RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 MDGA1Q8NFP4 955 aa13.54□□□□□ -0.24
BRCA1-209ENST00000470026 OR2T11Q8NH01 316 aa13.54□□□□□ -0.24
BRCA1-209ENST00000470026 GFM2Q969S9 779 aaKnown RBP13.54□□□□□ -0.24
BRCA1-209ENST00000470026 GPR21Q99679 349 aa13.54□□□□□ -0.24
BRCA1-209ENST00000470026 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.54□□□□□ -0.24
BRCA1-209ENST00000470026 SEPT3Q9UH03 358 aa13.54□□□□□ -0.24
BRCA1-209ENST00000470026 ZFC3H1O60293 1989 aaKnown RBP13.54□□□□□ -0.24
BRCA1-209ENST00000470026 A0A0D9SEW6 157 aa13.54□□□□□ -0.24
BRCA1-209ENST00000470026 UBA6A0AVT1 1052 aaPredicted RBP13.54□□□□□ -0.24
BRCA1-209ENST00000470026 FAM234BA2RU67 622 aa13.54□□□□□ -0.24
BRCA1-209ENST00000470026 OR6C75A6NL08 312 aa13.54□□□□□ -0.24
BRCA1-209ENST00000470026 H3BNC9 293 aa13.54□□□□□ -0.24
BRCA1-209ENST00000470026 SLC22A3O75751 556 aa13.54□□□□□ -0.24
BRCA1-209ENST00000470026 PYGLP06737 847 aa13.54□□□□□ -0.24
BRCA1-209ENST00000470026 ASGR1P07306 291 aa13.54□□□□□ -0.24
BRCA1-209ENST00000470026 RGRP47804 291 aa13.54□□□□□ -0.24
BRCA1-209ENST00000470026 CLCN4P51793 760 aa13.54□□□□□ -0.24
BRCA1-209ENST00000470026 KPNA1P52294 538 aaPredicted RBP13.54□□□□□ -0.24
BRCA1-209ENST00000470026 HK3P52790 923 aa13.54□□□□□ -0.24
BRCA1-209ENST00000470026 UFM1P61960 85 aa13.54□□□□□ -0.24
BRCA1-209ENST00000470026 CYP51A1Q16850 503 aa13.54□□□□□ -0.24
BRCA1-209ENST00000470026 TTC33Q6PID6 262 aaPredicted RBP13.54□□□□□ -0.24
BRCA1-209ENST00000470026 BBS5Q8N3I7 341 aa13.54□□□□□ -0.24
BRCA1-209ENST00000470026 DPP10Q8N608 796 aa13.54□□□□□ -0.24
BRCA1-209ENST00000470026 OR4K2Q8NGD2 314 aa13.54□□□□□ -0.24
BRCA1-209ENST00000470026 GPR152Q8TDT2 470 aa13.54□□□□□ -0.24
BRCA1-209ENST00000470026 LZICQ8WZA0 190 aa13.54□□□□□ -0.24
BRCA1-209ENST00000470026 SLC30A3Q99726 388 aa13.54□□□□□ -0.24
BRCA1-209ENST00000470026 KCTD14Q9BQ13 255 aaPredicted RBP13.54□□□□□ -0.24
BRCA1-209ENST00000470026 YTHDF1Q9BYJ9 559 aaKnown RBP13.54□□□□□ -0.24
BRCA1-209ENST00000470026 GALPQ9UBC7 116 aa13.54□□□□□ -0.24
BRCA1-209ENST00000470026 ANAPC2Q9UJX6 822 aa13.54□□□□□ -0.24
BRCA1-209ENST00000470026 CDH7Q9ULB5 785 aa13.54□□□□□ -0.24
BRCA1-209ENST00000470026 FAM50BQ9Y247 325 aa13.54□□□□□ -0.24
BRCA1-209ENST00000470026 VPS9D1Q9Y2B5 631 aa13.54□□□□□ -0.24
BRCA1-209ENST00000470026 GMEB1Q9Y692 573 aa13.54□□□□□ -0.24
BRCA1-209ENST00000470026 NPEPPSL1A6NEC2 478 aa13.53□□□□□ -0.24
BRCA1-209ENST00000470026 E2F3O00716 465 aa13.53□□□□□ -0.24
BRCA1-209ENST00000470026 SEPT4O43236 478 aa13.53□□□□□ -0.24
BRCA1-209ENST00000470026 NDUFS3O75489 264 aa13.53□□□□□ -0.24
BRCA1-209ENST00000470026 C1RP00736 705 aa13.53□□□□□ -0.24
BRCA1-209ENST00000470026 HMBSP08397 361 aa13.53□□□□□ -0.24
BRCA1-209ENST00000470026 ENO2P09104 434 aaPredicted RBP13.53□□□□□ -0.24
BRCA1-209ENST00000470026 IL12AP29459 219 aa13.53□□□□□ -0.24
BRCA1-209ENST00000470026 CAPGP40121 348 aa13.53□□□□□ -0.24
BRCA1-209ENST00000470026 AGTR2P50052 363 aa13.53□□□□□ -0.24
BRCA1-209ENST00000470026 POLR2JP52435 117 aaKnown RBP13.53□□□□□ -0.24
BRCA1-209ENST00000470026 CTBSQ01459 385 aa13.53□□□□□ -0.24
BRCA1-209ENST00000470026 GNA12Q03113 381 aa13.53□□□□□ -0.24
BRCA1-209ENST00000470026 AASDHQ4L235 1098 aaPredicted RBP13.53□□□□□ -0.24
BRCA1-209ENST00000470026 CYBRD1Q53TN4 286 aa13.53□□□□□ -0.24
BRCA1-209ENST00000470026 UGT3A1Q6NUS8 523 aa13.53□□□□□ -0.24
BRCA1-209ENST00000470026 GPR141Q7Z602 305 aa13.53□□□□□ -0.24
BRCA1-209ENST00000470026 PATL1Q86TB9 770 aaKnown RBP13.53□□□□□ -0.24
BRCA1-209ENST00000470026 PROSER1Q86XN7 944 aa13.53□□□□□ -0.24
BRCA1-209ENST00000470026 RASAL3Q86YV0 1011 aa13.53□□□□□ -0.24
BRCA1-209ENST00000470026 DNAJB14Q8TBM8 379 aa13.53□□□□□ -0.24
BRCA1-209ENST00000470026 LINC01599Q8WXQ3 324 aa13.53□□□□□ -0.24
BRCA1-209ENST00000470026 TRIB2Q92519 343 aa13.53□□□□□ -0.24
BRCA1-209ENST00000470026 VPS33AQ96AX1 596 aa13.53□□□□□ -0.24
BRCA1-209ENST00000470026 PLEKHG4BQ96PX9 1271 aa13.53□□□□□ -0.24
BRCA1-209ENST00000470026 ZNF382Q96SR6 550 aa13.53□□□□□ -0.24
BRCA1-209ENST00000470026 DOK1Q99704 481 aa13.53□□□□□ -0.24
BRCA1-209ENST00000470026 TDRD1Q9BXT4 1180 aaKnown RBP13.53□□□□□ -0.24
BRCA1-209ENST00000470026 SEZ6LQ9BYH1 1024 aa13.53□□□□□ -0.24
BRCA1-209ENST00000470026 CCDC68Q9H2F9 335 aa13.53□□□□□ -0.24
BRCA1-209ENST00000470026 PFDN4Q9NQP4 134 aa13.53□□□□□ -0.24
BRCA1-209ENST00000470026 RNF103-CHMP3A0A140T963 221 aa13.52□□□□□ -0.24
BRCA1-209ENST00000470026 TRIM64BA6NI03 449 aa13.52□□□□□ -0.24
BRCA1-209ENST00000470026 CCDC154A6NI56 674 aa13.52□□□□□ -0.24
BRCA1-209ENST00000470026 F5H5T6 163 aa13.52□□□□□ -0.24
BRCA1-209ENST00000470026 EI24O14681 340 aa13.52□□□□□ -0.24
BRCA1-209ENST00000470026 INPP4BO15327 924 aa13.52□□□□□ -0.24
BRCA1-209ENST00000470026 INSIG1O15503 277 aa13.52□□□□□ -0.24
BRCA1-209ENST00000470026 SNAP91O60641 907 aa13.52□□□□□ -0.24
BRCA1-209ENST00000470026 SNX2O60749 519 aa13.52□□□□□ -0.24
BRCA1-209ENST00000470026 CRCPO75575 148 aa13.52□□□□□ -0.24
BRCA1-209ENST00000470026 VNN2O95498 520 aa13.52□□□□□ -0.24
BRCA1-209ENST00000470026 CHEK2O96017 543 aa13.52□□□□□ -0.24
BRCA1-209ENST00000470026 MTHFD1P11586 935 aaKnown RBP13.52□□□□□ -0.24
BRCA1-209ENST00000470026 PKMP14618 531 aaKnown RBP13.52□□□□□ -0.24
BRCA1-209ENST00000470026 HRH2P25021 359 aa13.52□□□□□ -0.24
BRCA1-209ENST00000470026 RPL10P27635 214 aaKnown RBP13.52□□□□□ -0.24
BRCA1-209ENST00000470026 ADARP55265 1226 aaKnown RBP13.52□□□□□ -0.24
BRCA1-209ENST00000470026 ADARB1P78563 741 aaKnown RBP13.52□□□□□ -0.24
BRCA1-209ENST00000470026 PTPRNQ16849 979 aa13.52□□□□□ -0.24
BRCA1-209ENST00000470026 CTXN3Q4LDR2 81 aa13.52□□□□□ -0.24
BRCA1-209ENST00000470026 CTSL3PQ5NE16 218 aa13.52□□□□□ -0.24
BRCA1-209ENST00000470026 C6orf136Q5SQH8 315 aa13.52□□□□□ -0.24
BRCA1-209ENST00000470026 CST9Q5W186 159 aa13.52□□□□□ -0.24
BRCA1-209ENST00000470026 NANOGP8Q6NSW7 305 aa13.52□□□□□ -0.24
BRCA1-209ENST00000470026 SLC24A5Q71RS6 500 aa13.52□□□□□ -0.24
BRCA1-209ENST00000470026 GLT6D1Q7Z4J2 308 aa13.52□□□□□ -0.24
BRCA1-209ENST00000470026 GPR180Q86V85 440 aa13.52□□□□□ -0.24
BRCA1-209ENST00000470026 ZFAND4Q86XD8 727 aa13.52□□□□□ -0.24
BRCA1-209ENST00000470026 LGI2Q8N0V4 545 aa13.52□□□□□ -0.24
BRCA1-209ENST00000470026 ZNF786Q8N393 782 aa13.52□□□□□ -0.24
BRCA1-209ENST00000470026 OR56A4Q8NGH8 313 aa13.52□□□□□ -0.24
BRCA1-209ENST00000470026 PROKR1Q8TCW9 393 aa13.52□□□□□ -0.24
BRCA1-209ENST00000470026 CD200R1Q8TD46 325 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms