RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 ABCG8Q9H221 673 aa18.79■□□□□ 0.6
SMC4-209ENST00000468653 LIMD1Q9UGP4 676 aa18.79■□□□□ 0.6
SMC4-209ENST00000468653 PRSS21Q9Y6M0 314 aa18.79■□□□□ 0.6
SMC4-209ENST00000468653 USH1CQ9Y6N9 552 aa18.79■□□□□ 0.6
SMC4-209ENST00000468653 TICRRQ7Z2Z1 1910 aa18.79■□□□□ 0.6
SMC4-209ENST00000468653 H0Y858 1186 aa18.78■□□□□ 0.6
SMC4-209ENST00000468653 PSMD11O00231 422 aa18.78■□□□□ 0.6
SMC4-209ENST00000468653 SYNCRIPO60506 623 aaKnown RBP18.78■□□□□ 0.6
SMC4-209ENST00000468653 RNASEH1O60930 286 aaKnown RBP18.78■□□□□ 0.6
SMC4-209ENST00000468653 TRIM16O95361 564 aa18.78■□□□□ 0.6
SMC4-209ENST00000468653 KITP10721 976 aa18.78■□□□□ 0.6
SMC4-209ENST00000468653 LIG3P49916 1009 aa18.78■□□□□ 0.6
SMC4-209ENST00000468653 NAGLUP54802 743 aa18.78■□□□□ 0.6
SMC4-209ENST00000468653 ENPP2Q13822 863 aa18.78■□□□□ 0.6
SMC4-209ENST00000468653 ZNF284Q2VY69 593 aa18.78■□□□□ 0.6
SMC4-209ENST00000468653 TXNDC11Q6PKC3 985 aa18.78■□□□□ 0.6
SMC4-209ENST00000468653 MACC1Q6ZN28 852 aa18.78■□□□□ 0.6
SMC4-209ENST00000468653 TECPR1Q7Z6L1 1165 aa18.78■□□□□ 0.6
SMC4-209ENST00000468653 TXNDC5Q8NBS9 432 aaKnown RBP18.78■□□□□ 0.6
SMC4-209ENST00000468653 NAT14Q8WUY8 206 aa18.78■□□□□ 0.6
SMC4-209ENST00000468653 C10orf82Q8WW14 230 aa18.78■□□□□ 0.6
SMC4-209ENST00000468653 PTERQ96BW5 349 aa18.78■□□□□ 0.6
SMC4-209ENST00000468653 RIOK2Q9BVS4 552 aaKnown RBP18.78■□□□□ 0.6
SMC4-209ENST00000468653 TFB2MQ9H5Q4 396 aaKnown RBP18.78■□□□□ 0.6
SMC4-209ENST00000468653 UBE2ZQ9H832 354 aaPredicted RBP18.78■□□□□ 0.6
SMC4-209ENST00000468653 NFKBIL1Q9UBC1 381 aaPredicted RBP18.78■□□□□ 0.6
SMC4-209ENST00000468653 DHRS7Q9Y394 339 aa18.78■□□□□ 0.6
SMC4-209ENST00000468653 A0A0G2JND7 137 aa18.78■□□□□ 0.6
SMC4-209ENST00000468653 SOX1O00570 391 aaPredicted RBP18.78■□□□□ 0.6
SMC4-209ENST00000468653 WNT9AO14904 365 aa18.78■□□□□ 0.6
SMC4-209ENST00000468653 MBTPS2O43462 519 aa18.78■□□□□ 0.6
SMC4-209ENST00000468653 KIAA0754O94854 1291 aa18.78■□□□□ 0.6
SMC4-209ENST00000468653 HSPA4LO95757 839 aa18.78■□□□□ 0.6
SMC4-209ENST00000468653 ITGB6P18564 788 aa18.78■□□□□ 0.6
SMC4-209ENST00000468653 KIR2DL1P43626 348 aaPredicted RBP18.78■□□□□ 0.6
SMC4-209ENST00000468653 CLCN7P51798 805 aa18.78■□□□□ 0.6
SMC4-209ENST00000468653 NRSN1Q8IZ57 195 aa18.78■□□□□ 0.6
SMC4-209ENST00000468653 TRAM1L1Q8N609 369 aa18.78■□□□□ 0.6
SMC4-209ENST00000468653 CCNYL1Q8N7R7 359 aa18.78■□□□□ 0.6
SMC4-209ENST00000468653 GIMAP7Q8NHV1 300 aa18.78■□□□□ 0.6
SMC4-209ENST00000468653 DTX3LQ8TDB6 740 aa18.78■□□□□ 0.6
SMC4-209ENST00000468653 LINGO1Q96FE5 620 aa18.78■□□□□ 0.6
SMC4-209ENST00000468653 HDAC8Q9BY41 377 aa18.78■□□□□ 0.6
SMC4-209ENST00000468653 KCNK12Q9HB15 430 aa18.78■□□□□ 0.6
SMC4-209ENST00000468653 MARCOQ9UEW3 520 aaPredicted RBP18.78■□□□□ 0.6
SMC4-209ENST00000468653 DNAJC16Q9Y2G8 782 aa18.78■□□□□ 0.6
SMC4-209ENST00000468653 NEMP2A6NFY4 417 aa18.77■□□□□ 0.6
SMC4-209ENST00000468653 CCT8L1PA6NM43 557 aa18.77■□□□□ 0.6
SMC4-209ENST00000468653 AREL1O15033 823 aa18.77■□□□□ 0.6
SMC4-209ENST00000468653 SPINT1O43278 529 aa18.77■□□□□ 0.6
SMC4-209ENST00000468653 SMIM24O75264 130 aa18.77■□□□□ 0.6
SMC4-209ENST00000468653 SLC25A14O95258 325 aaPredicted RBP18.77■□□□□ 0.6
SMC4-209ENST00000468653 ARFIP2P53365 341 aa18.77■□□□□ 0.6
SMC4-209ENST00000468653 DNAJB13P59910 316 aa18.77■□□□□ 0.6
SMC4-209ENST00000468653 CAMK2GQ13555 558 aaPredicted RBP18.77■□□□□ 0.6
SMC4-209ENST00000468653 GLIPR1L2Q4G1C9 344 aa18.77■□□□□ 0.6
SMC4-209ENST00000468653 GPRC6AQ5T6X5 926 aa18.77■□□□□ 0.6
SMC4-209ENST00000468653 HENMT1Q5T8I9 393 aaKnown RBP18.77■□□□□ 0.6
SMC4-209ENST00000468653 RALGPS2Q86X27 583 aaPredicted RBP18.77■□□□□ 0.6
SMC4-209ENST00000468653 SLC22A9Q8IVM8 553 aa18.77■□□□□ 0.6
SMC4-209ENST00000468653 CPNE9Q8IYJ1 553 aa18.77■□□□□ 0.6
SMC4-209ENST00000468653 PLCD3Q8N3E9 789 aa18.77■□□□□ 0.6
SMC4-209ENST00000468653 SLC44A3Q8N4M1 653 aa18.77■□□□□ 0.6
SMC4-209ENST00000468653 RHEBL1Q8TAI7 183 aa18.77■□□□□ 0.6
SMC4-209ENST00000468653 STAG3L4Q8TBR4 150 aa18.77■□□□□ 0.6
SMC4-209ENST00000468653 EZH1Q92800 747 aaPredicted RBP18.77■□□□□ 0.6
SMC4-209ENST00000468653 INPP5DQ92835 1189 aa18.77■□□□□ 0.6
SMC4-209ENST00000468653 KIAA1191Q96A73 305 aa18.77■□□□□ 0.6
SMC4-209ENST00000468653 DCUN1D1Q96GG9 259 aa18.77■□□□□ 0.6
SMC4-209ENST00000468653 SORT1Q99523 831 aa18.77■□□□□ 0.6
SMC4-209ENST00000468653 ZSCAN5AQ9BUG6 496 aa18.77■□□□□ 0.6
SMC4-209ENST00000468653 CYP4F12Q9HCS2 524 aa18.77■□□□□ 0.6
SMC4-209ENST00000468653 TRPV5Q9NQA5 729 aa18.77■□□□□ 0.6
SMC4-209ENST00000468653 SMOXQ9NWM0 555 aa18.77■□□□□ 0.6
SMC4-209ENST00000468653 PIAS3Q9Y6X2 628 aa18.77■□□□□ 0.6
SMC4-209ENST00000468653 SZT2Q5T011 3432 aa18.77■□□□□ 0.59
SMC4-209ENST00000468653 A8MT66 165 aa18.76■□□□□ 0.59
SMC4-209ENST00000468653 IPO13O94829 963 aaKnown RBP18.76■□□□□ 0.59
SMC4-209ENST00000468653 TPBGLP0DKB5 382 aa18.76■□□□□ 0.59
SMC4-209ENST00000468653 AKT1P31749 480 aa18.76■□□□□ 0.59
SMC4-209ENST00000468653 P2RY2P41231 377 aa18.76■□□□□ 0.59
SMC4-209ENST00000468653 KCNC1P48547 511 aa18.76■□□□□ 0.59
SMC4-209ENST00000468653 PON2Q15165 354 aa18.76■□□□□ 0.59
SMC4-209ENST00000468653 CFAP157Q5JU67 520 aa18.76■□□□□ 0.59
SMC4-209ENST00000468653 SDE2Q6IQ49 451 aa18.76■□□□□ 0.59
SMC4-209ENST00000468653 CCDC121Q6ZUS5 278 aa18.76■□□□□ 0.59
SMC4-209ENST00000468653 TRPM8Q7Z2W7 1104 aa18.76■□□□□ 0.59
SMC4-209ENST00000468653 WDR75Q8IWA0 830 aaKnown RBP18.76■□□□□ 0.59
SMC4-209ENST00000468653 EEF1AKMT1Q8WVE0 214 aa18.76■□□□□ 0.59
SMC4-209ENST00000468653 EXT2Q93063 718 aa18.76■□□□□ 0.59
SMC4-209ENST00000468653 RAB7BQ96AH8 199 aa18.76■□□□□ 0.59
SMC4-209ENST00000468653 AP2M1Q96CW1 435 aa18.76■□□□□ 0.59
SMC4-209ENST00000468653 LRCH3Q96II8 777 aa18.76■□□□□ 0.59
SMC4-209ENST00000468653 RMDN2Q96LZ7 410 aa18.76■□□□□ 0.59
SMC4-209ENST00000468653 RSPH9Q9H1X1 276 aaPredicted RBP18.76■□□□□ 0.59
SMC4-209ENST00000468653 C8orf33Q9H7E9 229 aaPredicted RBP18.76■□□□□ 0.59
SMC4-209ENST00000468653 HEBP1Q9NRV9 189 aa18.76■□□□□ 0.59
SMC4-209ENST00000468653 TMPRSS11EQ9UL52 423 aa18.76■□□□□ 0.59
SMC4-209ENST00000468653 RNF112Q9ULX5 631 aa18.76■□□□□ 0.59
SMC4-209ENST00000468653 IGLV3-16A0A075B6K0 115 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms