RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 CCDC112Q8NEF3 446 aa24.17■■□□□ 1.46
PTCH1-210ENST00000468211 GLYATL1Q969I3 302 aa24.17■■□□□ 1.46
PTCH1-210ENST00000468211 PLEKHG4BQ96PX9 1271 aa24.17■■□□□ 1.46
PTCH1-210ENST00000468211 CTRCQ99895 268 aa24.17■■□□□ 1.46
PTCH1-210ENST00000468211 ARHGAP9Q9BRR9 750 aa24.17■■□□□ 1.46
PTCH1-210ENST00000468211 ZSCAN5AQ9BUG6 496 aa24.17■■□□□ 1.46
PTCH1-210ENST00000468211 GPR63Q9BZJ6 419 aa24.17■■□□□ 1.46
PTCH1-210ENST00000468211 SPRY4Q9C004 299 aa24.17■■□□□ 1.46
PTCH1-210ENST00000468211 UBP1Q9NZI7 540 aa24.17■■□□□ 1.46
PTCH1-210ENST00000468211 NFKBIL1Q9UBC1 381 aaPredicted RBP24.17■■□□□ 1.46
PTCH1-210ENST00000468211 CPNE7Q9UBL6 633 aa24.17■■□□□ 1.46
PTCH1-210ENST00000468211 TMPRSS11EQ9UL52 423 aa24.17■■□□□ 1.46
PTCH1-210ENST00000468211 KIR2DS5A0A0G2JLQ3 304 aa24.16■■□□□ 1.46
PTCH1-210ENST00000468211 A0A0G2JNG1 304 aa24.16■■□□□ 1.46
PTCH1-210ENST00000468211 KIR2DS3K7RE56 304 aa24.16■■□□□ 1.46
PTCH1-210ENST00000468211 CHUKO15111 745 aa24.16■■□□□ 1.46
PTCH1-210ENST00000468211 SLC28A2O43868 658 aa24.16■■□□□ 1.46
PTCH1-210ENST00000468211 MTX2O75431 263 aa24.16■■□□□ 1.46
PTCH1-210ENST00000468211 PMPCBO75439 489 aa24.16■■□□□ 1.46
PTCH1-210ENST00000468211 PTPN3P26045 913 aa24.16■■□□□ 1.46
PTCH1-210ENST00000468211 ATP1A2P50993 1020 aa24.16■■□□□ 1.46
PTCH1-210ENST00000468211 UBE2IP63279 158 aaKnown RBP24.16■■□□□ 1.46
PTCH1-210ENST00000468211 NFKB2Q00653 900 aa24.16■■□□□ 1.46
PTCH1-210ENST00000468211 KIR2DS5Q14953 304 aa24.16■■□□□ 1.46
PTCH1-210ENST00000468211 CLCA4Q14CN2 919 aa24.16■■□□□ 1.46
PTCH1-210ENST00000468211 NOMO1Q15155 1222 aa24.16■■□□□ 1.46
PTCH1-210ENST00000468211 TEX44Q53QW1 395 aa24.16■■□□□ 1.46
PTCH1-210ENST00000468211 DCAF12Q5T6F0 453 aa24.16■■□□□ 1.46
PTCH1-210ENST00000468211 RTP4Q96DX8 246 aa24.16■■□□□ 1.46
PTCH1-210ENST00000468211 ASPSCR1Q9BZE9 553 aa24.16■■□□□ 1.46
PTCH1-210ENST00000468211 OSGEPL1Q9H4B0 414 aa24.16■■□□□ 1.46
PTCH1-210ENST00000468211 APMAPQ9HDC9 416 aa24.16■■□□□ 1.46
PTCH1-210ENST00000468211 KLHL3Q9UH77 587 aa24.16■■□□□ 1.46
PTCH1-210ENST00000468211 NDST3O95803 873 aa24.15■■□□□ 1.46
PTCH1-210ENST00000468211 PECAM1P16284 738 aaPredicted RBP24.15■■□□□ 1.46
PTCH1-210ENST00000468211 ZFXP17010 805 aaPredicted RBP24.15■■□□□ 1.46
PTCH1-210ENST00000468211 COMTP21964 271 aa24.15■■□□□ 1.46
PTCH1-210ENST00000468211 CD68P34810 354 aaPredicted RBP24.15■■□□□ 1.46
PTCH1-210ENST00000468211 CDKN2BP42772 138 aa24.15■■□□□ 1.46
PTCH1-210ENST00000468211 CLCNKAP51800 687 aa24.15■■□□□ 1.46
PTCH1-210ENST00000468211 EPHA4P54764 986 aa24.15■■□□□ 1.46
PTCH1-210ENST00000468211 MC2RQ01718 297 aa24.15■■□□□ 1.46
PTCH1-210ENST00000468211 ADCY2Q08462 1091 aa24.15■■□□□ 1.46
PTCH1-210ENST00000468211 PRKD1Q15139 912 aaPredicted RBP24.15■■□□□ 1.46
PTCH1-210ENST00000468211 SLC14A2Q15849 920 aa24.15■■□□□ 1.46
PTCH1-210ENST00000468211 TAZQ16635 292 aa24.15■■□□□ 1.46
PTCH1-210ENST00000468211 PHYKPLQ8IUZ5 450 aa24.15■■□□□ 1.46
PTCH1-210ENST00000468211 ZNF547Q8IVP9 402 aa24.15■■□□□ 1.46
PTCH1-210ENST00000468211 RHOT1Q8IXI2 618 aa24.15■■□□□ 1.46
PTCH1-210ENST00000468211 CACNA2D3Q8IZS8 1091 aa24.15■■□□□ 1.46
PTCH1-210ENST00000468211 IL22RA1Q8N6P7 574 aa24.15■■□□□ 1.46
PTCH1-210ENST00000468211 SH3KBP1Q96B97 665 aa24.15■■□□□ 1.46
PTCH1-210ENST00000468211 STN1Q9H668 368 aaKnown RBP24.15■■□□□ 1.46
PTCH1-210ENST00000468211 BPIFA1Q9NP55 256 aa24.15■■□□□ 1.46
PTCH1-210ENST00000468211 OGFRQ9NZT2 677 aa24.15■■□□□ 1.46
PTCH1-210ENST00000468211 PILRAQ9UKJ1 303 aa24.15■■□□□ 1.46
PTCH1-210ENST00000468211 A0A0A6YYK5 440 aaPredicted RBP24.14■■□□□ 1.45
PTCH1-210ENST00000468211 PRR19A6NJB7 356 aa24.14■■□□□ 1.45
PTCH1-210ENST00000468211 RAD1O60671 282 aa24.14■■□□□ 1.45
PTCH1-210ENST00000468211 SLC2A4P14672 509 aa24.14■■□□□ 1.45
PTCH1-210ENST00000468211 RAB15P59190 212 aa24.14■■□□□ 1.45
PTCH1-210ENST00000468211 WASHC5Q12768 1159 aa24.14■■□□□ 1.45
PTCH1-210ENST00000468211 TCEAL1Q15170 157 aa24.14■■□□□ 1.45
PTCH1-210ENST00000468211 XKR5Q6UX68 686 aa24.14■■□□□ 1.45
PTCH1-210ENST00000468211 TEKT5Q96M29 485 aa24.14■■□□□ 1.45
PTCH1-210ENST00000468211 GOLPH3Q9H4A6 298 aa24.14■■□□□ 1.45
PTCH1-210ENST00000468211 STARD5Q9NSY2 213 aa24.14■■□□□ 1.45
PTCH1-210ENST00000468211 DDX56Q9NY93 547 aaKnown RBP24.14■■□□□ 1.45
PTCH1-210ENST00000468211 ZNF624Q9P2J8 865 aaPredicted RBP24.14■■□□□ 1.45
PTCH1-210ENST00000468211 SPTA1P02549 2419 aa24.14■■□□□ 1.45
PTCH1-210ENST00000468211 OR5K4A6NMS3 321 aa24.13■■□□□ 1.45
PTCH1-210ENST00000468211 ZNF7P17097 686 aaPredicted RBP24.13■■□□□ 1.45
PTCH1-210ENST00000468211 SLC19A1P41440 591 aa24.13■■□□□ 1.45
PTCH1-210ENST00000468211 SLC1A1P43005 524 aa24.13■■□□□ 1.45
PTCH1-210ENST00000468211 GFERP55789 205 aa24.13■■□□□ 1.45
PTCH1-210ENST00000468211 TIPARPQ7Z3E1 657 aaKnown RBP24.13■■□□□ 1.45
PTCH1-210ENST00000468211 PRICKLE2Q7Z3G6 844 aa24.13■■□□□ 1.45
PTCH1-210ENST00000468211 RNF214Q8ND24 703 aa24.13■■□□□ 1.45
PTCH1-210ENST00000468211 DNAJC16Q9Y2G8 782 aa24.13■■□□□ 1.45
PTCH1-210ENST00000468211 SLC30A1Q9Y6M5 507 aa24.13■■□□□ 1.45
PTCH1-210ENST00000468211 LILRA5A6NI73 299 aa24.12■■□□□ 1.45
PTCH1-210ENST00000468211 F5H423 210 aaPredicted RBP24.12■■□□□ 1.45
PTCH1-210ENST00000468211 CST8O60676 142 aa24.12■■□□□ 1.45
PTCH1-210ENST00000468211 TPM1P09493 284 aa24.12■■□□□ 1.45
PTCH1-210ENST00000468211 BRAFP15056 766 aa24.12■■□□□ 1.45
PTCH1-210ENST00000468211 XRCC1P18887 633 aaPredicted RBP24.12■■□□□ 1.45
PTCH1-210ENST00000468211 SEPT7Q16181 437 aaKnown RBP24.12■■□□□ 1.45
PTCH1-210ENST00000468211 INSCQ1MX18 579 aa24.12■■□□□ 1.45
PTCH1-210ENST00000468211 ODF2Q5BJF6 829 aa24.12■■□□□ 1.45
PTCH1-210ENST00000468211 KAZNQ674X7 775 aa24.12■■□□□ 1.45
PTCH1-210ENST00000468211 PDPK2PQ6A1A2 396 aa24.12■■□□□ 1.45
PTCH1-210ENST00000468211 KDELC1Q6UW63 502 aa24.12■■□□□ 1.45
PTCH1-210ENST00000468211 SPOCD1Q6ZMY3 1216 aa24.12■■□□□ 1.45
PTCH1-210ENST00000468211 LRRTM4Q86VH4 590 aa24.12■■□□□ 1.45
PTCH1-210ENST00000468211 LDHAL6BQ9BYZ2 381 aaPredicted RBP24.12■■□□□ 1.45
PTCH1-210ENST00000468211 FBXO8Q9NRD0 319 aa24.12■■□□□ 1.45
PTCH1-210ENST00000468211 RAD18Q9NS91 495 aa24.12■■□□□ 1.45
PTCH1-210ENST00000468211 MN1Q10571 1320 aaPredicted RBP24.11■■□□□ 1.45
PTCH1-210ENST00000468211 GPR89AB7ZAQ6 455 aa24.11■■□□□ 1.45
PTCH1-210ENST00000468211 SPOPO43791 374 aa24.11■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms