RNA–Protein interactions for RNA: ENST00000469102.1

CMC1-208, Transcript of C-X9-C motif containing 1, human

TSL 1 (best)

Gene CMC1, Length 788 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CMC1-208	ENST00000469102	WDR38	Q5JTN6	314 aa		4.24	□□□□□ -1.73
CMC1-208	ENST00000469102	SLC35E4	Q6ICL7	350 aa		4.24	□□□□□ -1.73
CMC1-208	ENST00000469102	DGLUCY	Q7Z3D6	616 aa		4.24	□□□□□ -1.73
CMC1-208	ENST00000469102	PIWIL4	Q7Z3Z4	852 aa	Known RBP	4.24	□□□□□ -1.73
CMC1-208	ENST00000469102	SDCCAG8	Q86SQ7	713 aa	Predicted RBP	4.24	□□□□□ -1.73
CMC1-208	ENST00000469102	EXOC8	Q8IYI6	725 aa		4.24	□□□□□ -1.73
CMC1-208	ENST00000469102	RASGEF1C	Q8N431	466 aa		4.24	□□□□□ -1.73
CMC1-208	ENST00000469102	OR10V1	Q8NGI7	309 aa		4.24	□□□□□ -1.73
CMC1-208	ENST00000469102	HM13	Q8TCT9	377 aa		4.24	□□□□□ -1.73
CMC1-208	ENST00000469102	PHF21A	Q96BD5	680 aa		4.24	□□□□□ -1.73
CMC1-208	ENST00000469102	SMC6	Q96SB8	1091 aa		4.24	□□□□□ -1.73
CMC1-208	ENST00000469102	RAB6C	Q9H0N0	254 aa		4.24	□□□□□ -1.73
CMC1-208	ENST00000469102	TFB2M	Q9H5Q4	396 aa	Known RBP	4.24	□□□□□ -1.73
CMC1-208	ENST00000469102	MAGIX	Q9H6Y5	334 aa		4.24	□□□□□ -1.73
CMC1-208	ENST00000469102	STK39	Q9UEW8	545 aa		4.24	□□□□□ -1.73
CMC1-208	ENST00000469102	SNED1	Q8TER0	1413 aa		4.23	□□□□□ -1.73
CMC1-208	ENST00000469102	EIF4E1B	A6NMX2	242 aa	Known RBP	4.23	□□□□□ -1.73
CMC1-208	ENST00000469102	TMEM178B	H3BS89	294 aa		4.23	□□□□□ -1.73
CMC1-208	ENST00000469102	IPO7	O95373	1038 aa	Known RBP	4.23	□□□□□ -1.73
CMC1-208	ENST00000469102	CLEC3B	P05452	202 aa		4.23	□□□□□ -1.73
CMC1-208	ENST00000469102	TUBB	P07437	444 aa		4.23	□□□□□ -1.73
CMC1-208	ENST00000469102	PATE4	P0C8F1	98 aa		4.23	□□□□□ -1.73
CMC1-208	ENST00000469102	CSF2RA	P15509	400 aa		4.23	□□□□□ -1.73
CMC1-208	ENST00000469102	ZNF23	P17027	643 aa		4.23	□□□□□ -1.73
CMC1-208	ENST00000469102	BSG	P35613	385 aa		4.23	□□□□□ -1.73
CMC1-208	ENST00000469102	TUBB4B	P68371	445 aa		4.23	□□□□□ -1.73
CMC1-208	ENST00000469102	MRPS34	P82930	218 aa	Known RBP	4.23	□□□□□ -1.73
CMC1-208	ENST00000469102	ADIPOQ	Q15848	244 aa		4.23	□□□□□ -1.73
CMC1-208	ENST00000469102	C14orf177	Q52M58	125 aa		4.23	□□□□□ -1.73
CMC1-208	ENST00000469102	SLC27A1	Q6PCB7	646 aa		4.23	□□□□□ -1.73
CMC1-208	ENST00000469102	PLXDC2	Q6UX71	529 aa		4.23	□□□□□ -1.73
CMC1-208	ENST00000469102	CEACAM20	Q6UY09	585 aa		4.23	□□□□□ -1.73
CMC1-208	ENST00000469102	ANO5	Q75V66	913 aa		4.23	□□□□□ -1.73
CMC1-208	ENST00000469102	WDSUB1	Q8N9V3	476 aa		4.23	□□□□□ -1.73
CMC1-208	ENST00000469102	PCYOX1L	Q8NBM8	494 aa		4.23	□□□□□ -1.73
CMC1-208	ENST00000469102	SLC38A9	Q8NBW4	561 aa		4.23	□□□□□ -1.73
CMC1-208	ENST00000469102	ETNPPL	Q8TBG4	499 aa		4.23	□□□□□ -1.73
CMC1-208	ENST00000469102	UTP15	Q8TED0	518 aa	Known RBP	4.23	□□□□□ -1.73
CMC1-208	ENST00000469102	DNAAF4	Q8WXU2	420 aa		4.23	□□□□□ -1.73
CMC1-208	ENST00000469102	WBP2	Q969T9	261 aa		4.23	□□□□□ -1.73
CMC1-208	ENST00000469102	ZNF354B	Q96LW1	612 aa		4.23	□□□□□ -1.73
CMC1-208	ENST00000469102	C17orf77	Q96MU5	243 aa		4.23	□□□□□ -1.73
CMC1-208	ENST00000469102	SEPT5	Q99719	369 aa	Predicted RBP	4.23	□□□□□ -1.73
CMC1-208	ENST00000469102	RBM4	Q9BWF3	364 aa	Known RBP	4.23	□□□□□ -1.73
CMC1-208	ENST00000469102	UBA2	Q9UBT2	640 aa	Predicted RBP	4.23	□□□□□ -1.73
CMC1-208	ENST00000469102	KCNE2	Q9Y6J6	123 aa		4.23	□□□□□ -1.73
CMC1-208	ENST00000469102	FAM237B	A0A1B0GVD1	139 aa		4.22	□□□□□ -1.73
CMC1-208	ENST00000469102	HCRTR2	O43614	444 aa		4.22	□□□□□ -1.73
CMC1-208	ENST00000469102	SLC25A12	O75746	678 aa		4.22	□□□□□ -1.73
CMC1-208	ENST00000469102	PRCP	P42785	496 aa		4.22	□□□□□ -1.73
CMC1-208	ENST00000469102	TAS2R40	P59535	323 aa		4.22	□□□□□ -1.73
CMC1-208	ENST00000469102	RPS3A	P61247	264 aa	Known RBP	4.22	□□□□□ -1.73
CMC1-208	ENST00000469102	ZBED6	P86452	979 aa		4.22	□□□□□ -1.73
CMC1-208	ENST00000469102	G3BP1	Q13283	466 aa	Known RBP eCLIP	4.22	□□□□□ -1.73
CMC1-208	ENST00000469102	PLEKHM3	Q6ZWE6	761 aa		4.22	□□□□□ -1.73
CMC1-208	ENST00000469102	TSPAN33	Q86UF1	283 aa		4.22	□□□□□ -1.73
CMC1-208	ENST00000469102	ARHGAP12	Q8IWW6	846 aa		4.22	□□□□□ -1.73
CMC1-208	ENST00000469102	TRIM58	Q8NG06	486 aa		4.22	□□□□□ -1.73
CMC1-208	ENST00000469102	FCAMR	Q8WWV6	532 aa		4.22	□□□□□ -1.73
CMC1-208	ENST00000469102	LGALS12	Q96DT0	336 aa		4.22	□□□□□ -1.73
CMC1-208	ENST00000469102	PPM1M	Q96MI6	270 aa		4.22	□□□□□ -1.73
CMC1-208	ENST00000469102	SIL1	Q9H173	461 aa		4.22	□□□□□ -1.73
CMC1-208	ENST00000469102	UPF2	Q9HAU5	1272 aa	Known RBP	4.22	□□□□□ -1.73
CMC1-208	ENST00000469102	CWC15	Q9P013	229 aa	Known RBP	4.22	□□□□□ -1.73
CMC1-208	ENST00000469102	LIMA1	Q9UHB6	759 aa	Known RBP	4.22	□□□□□ -1.73
CMC1-208	ENST00000469102	SMCHD1	A6NHR9	2005 aa		4.22	□□□□□ -1.73
CMC1-208	ENST00000469102	KANSL1L	A0AUZ9	987 aa		4.21	□□□□□ -1.74
CMC1-208	ENST00000469102	PLPP2	O43688	288 aa		4.21	□□□□□ -1.74
CMC1-208	ENST00000469102	TMEM63A	O94886	807 aa		4.21	□□□□□ -1.74
CMC1-208	ENST00000469102	RTN3	O95197	1032 aa	Predicted RBP	4.21	□□□□□ -1.74
CMC1-208	ENST00000469102	LDLR	P01130	860 aa		4.21	□□□□□ -1.74
CMC1-208	ENST00000469102	INHBA	P08476	426 aa		4.21	□□□□□ -1.74
CMC1-208	ENST00000469102	KRTAP10-5	P60370	271 aa		4.21	□□□□□ -1.74
CMC1-208	ENST00000469102	NIPAL4	Q0D2K0	466 aa		4.21	□□□□□ -1.74
CMC1-208	ENST00000469102	ACVR2B	Q13705	512 aa		4.21	□□□□□ -1.74
CMC1-208	ENST00000469102	PDE1C	Q14123	709 aa	Predicted RBP	4.21	□□□□□ -1.74
CMC1-208	ENST00000469102	TECRL	Q5HYJ1	363 aa		4.21	□□□□□ -1.74
CMC1-208	ENST00000469102	ARHGAP11A	Q6P4F7	1023 aa		4.21	□□□□□ -1.74
CMC1-208	ENST00000469102	MMS22L	Q6ZRQ5	1243 aa		4.21	□□□□□ -1.74
CMC1-208	ENST00000469102	KRTAP7-1	Q8IUC3	87 aa		4.21	□□□□□ -1.74
CMC1-208	ENST00000469102	PM20D2	Q8IYS1	436 aa		4.21	□□□□□ -1.74
CMC1-208	ENST00000469102	RNF168	Q8IYW5	571 aa	Predicted RBP	4.21	□□□□□ -1.74
CMC1-208	ENST00000469102	FRMD1	Q8N878	549 aa		4.21	□□□□□ -1.74
CMC1-208	ENST00000469102	NAXE	Q8NCW5	288 aa		4.21	□□□□□ -1.74
CMC1-208	ENST00000469102	TAS1R2	Q8TE23	839 aa		4.21	□□□□□ -1.74
CMC1-208	ENST00000469102	GFRA4	Q9GZZ7	299 aa		4.21	□□□□□ -1.74
CMC1-208	ENST00000469102	PDCL3	Q9H2J4	239 aa		4.21	□□□□□ -1.74
CMC1-208	ENST00000469102	TRPC7	Q9HCX4	862 aa		4.21	□□□□□ -1.74
CMC1-208	ENST00000469102	MAP3K20	Q9NYL2	800 aa	Known RBP	4.21	□□□□□ -1.74
CMC1-208	ENST00000469102	ZNF624	Q9P2J8	865 aa	Predicted RBP	4.21	□□□□□ -1.74
CMC1-208	ENST00000469102	FBXW11	Q9UKB1	542 aa		4.21	□□□□□ -1.74
CMC1-208	ENST00000469102	R3HDM2	Q9Y2K5	976 aa	Known RBP	4.21	□□□□□ -1.74
CMC1-208	ENST00000469102	TMEM184B	Q9Y519	407 aa	Predicted RBP	4.21	□□□□□ -1.74
CMC1-208	ENST00000469102	PIAS3	Q9Y6X2	628 aa		4.21	□□□□□ -1.74
CMC1-208	ENST00000469102		A0A0G2JNG1	304 aa		4.2	□□□□□ -1.74
CMC1-208	ENST00000469102		A0A1W2PPI3	338 aa		4.2	□□□□□ -1.74
CMC1-208	ENST00000469102	SMIM1	B2RUZ4	78 aa		4.2	□□□□□ -1.74
CMC1-208	ENST00000469102	DAB1	O75553	588 aa		4.2	□□□□□ -1.74
CMC1-208	ENST00000469102	ERVK-10	P10266	1014 aa		4.2	□□□□□ -1.74
CMC1-208	ENST00000469102	SELL	P14151	372 aa		4.2	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms