RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 SLC35F3Q8IY50 421 aa15.11■□□□□ 0.01
SDC3-203ENST00000471567 GPR156Q8NFN8 814 aa15.11■□□□□ 0.01
SDC3-203ENST00000471567 NAT6Q93015 286 aa15.11■□□□□ 0.01
SDC3-203ENST00000471567 CDKN2AIPNLQ96HQ2 116 aa15.11■□□□□ 0.01
SDC3-203ENST00000471567 TTC25Q96NG3 672 aa15.11■□□□□ 0.01
SDC3-203ENST00000471567 IL22Q9GZX6 179 aa15.11■□□□□ 0.01
SDC3-203ENST00000471567 ARFGAP3Q9NP61 516 aa15.11■□□□□ 0.01
SDC3-203ENST00000471567 BFARQ9NZS9 450 aa15.11■□□□□ 0.01
SDC3-203ENST00000471567 TAAR2Q9P1P5 351 aa15.11■□□□□ 0.01
SDC3-203ENST00000471567 SLC30A1Q9Y6M5 507 aa15.11■□□□□ 0.01
SDC3-203ENST00000471567 KMOO15229 486 aa15.1■□□□□ 0.01
SDC3-203ENST00000471567 MTX2O75431 263 aa15.1■□□□□ 0.01
SDC3-203ENST00000471567 MLNP12872 115 aa15.1■□□□□ 0.01
SDC3-203ENST00000471567 AK4P27144 223 aaPredicted RBP15.1■□□□□ 0.01
SDC3-203ENST00000471567 MC4RP32245 332 aa15.1■□□□□ 0.01
SDC3-203ENST00000471567 ACTR1BP42025 376 aa15.1■□□□□ 0.01
SDC3-203ENST00000471567 CLCNKAP51800 687 aa15.1■□□□□ 0.01
SDC3-203ENST00000471567 ACTR1AP61163 376 aa15.1■□□□□ 0.01
SDC3-203ENST00000471567 PTK6Q13882 451 aa15.1■□□□□ 0.01
SDC3-203ENST00000471567 KHDC1Q4VXA5 237 aaKnown RBP15.1■□□□□ 0.01
SDC3-203ENST00000471567 CCDC38Q502W7 563 aa15.1■□□□□ 0.01
SDC3-203ENST00000471567 TSTD2Q5T7W7 516 aa15.1■□□□□ 0.01
SDC3-203ENST00000471567 LRRTM4Q86VH4 590 aa15.1■□□□□ 0.01
SDC3-203ENST00000471567 PNPLA1Q8N8W4 532 aa15.1■□□□□ 0.01
SDC3-203ENST00000471567 MCUQ8NE86 351 aa15.1■□□□□ 0.01
SDC3-203ENST00000471567 PPHLN1Q8NEY8 458 aaKnown RBP15.1■□□□□ 0.01
SDC3-203ENST00000471567 OR6C4Q8NGE1 309 aa15.1■□□□□ 0.01
SDC3-203ENST00000471567 HEXDCQ8WVB3 486 aa15.1■□□□□ 0.01
SDC3-203ENST00000471567 CPT1BQ92523 772 aa15.1■□□□□ 0.01
SDC3-203ENST00000471567 TRIM44Q96DX7 344 aaPredicted RBP15.1■□□□□ 0.01
SDC3-203ENST00000471567 DPEP2Q9H4A9 486 aa15.1■□□□□ 0.01
SDC3-203ENST00000471567 SPATS2LQ9NUQ6 558 aaKnown RBP15.1■□□□□ 0.01
SDC3-203ENST00000471567 GULP1Q9UBP9 304 aa15.1■□□□□ 0.01
SDC3-203ENST00000471567 CRLS1Q9UJA2 301 aa15.1■□□□□ 0.01
SDC3-203ENST00000471567 PADI4Q9UM07 663 aa15.1■□□□□ 0.01
SDC3-203ENST00000471567 TCAF1Q9Y4C2 921 aa15.1■□□□□ 0.01
SDC3-203ENST00000471567 PLEKHM1Q9Y4G2 1056 aa15.1■□□□□ 0.01
SDC3-203ENST00000471567 PCYT1BQ9Y5K3 369 aaPredicted RBP15.1■□□□□ 0.01
SDC3-203ENST00000471567 ST14Q9Y5Y6 855 aa15.1■□□□□ 0.01
SDC3-203ENST00000471567 ZNF106Q9H2Y7 1883 aaKnown RBP15.1■□□□□ 0.01
SDC3-203ENST00000471567 TRBV5-4A0A0C4DH59 114 aa15.09■□□□□ 0.01
SDC3-203ENST00000471567 TCRBV7S3A2A0A539 114 aa15.09■□□□□ 0.01
SDC3-203ENST00000471567 GPR39O43194 453 aa15.09■□□□□ 0.01
SDC3-203ENST00000471567 NOBOXO60393 691 aa15.09■□□□□ 0.01
SDC3-203ENST00000471567 KCNJ13O60928 360 aa15.09■□□□□ 0.01
SDC3-203ENST00000471567 TUBB4AP04350 444 aa15.09■□□□□ 0.01
SDC3-203ENST00000471567 MSH3P20585 1137 aa15.09■□□□□ 0.01
SDC3-203ENST00000471567 CA5AP35218 305 aa15.09■□□□□ 0.01
SDC3-203ENST00000471567 PTGIRP43119 386 aa15.09■□□□□ 0.01
SDC3-203ENST00000471567 SESN2P58004 480 aaPredicted RBP15.09■□□□□ 0.01
SDC3-203ENST00000471567 ACVR1Q04771 509 aa15.09■□□□□ 0.01
SDC3-203ENST00000471567 CACNG1Q06432 222 aa15.09■□□□□ 0.01
SDC3-203ENST00000471567 FOXC1Q12948 553 aa15.09■□□□□ 0.01
SDC3-203ENST00000471567 SLC30A9Q6PML9 568 aa15.09■□□□□ 0.01
SDC3-203ENST00000471567 ZNF534Q76KX8 674 aa15.09■□□□□ 0.01
SDC3-203ENST00000471567 CHST15Q7LFX5 561 aaPredicted RBP15.09■□□□□ 0.01
SDC3-203ENST00000471567 C17orf82Q86X59 251 aaPredicted RBP15.09■□□□□ 0.01
SDC3-203ENST00000471567 KLHL7Q8IXQ5 586 aa15.09■□□□□ 0.01
SDC3-203ENST00000471567 NXPE1Q8N323 547 aa15.09■□□□□ 0.01
SDC3-203ENST00000471567 KYQ8NBH2 561 aa15.09■□□□□ 0.01
SDC3-203ENST00000471567 ZDHHC1Q8WTX9 485 aa15.09■□□□□ 0.01
SDC3-203ENST00000471567 ZNF514Q96K75 400 aaPredicted RBP15.09■□□□□ 0.01
SDC3-203ENST00000471567 TIMM29Q9BSF4 260 aa15.09■□□□□ 0.01
SDC3-203ENST00000471567 XAB2Q9HCS7 855 aaKnown RBP15.09■□□□□ 0.01
SDC3-203ENST00000471567 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.09■□□□□ 0.01
SDC3-203ENST00000471567 SIRPGQ9P1W8 387 aa15.09■□□□□ 0.01
SDC3-203ENST00000471567 WASF3Q9UPY6 502 aa15.09■□□□□ 0.01
SDC3-203ENST00000471567 PRKAB1Q9Y478 270 aa15.09■□□□□ 0.01
SDC3-203ENST00000471567 DNMT3AQ9Y6K1 912 aaPredicted RBP15.09■□□□□ 0.01
SDC3-203ENST00000471567 CPED1A4D0V7 1026 aa15.08■□□□□ 0
SDC3-203ENST00000471567 B4DGG1 531 aa15.08■□□□□ 0
SDC3-203ENST00000471567 CCL22O00626 93 aa15.08■□□□□ 0
SDC3-203ENST00000471567 RALBP11234 206 aa15.08■□□□□ 0
SDC3-203ENST00000471567 MYF5P13349 255 aa15.08■□□□□ 0
SDC3-203ENST00000471567 ACP5P13686 325 aa15.08■□□□□ 0
SDC3-203ENST00000471567 ZNF7P17097 686 aaPredicted RBP15.08■□□□□ 0
SDC3-203ENST00000471567 ARSDP51689 593 aa15.08■□□□□ 0
SDC3-203ENST00000471567 SHC2P98077 582 aa15.08■□□□□ 0
SDC3-203ENST00000471567 DR1Q01658 176 aa15.08■□□□□ 0
SDC3-203ENST00000471567 KCTD19Q17RG1 926 aaPredicted RBP15.08■□□□□ 0
SDC3-203ENST00000471567 C14orf28Q4W4Y0 310 aa15.08■□□□□ 0
SDC3-203ENST00000471567 CCDC157Q569K6 752 aa15.08■□□□□ 0
SDC3-203ENST00000471567 ZRANB3Q5FWF4 1079 aa15.08■□□□□ 0
SDC3-203ENST00000471567 ANKRD22Q5VYY1 191 aa15.08■□□□□ 0
SDC3-203ENST00000471567 GUSBP11Q6P575 273 aa15.08■□□□□ 0
SDC3-203ENST00000471567 EFL1Q7Z2Z2 1120 aaKnown RBP15.08■□□□□ 0
SDC3-203ENST00000471567 PCGF5Q86SE9 256 aa15.08■□□□□ 0
SDC3-203ENST00000471567 ZNF547Q8IVP9 402 aa15.08■□□□□ 0
SDC3-203ENST00000471567 PPIL6Q8IXY8 311 aa15.08■□□□□ 0
SDC3-203ENST00000471567 GALNT15Q8N3T1 639 aa15.08■□□□□ 0
SDC3-203ENST00000471567 CHCHD4Q8N4Q1 142 aa15.08■□□□□ 0
SDC3-203ENST00000471567 RASGEF1AQ8N9B8 481 aa15.08■□□□□ 0
SDC3-203ENST00000471567 NAT8LQ8N9F0 302 aa15.08■□□□□ 0
SDC3-203ENST00000471567 OR13J1Q8NGT2 312 aa15.08■□□□□ 0
SDC3-203ENST00000471567 IFI44Q8TCB0 444 aa15.08■□□□□ 0
SDC3-203ENST00000471567 SGSM3Q96HU1 749 aa15.08■□□□□ 0
SDC3-203ENST00000471567 COPS8Q99627 209 aa15.08■□□□□ 0
SDC3-203ENST00000471567 MRM3Q9HC36 420 aaKnown RBP15.08■□□□□ 0
SDC3-203ENST00000471567 ZDHHC3Q9NYG2 299 aa15.08■□□□□ 0
SDC3-203ENST00000471567 ASIC3Q9UHC3 531 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms