa6.42□□□□□ -1.38
HDAC3-206ENST00000471968 SNRPD1P62314 119 aaKnown RBP6.42□□□□□ -1.38
HDAC3-206ENST00000471968 ALDH6A1Q02252 535 aaKnown RBP6.42□□□□□ -1.38
HDAC3-206ENST00000471968 SLC20A2Q08357 652 aa6.42□□□□□ -1.38
HDAC3-206ENST00000471968 POLD3Q15054 466 aaPredicted RBP6.42□□□□□ -1.38
HDAC3-206ENST00000471968 POU4F3Q15319 338 aa6.42□□□□□ -1.38
HDAC3-206ENST00000471968 ALFQ53S48 1182 aa6.42□□□□□ -1.38
HDAC3-206ENST00000471968 PRR31Q5SQ13 230 aa6.42□□□□□ -1.38
HDAC3-206ENST00000471968 LIPNQ5VXI9 398 aa6.42□□□□□ -1.38
HDAC3-206ENST00000471968 SMYD5Q6GMV2 418 aa6.42□□□□□ -1.38
HDAC3-206ENST00000471968 ERAP2Q6P179 960 aa6.42□□□□□ -1.38
HDAC3-206ENST00000471968 B4GALNT4Q76KP1 1039 aa6.42□□□□□ -1.38
HDAC3-206ENST00000471968 FGD2Q7Z6J4 655 aa6.42□□□□□ -1.38
HDAC3-206ENST00000471968 PLPP6Q8IY26 295 aa6.42□□□□□ -1.38
HDAC3-206ENST00000471968 C3orf56Q8N813 242 aa6.42□□□□□ -1.38
HDAC3-206ENST00000471968 OR2Y1Q8NGV0 311 aa6.42□□□□□ -1.38
HDAC3-206ENST00000471968 SUN3Q8TAQ9 357 aa6.42□□□□□ -1.38
HDAC3-206ENST00000471968 UBA3Q8TBC4 463 aa6.42□□□□□ -1.38
HDAC3-206ENST00000471968 FNIP1Q8TF40 1166 aa6.42□□□□□ -1.38
HDAC3-206ENST00000471968 FAM222BQ8WU58 562 aa6.42□□□□□ -1.38
HDAC3-206ENST00000471968 UBXN4Q92575 508 aa6.42□□□□□ -1.38
HDAC3-206ENST00000471968 RAD54LQ92698 747 aa6.42□□□□□ -1.38
HDAC3-206ENST00000471968 PTERQ96BW5 349 aa6.42□□□□□ -1.38
HDAC3-206ENST00000471968 NSMCE3Q96MG7 304 aa6.42□□□□□ -1.38
HDAC3-206ENST00000471968 PCMTD1Q96MG8 357 aaPredicted RBP6.42□□□□□ -1.38
HDAC3-206ENST00000471968 PIP5K1AQ99755 562 aa6.42□□□□□ -1.38
HDAC3-206ENST00000471968 TEX101Q9BY14 249 aa6.42□□□□□ -1.38
HDAC3-206ENST00000471968 SLC7A5P2Q9GIP4 190 aa6.42□□□□□ -1.38
HDAC3-206ENST00000471968 ACTR5Q9H9F9 607 aaPredicted RBP6.42□□□□□ -1.38
HDAC3-206ENST00000471968 GPN3Q9UHW5 284 aaPredicted RBP6.42□□□□□ -1.38
HDAC3-206ENST00000471968 NUP210LQ5VU65 1888 aa6.41□□□□□ -1.38
HDAC3-206ENST00000471968 KIR2DS5A0A0G2JLQ3 304 aa6.41□□□□□ -1.38
HDAC3-206ENST00000471968 A0A0G2JNG1 304 aa6.41□□□□□ -1.38
HDAC3-206ENST00000471968 GOLGA6CA6NDK9 693 aa6.41□□□□□ -1.38
HDAC3-206ENST00000471968 GOLGA6BA6NDN3 693 aa6.41□□□□□ -1.38
HDAC3-206ENST00000471968 RNF223E7ERA6 249 aa6.41□□□□□ -1.38
HDAC3-206ENST00000471968 KIR2DS3K7RE56 304 aa6.41□□□□□ -1.38
HDAC3-206ENST00000471968 ASNA1O43681 348 aa6.41□□□□□ -1.38
HDAC3-206ENST00000471968 PRAMEF1O95521 474 aa6.41□□□□□ -1.38
HDAC3-206ENST00000471968 CD160O95971 181 aa6.41□□□□□ -1.38
HDAC3-206ENST00000471968 GSRP00390 522 aa6.41□□□□□ -1.38
HDAC3-206ENST00000471968 UMODP07911 640 aa6.41□□□□□ -1.38
HDAC3-206ENST00000471968 GOLGA6DP0CG33 693 aa6.41□□□□□ -1.38
HDAC3-206ENST00000471968 PRKCSHP14314 528 aaPredicted RBP6.41□□□□□ -1.38
HDAC3-206ENST00000471968 UQCRC1P31930 480 aa6.41□□□□□ -1.38
HDAC3-206ENST00000471968 RGS7P49802 495 aa6.41□□□□□ -1.38
HDAC3-206ENST00000471968 CYP2J2P51589 502 aa6.41□□□□□ -1.38
HDAC3-206ENST00000471968 SUOXP51687 545 aa6.41□□□□□ -1.38
HDAC3-206ENST00000471968 CDK3Q00526 305 aa6.41□□□□□ -1.38
HDAC3-206ENST00000471968 BST2Q10589 180 aaKnown RBP6.41□□□□□ -1.38
HDAC3-206ENST00000471968 PMPCAQ10713 525 aa6.41□□□□□ -1.38
HDAC3-206ENST00000471968 KIR2DS5Q14953 304 aa6.41□□□□□ -1.38
HDAC3-206ENST00000471968 DAZAP2Q15038 168 aaPredicted RBP6.41□□□□□ -1.38
HDAC3-206ENST00000471968 PLCL1Q15111 1095 aa6.41□□□□□ -1.38
HDAC3-206ENST00000471968 UGP2Q16851 508 aa6.41□□□□□ -1.38
HDAC3-206ENST00000471968 PYCR3Q53H96 274 aa6.41□□□□□ -1.38
HDAC3-206ENST00000471968 KAZNQ674X7 775 aa6.41□□□□□ -1.38
HDAC3-206ENST00000471968 ARHGAP17Q68EM7 881 aa6.41□□□□□ -1.38
HDAC3-206ENST00000471968 TMEM26Q6ZUK4 368 aa6.41□□□□□ -1.38
HDAC3-206ENST00000471968 TFAP2DQ7Z6R9 452 aa6.41□□□□□ -1.38
HDAC3-206ENST00000471968 CD163Q86VB7 1156 aa6.41□□□□□ -1.38
HDAC3-206ENST00000471968 TMTC1Q8IUR5 882 aa6.41□□□□□ -1.38
HDAC3-206ENST00000471968 CHERPQ8IWX8 916 aaKnown RBP6.41□□□□□ -1.38
HDAC3-206ENST00000471968 SCML4Q8N228 414 aa6.41□□□□□ -1.38
HDAC3-206ENST00000471968 GHDCQ8N2G8 530 aa6.41□□□□□ -1.38
HDAC3-206ENST00000471968 RPRMLQ8N4K4 120 aa6.41□□□□□ -1.38
HDAC3-206ENST00000471968 OR8K5Q8NH50 307 aa6.41□□□□□ -1.38
HDAC3-206ENST00000471968 IRGQQ8WZA9 623 aa6.41□□□□□ -1.38
HDAC3-206ENST00000471968 HAS2Q92819 552 aa6.41□□□□□ -1.38
HDAC3-206ENST00000471968 PIGTQ969N2 578 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms