RNA–Protein interactions for RNA: ENST00000469802.5

COL9A3-208, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-208ENST00000469802 UBE2IP63279 158 aaKnown RBP16.1■□□□□ 0.17
COL9A3-208ENST00000469802 KIR2DS5Q14953 304 aa16.1■□□□□ 0.17
COL9A3-208ENST00000469802 LLGL1Q15334 1064 aa16.1■□□□□ 0.17
COL9A3-208ENST00000469802 PPP2R5EQ16537 467 aa16.1■□□□□ 0.17
COL9A3-208ENST00000469802 KHDC1Q4VXA5 237 aaKnown RBP16.1■□□□□ 0.17
COL9A3-208ENST00000469802 ZNF648Q5T619 568 aaPredicted RBP16.1■□□□□ 0.17
COL9A3-208ENST00000469802 TMEM164Q5U3C3 297 aa16.1■□□□□ 0.17
COL9A3-208ENST00000469802 KAZNQ674X7 775 aa16.1■□□□□ 0.17
COL9A3-208ENST00000469802 WDR74Q6RFH5 385 aaPredicted RBP16.1■□□□□ 0.17
COL9A3-208ENST00000469802 CCDC170Q8IYT3 715 aa16.1■□□□□ 0.17
COL9A3-208ENST00000469802 TTC30BQ8N4P2 665 aa16.1■□□□□ 0.17
COL9A3-208ENST00000469802 BMPERQ8N8U9 685 aa16.1■□□□□ 0.17
COL9A3-208ENST00000469802 OR10G6Q8NH81 332 aa16.1■□□□□ 0.17
COL9A3-208ENST00000469802 OXNAD1Q96HP4 312 aaPredicted RBP16.1■□□□□ 0.17
COL9A3-208ENST00000469802 VPS35Q96QK1 796 aa16.1■□□□□ 0.17
COL9A3-208ENST00000469802 DDA1Q9BW61 102 aa16.1■□□□□ 0.17
COL9A3-208ENST00000469802 TRIM5Q9C035 493 aa16.1■□□□□ 0.17
COL9A3-208ENST00000469802 SEMA4CQ9C0C4 833 aa16.1■□□□□ 0.17
COL9A3-208ENST00000469802 UBP1Q9NZI7 540 aa16.1■□□□□ 0.17
COL9A3-208ENST00000469802 FAM153AQ9UHL3 310 aa16.1■□□□□ 0.17
COL9A3-208ENST00000469802 TMPRSS11EQ9UL52 423 aa16.1■□□□□ 0.17
COL9A3-208ENST00000469802 PCDHA13Q9Y5I0 950 aa16.1■□□□□ 0.17
COL9A3-208ENST00000469802 OR5K4A6NMS3 321 aa16.09■□□□□ 0.17
COL9A3-208ENST00000469802 B4E171 279 aa16.09■□□□□ 0.17
COL9A3-208ENST00000469802 ZRANB2O95218 330 aaKnown RBP eCLIP16.09■□□□□ 0.17
COL9A3-208ENST00000469802 MPSTP25325 297 aa16.09■□□□□ 0.17
COL9A3-208ENST00000469802 HMGCLP35914 325 aa16.09■□□□□ 0.17
COL9A3-208ENST00000469802 TSPAN7P41732 249 aa16.09■□□□□ 0.17
COL9A3-208ENST00000469802 WNT3AP56704 352 aa16.09■□□□□ 0.17
COL9A3-208ENST00000469802 NOMO1Q15155 1222 aa16.09■□□□□ 0.17
COL9A3-208ENST00000469802 ARHGAP22Q7Z5H3 698 aa16.09■□□□□ 0.17
COL9A3-208ENST00000469802 SLC9B2Q86UD5 537 aa16.09■□□□□ 0.17
COL9A3-208ENST00000469802 ZC3H18Q86VM9 953 aaKnown RBP16.09■□□□□ 0.17
COL9A3-208ENST00000469802 ZNF547Q8IVP9 402 aa16.09■□□□□ 0.17
COL9A3-208ENST00000469802 RCOR2Q8IZ40 523 aa16.09■□□□□ 0.17
COL9A3-208ENST00000469802 ZNF567Q8N184 647 aa16.09■□□□□ 0.17
COL9A3-208ENST00000469802 AVL9Q8NBF6 648 aa16.09■□□□□ 0.17
COL9A3-208ENST00000469802 DTX3LQ8TDB6 740 aa16.09■□□□□ 0.17
COL9A3-208ENST00000469802 KRT35Q92764 455 aa16.09■□□□□ 0.17
COL9A3-208ENST00000469802 P3H4Q92791 437 aa16.09■□□□□ 0.17
COL9A3-208ENST00000469802 SH3KBP1Q96B97 665 aa16.09■□□□□ 0.17
COL9A3-208ENST00000469802 SGF29Q96ES7 293 aa16.09■□□□□ 0.17
COL9A3-208ENST00000469802 RBM41Q96IZ5 413 aaKnown RBP16.09■□□□□ 0.17
COL9A3-208ENST00000469802 MRGPRX2Q96LB1 330 aa16.09■□□□□ 0.17
COL9A3-208ENST00000469802 FCRL5Q96RD9 977 aa16.09■□□□□ 0.17
COL9A3-208ENST00000469802 TAAR9Q96RI9 348 aa16.09■□□□□ 0.17
COL9A3-208ENST00000469802 VAT1Q99536 393 aa16.09■□□□□ 0.17
COL9A3-208ENST00000469802 STN1Q9H668 368 aaKnown RBP16.09■□□□□ 0.17
COL9A3-208ENST00000469802 CPNE7Q9UBL6 633 aa16.09■□□□□ 0.17
COL9A3-208ENST00000469802 LILRA5A6NI73 299 aa16.08■□□□□ 0.16
COL9A3-208ENST00000469802 HACD1B0YJ81 288 aa16.08■□□□□ 0.16
COL9A3-208ENST00000469802 STMND1H3BQB6 276 aa16.08■□□□□ 0.16
COL9A3-208ENST00000469802 VEGFDO43915 354 aa16.08■□□□□ 0.16
COL9A3-208ENST00000469802 WT1P19544 449 aaPredicted RBP16.08■□□□□ 0.16
COL9A3-208ENST00000469802 CSTF2P33240 577 aaKnown RBP eCLIP16.08■□□□□ 0.16
COL9A3-208ENST00000469802 NFATC2Q13469 925 aa16.08■□□□□ 0.16
COL9A3-208ENST00000469802 LY6DQ14210 128 aa16.08■□□□□ 0.16
COL9A3-208ENST00000469802 SIRPB2Q5JXA9 342 aa16.08■□□□□ 0.16
COL9A3-208ENST00000469802 CCDC70Q6NSX1 233 aa16.08■□□□□ 0.16
COL9A3-208ENST00000469802 CRTC3Q6UUV7 619 aa16.08■□□□□ 0.16
COL9A3-208ENST00000469802 BBS12Q6ZW61 710 aa16.08■□□□□ 0.16
COL9A3-208ENST00000469802 VASH2Q86V25 355 aa16.08■□□□□ 0.16
COL9A3-208ENST00000469802 LRRTM4Q86VH4 590 aa16.08■□□□□ 0.16
COL9A3-208ENST00000469802 CCDC112Q8NEF3 446 aa16.08■□□□□ 0.16
COL9A3-208ENST00000469802 HTR3CQ8WXA8 447 aa16.08■□□□□ 0.16
COL9A3-208ENST00000469802 ART4Q93070 314 aa16.08■□□□□ 0.16
COL9A3-208ENST00000469802 HAUS1Q96CS2 278 aa16.08■□□□□ 0.16
COL9A3-208ENST00000469802 AHCYL2Q96HN2 611 aaKnown RBP16.08■□□□□ 0.16
COL9A3-208ENST00000469802 TIMM29Q9BSF4 260 aa16.08■□□□□ 0.16
COL9A3-208ENST00000469802 EPB41L1Q9H4G0 881 aa16.08■□□□□ 0.16
COL9A3-208ENST00000469802 TRABDQ9H4I3 376 aa16.08■□□□□ 0.16
COL9A3-208ENST00000469802 UCK1Q9HA47 277 aa16.08■□□□□ 0.16
COL9A3-208ENST00000469802 PRDM8Q9NQV8 689 aa16.08■□□□□ 0.16
COL9A3-208ENST00000469802 KLC4Q9NSK0 619 aa16.08■□□□□ 0.16
COL9A3-208ENST00000469802 OCIAD1Q9NX40 245 aa16.08■□□□□ 0.16
COL9A3-208ENST00000469802 SCHIP1Q9P0W5 487 aaPredicted RBP16.08■□□□□ 0.16
COL9A3-208ENST00000469802 KLHL8Q9P2G9 620 aaPredicted RBP16.08■□□□□ 0.16
COL9A3-208ENST00000469802 SLC23A2Q9UGH3 650 aa16.08■□□□□ 0.16
COL9A3-208ENST00000469802 PCDHGA4Q9Y5G9 962 aa16.08■□□□□ 0.16
COL9A3-208ENST00000469802 B3GALT1Q9Y5Z6 326 aa16.08■□□□□ 0.16
COL9A3-208ENST00000469802 MN1Q10571 1320 aaPredicted RBP16.08■□□□□ 0.16
COL9A3-208ENST00000469802 APOC4-APOC2K7ER74 178 aa16.07■□□□□ 0.16
COL9A3-208ENST00000469802 KMOO15229 486 aa16.07■□□□□ 0.16
COL9A3-208ENST00000469802 SNX2O60749 519 aa16.07■□□□□ 0.16
COL9A3-208ENST00000469802 MTX2O75431 263 aa16.07■□□□□ 0.16
COL9A3-208ENST00000469802 APOC2P02655 101 aa16.07■□□□□ 0.16
COL9A3-208ENST00000469802 ZNF7P17097 686 aaPredicted RBP16.07■□□□□ 0.16
COL9A3-208ENST00000469802 CHRNA4P43681 627 aa16.07■□□□□ 0.16
COL9A3-208ENST00000469802 XRCC4Q13426 336 aa16.07■□□□□ 0.16
COL9A3-208ENST00000469802 SPA17Q15506 151 aa16.07■□□□□ 0.16
COL9A3-208ENST00000469802 SLC1A5Q15758 541 aa16.07■□□□□ 0.16
COL9A3-208ENST00000469802 ATP13A5Q4VNC0 1218 aa16.07■□□□□ 0.16
COL9A3-208ENST00000469802 MANEAQ5SRI9 462 aa16.07■□□□□ 0.16
COL9A3-208ENST00000469802 C11orf96Q7Z7L8 435 aa16.07■□□□□ 0.16
COL9A3-208ENST00000469802 CCDC50Q8IVM0 306 aa16.07■□□□□ 0.16
COL9A3-208ENST00000469802 MED8Q96G25 268 aa16.07■□□□□ 0.16
COL9A3-208ENST00000469802 GORASP1Q9BQQ3 440 aa16.07■□□□□ 0.16
COL9A3-208ENST00000469802 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.07■□□□□ 0.16
COL9A3-208ENST00000469802 IL26Q9NPH9 171 aa16.07■□□□□ 0.16
COL9A3-208ENST00000469802 HACD3Q9P035 362 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms