RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 TRABDQ9H4I3 376 aa13.37□□□□□ -0.27
HMGN1-211ENST00000471260 SAR1BQ9Y6B6 198 aa13.37□□□□□ -0.27
HMGN1-211ENST00000471260 hCG_1818297A0A087WSY0 165 aa13.36□□□□□ -0.27
HMGN1-211ENST00000471260 PMS2P1A4D2B8 440 aa13.36□□□□□ -0.27
HMGN1-211ENST00000471260 OR5K4A6NMS3 321 aa13.36□□□□□ -0.27
HMGN1-211ENST00000471260 FADS2P1A8MWK0 482 aa13.36□□□□□ -0.27
HMGN1-211ENST00000471260 HACD1B0YJ81 288 aa13.36□□□□□ -0.27
HMGN1-211ENST00000471260 ERVH48-1M5A8F1 160 aa13.36□□□□□ -0.27
HMGN1-211ENST00000471260 NUAK1O60285 661 aa13.36□□□□□ -0.27
HMGN1-211ENST00000471260 ATP1A1P05023 1023 aaKnown RBP13.36□□□□□ -0.27
HMGN1-211ENST00000471260 CD82P27701 267 aa13.36□□□□□ -0.27
HMGN1-211ENST00000471260 CD1CP29017 333 aa13.36□□□□□ -0.27
HMGN1-211ENST00000471260 TNNT3P45378 269 aaPredicted RBP13.36□□□□□ -0.27
HMGN1-211ENST00000471260 CLCNKAP51800 687 aa13.36□□□□□ -0.27
HMGN1-211ENST00000471260 COPS2P61201 443 aa13.36□□□□□ -0.27
HMGN1-211ENST00000471260 KIF5AQ12840 1032 aa13.36□□□□□ -0.27
HMGN1-211ENST00000471260 CLN3Q13286 438 aa13.36□□□□□ -0.27
HMGN1-211ENST00000471260 PPP2R5EQ16537 467 aa13.36□□□□□ -0.27
HMGN1-211ENST00000471260 PCSK7Q16549 785 aa13.36□□□□□ -0.27
HMGN1-211ENST00000471260 AMZ1Q400G9 498 aa13.36□□□□□ -0.27
HMGN1-211ENST00000471260 BEND6Q5SZJ8 279 aaPredicted RBP13.36□□□□□ -0.27
HMGN1-211ENST00000471260 PHF19Q5T6S3 580 aa13.36□□□□□ -0.27
HMGN1-211ENST00000471260 KAZNQ674X7 775 aa13.36□□□□□ -0.27
HMGN1-211ENST00000471260 CHST15Q7LFX5 561 aaPredicted RBP13.36□□□□□ -0.27
HMGN1-211ENST00000471260 TMPRSS9Q7Z410 1059 aa13.36□□□□□ -0.27
HMGN1-211ENST00000471260 DTX3LQ8TDB6 740 aa13.36□□□□□ -0.27
HMGN1-211ENST00000471260 PATE1Q8WXA2 126 aa13.36□□□□□ -0.27
HMGN1-211ENST00000471260 SH3KBP1Q96B97 665 aa13.36□□□□□ -0.27
HMGN1-211ENST00000471260 PLEKHG4BQ96PX9 1271 aa13.36□□□□□ -0.27
HMGN1-211ENST00000471260 ALS2CR12Q96Q35 445 aa13.36□□□□□ -0.27
HMGN1-211ENST00000471260 HERPUD2Q9BSE4 406 aa13.36□□□□□ -0.27
HMGN1-211ENST00000471260 SPATA16Q9BXB7 569 aa13.36□□□□□ -0.27
HMGN1-211ENST00000471260 CEP41Q9BYV8 373 aa13.36□□□□□ -0.27
HMGN1-211ENST00000471260 GPR63Q9BZJ6 419 aa13.36□□□□□ -0.27
HMGN1-211ENST00000471260 SEMA6CQ9H3T2 930 aa13.36□□□□□ -0.27
HMGN1-211ENST00000471260 STN1Q9H668 368 aaKnown RBP13.36□□□□□ -0.27
HMGN1-211ENST00000471260 TRIM39Q9HCM9 518 aa13.36□□□□□ -0.27
HMGN1-211ENST00000471260 SARS2Q9NP81 518 aaKnown RBP13.36□□□□□ -0.27
HMGN1-211ENST00000471260 MED4Q9NPJ6 270 aa13.36□□□□□ -0.27
HMGN1-211ENST00000471260 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.36□□□□□ -0.27
HMGN1-211ENST00000471260 PISDQ9UG56 409 aa13.36□□□□□ -0.27
HMGN1-211ENST00000471260 FAM153AQ9UHL3 310 aa13.36□□□□□ -0.27
HMGN1-211ENST00000471260 EFR3BQ9Y2G0 817 aa13.36□□□□□ -0.27
HMGN1-211ENST00000471260 ZNF711Q9Y462 761 aa13.36□□□□□ -0.27
HMGN1-211ENST00000471260 PLEKHM1Q9Y4G2 1056 aa13.36□□□□□ -0.27
HMGN1-211ENST00000471260 OAS3Q9Y6K5 1087 aaKnown RBP13.36□□□□□ -0.27
HMGN1-211ENST00000471260 LOC400499M0QZD8 3231 aa13.36□□□□□ -0.27
HMGN1-211ENST00000471260 ATRXP46100 2492 aa13.35□□□□□ -0.27
HMGN1-211ENST00000471260 NBEAQ8NFP9 2946 aa13.35□□□□□ -0.27
HMGN1-211ENST00000471260 IGHV1OR21-1A0A087WYE8 117 aa13.35□□□□□ -0.27
HMGN1-211ENST00000471260 KIR2DS5A0A0G2JLQ3 304 aa13.35□□□□□ -0.27
HMGN1-211ENST00000471260 A0A0G2JNG1 304 aa13.35□□□□□ -0.27
HMGN1-211ENST00000471260 LOC285095A0A1B0GVY8 99 aa13.35□□□□□ -0.27
HMGN1-211ENST00000471260 K7ENP7 123 aa13.35□□□□□ -0.27
HMGN1-211ENST00000471260 KIR2DS3K7RE56 304 aa13.35□□□□□ -0.27
HMGN1-211ENST00000471260 PJA2O43164 708 aa13.35□□□□□ -0.27
HMGN1-211ENST00000471260 GRID2O43424 1007 aa13.35□□□□□ -0.27
HMGN1-211ENST00000471260 SLC25A14O95258 325 aaPredicted RBP13.35□□□□□ -0.27
HMGN1-211ENST00000471260 MT-CYBP00156 380 aaPredicted RBP13.35□□□□□ -0.27
HMGN1-211ENST00000471260 OAS2P29728 719 aaKnown RBP13.35□□□□□ -0.27
HMGN1-211ENST00000471260 HMGCLP35914 325 aa13.35□□□□□ -0.27
HMGN1-211ENST00000471260 LIMK2P53671 638 aa13.35□□□□□ -0.27
HMGN1-211ENST00000471260 WASHC5Q12768 1159 aa13.35□□□□□ -0.27
HMGN1-211ENST00000471260 XRCC4Q13426 336 aa13.35□□□□□ -0.27
HMGN1-211ENST00000471260 KIR2DS5Q14953 304 aa13.35□□□□□ -0.27
HMGN1-211ENST00000471260 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.35□□□□□ -0.27
HMGN1-211ENST00000471260 TMEM164Q5U3C3 297 aa13.35□□□□□ -0.27
HMGN1-211ENST00000471260 ZDHHC20Q5W0Z9 365 aa13.35□□□□□ -0.27
HMGN1-211ENST00000471260 TMEM71Q6P5X7 295 aa13.35□□□□□ -0.27
HMGN1-211ENST00000471260 INO80CQ6PI98 192 aaPredicted RBP13.35□□□□□ -0.27
HMGN1-211ENST00000471260 BBS12Q6ZW61 710 aa13.35□□□□□ -0.27
HMGN1-211ENST00000471260 USP53Q70EK8 1073 aa13.35□□□□□ -0.27
HMGN1-211ENST00000471260 KDELC2Q7Z4H8 507 aa13.35□□□□□ -0.27
HMGN1-211ENST00000471260 DAAM2Q86T65 1068 aa13.35□□□□□ -0.27
HMGN1-211ENST00000471260 SLC9B2Q86UD5 537 aa13.35□□□□□ -0.27
HMGN1-211ENST00000471260 JAMLQ86YT9 394 aa13.35□□□□□ -0.27
HMGN1-211ENST00000471260 GPR26Q8NDV2 337 aa13.35□□□□□ -0.27
HMGN1-211ENST00000471260 SPATA22Q8NHS9 363 aa13.35□□□□□ -0.27
HMGN1-211ENST00000471260 SLC37A2Q8TED4 501 aa13.35□□□□□ -0.27
HMGN1-211ENST00000471260 SLC39A7Q92504 469 aa13.35□□□□□ -0.27
HMGN1-211ENST00000471260 GLYATL1Q969I3 302 aa13.35□□□□□ -0.27
HMGN1-211ENST00000471260 FCRL5Q96RD9 977 aa13.35□□□□□ -0.27
HMGN1-211ENST00000471260 CCNL2Q96S94 520 aaPredicted RBP13.35□□□□□ -0.27
HMGN1-211ENST00000471260 SLC38A3Q99624 504 aa13.35□□□□□ -0.27
HMGN1-211ENST00000471260 FERMT1Q9BQL6 677 aa13.35□□□□□ -0.27
HMGN1-211ENST00000471260 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.35□□□□□ -0.27
HMGN1-211ENST00000471260 RDH14Q9HBH5 336 aa13.35□□□□□ -0.27
HMGN1-211ENST00000471260 KCNK4Q9NYG8 393 aa13.35□□□□□ -0.27
HMGN1-211ENST00000471260 HACD3Q9P035 362 aa13.35□□□□□ -0.27
HMGN1-211ENST00000471260 SAE1Q9UBE0 346 aaPredicted RBP13.35□□□□□ -0.27
HMGN1-211ENST00000471260 TRHDEQ9UKU6 1024 aa13.35□□□□□ -0.27
HMGN1-211ENST00000471260 GUCA1BQ9UMX6 200 aa13.35□□□□□ -0.27
HMGN1-211ENST00000471260 SHOC2Q9UQ13 582 aa13.35□□□□□ -0.27
HMGN1-211ENST00000471260 JRKLQ9Y4A0 524 aa13.35□□□□□ -0.27
HMGN1-211ENST00000471260 BPTFQ12830 3046 aa13.35□□□□□ -0.27
HMGN1-211ENST00000471260 ZFC3H1O60293 1989 aaKnown RBP13.34□□□□□ -0.27
HMGN1-211ENST00000471260 IGHV5-10-1A0A0J9YXX1 117 aa13.34□□□□□ -0.27
HMGN1-211ENST00000471260 BTNL10A8MVZ5 291 aa13.34□□□□□ -0.27
HMGN1-211ENST00000471260 APOC4-APOC2K7ER74 178 aa13.34□□□□□ -0.27
HMGN1-211ENST00000471260 CHUKO15111 745 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms