RNA–Protein interactions for RNA: ENST00000467853.5

PSMD6-204, Transcript of proteasome 26S subunit, non-ATPase 6, humanhuman

TSL 1 (best)

Gene PSMD6, Length 4,583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD6-204ENST00000467853 OTUD3Q5T2D3 398 aaPredicted RBP6.3□□□□□ -1.4
PSMD6-204ENST00000467853 NANOGP8Q6NSW7 305 aa6.3□□□□□ -1.4
PSMD6-204ENST00000467853 UGT3A1Q6NUS8 523 aa6.3□□□□□ -1.4
PSMD6-204ENST00000467853 CRTC3Q6UUV7 619 aa6.3□□□□□ -1.4
PSMD6-204ENST00000467853 GPRIN1Q7Z2K8 1008 aa6.3□□□□□ -1.4
PSMD6-204ENST00000467853 ZC3H7AQ8IWR0 971 aaKnown RBP6.3□□□□□ -1.4
PSMD6-204ENST00000467853 EID3Q8N140 333 aa6.3□□□□□ -1.4
PSMD6-204ENST00000467853 SVOPQ8N4V2 548 aa6.3□□□□□ -1.4
PSMD6-204ENST00000467853 PIK3C3Q8NEB9 887 aa6.3□□□□□ -1.4
PSMD6-204ENST00000467853 OR4L1Q8NH43 312 aa6.3□□□□□ -1.4
PSMD6-204ENST00000467853 C1QTNF3Q9BXJ4 246 aa6.3□□□□□ -1.4
PSMD6-204ENST00000467853 NANOGQ9H9S0 305 aa6.3□□□□□ -1.4
PSMD6-204ENST00000467853 TNFRSF12AQ9NP84 129 aa6.3□□□□□ -1.4
PSMD6-204ENST00000467853 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.3□□□□□ -1.41e-8■■■■■ 26.8
PSMD6-204ENST00000467853 SFMBT1Q9UHJ3 866 aa6.3□□□□□ -1.4
PSMD6-204ENST00000467853 TPRKBQ9Y3C4 175 aa6.3□□□□□ -1.4
PSMD6-204ENST00000467853 PCDHGA11Q9Y5H2 935 aa6.3□□□□□ -1.4
PSMD6-204ENST00000467853 TNPO3Q9Y5L0 923 aaKnown RBP6.3□□□□□ -1.4
PSMD6-204ENST00000467853 COMMD10Q9Y6G5 202 aa6.3□□□□□ -1.4
PSMD6-204ENST00000467853 LCHNA4D1U4 455 aa6.3□□□□□ -1.4
PSMD6-204ENST00000467853 I6L893 689 aaPredicted RBP6.3□□□□□ -1.4
PSMD6-204ENST00000467853 NDUFS3O75489 264 aa6.3□□□□□ -1.4
PSMD6-204ENST00000467853 ZNF182P17025 639 aaPredicted RBP6.3□□□□□ -1.4
PSMD6-204ENST00000467853 ITIH1P19827 911 aa6.3□□□□□ -1.4
PSMD6-204ENST00000467853 ETFBP38117 255 aa6.3□□□□□ -1.4
PSMD6-204ENST00000467853 CCR3P51677 355 aa6.3□□□□□ -1.4
PSMD6-204ENST00000467853 ARHGDIAP52565 204 aa6.3□□□□□ -1.4
PSMD6-204ENST00000467853 KCNC4Q03721 635 aa6.3□□□□□ -1.4
PSMD6-204ENST00000467853 ACVR1Q04771 509 aa6.3□□□□□ -1.4
PSMD6-204ENST00000467853 IRF5Q13568 498 aa6.3□□□□□ -1.4
PSMD6-204ENST00000467853 PWP1Q13610 501 aa6.3□□□□□ -1.4
PSMD6-204ENST00000467853 ZNF280DQ6N043 979 aa6.3□□□□□ -1.4
PSMD6-204ENST00000467853 GPRIN3Q6ZVF9 776 aa6.3□□□□□ -1.4
PSMD6-204ENST00000467853 SLC15A4Q8N697 577 aa6.3□□□□□ -1.4
PSMD6-204ENST00000467853 OR13J1Q8NGT2 312 aa6.3□□□□□ -1.4
PSMD6-204ENST00000467853 DNAJB3Q8WWF6 145 aa6.3□□□□□ -1.4
PSMD6-204ENST00000467853 SNX19Q92543 992 aa6.3□□□□□ -1.4
PSMD6-204ENST00000467853 EFHD2Q96C19 240 aaPredicted RBP6.3□□□□□ -1.4
PSMD6-204ENST00000467853 MUS81Q96NY9 551 aa6.3□□□□□ -1.4
PSMD6-204ENST00000467853 HGH1Q9BTY7 390 aa6.3□□□□□ -1.4
PSMD6-204ENST00000467853 ZYG11BQ9C0D3 744 aa6.3□□□□□ -1.4
PSMD6-204ENST00000467853 TRNAU1APQ9NX07 287 aaKnown RBP6.3□□□□□ -1.4
PSMD6-204ENST00000467853 SCN3BQ9NY72 215 aa6.3□□□□□ -1.4
PSMD6-204ENST00000467853 CRYL1Q9Y2S2 319 aa6.3□□□□□ -1.4
PSMD6-204ENST00000467853 GIT1Q9Y2X7 761 aa6.3□□□□□ -1.4
PSMD6-204ENST00000467853 TNS1Q9HBL0 1735 aaKnown RBP6.29□□□□□ -1.4
PSMD6-204ENST00000467853 MGEA5O60502 916 aa6.29□□□□□ -1.4
PSMD6-204ENST00000467853 KCNH1O95259 989 aa6.29□□□□□ -1.4
PSMD6-204ENST00000467853 RPS17P08708 135 aaKnown RBP6.29□□□□□ -1.4
PSMD6-204ENST00000467853 PRR35P0CG20 571 aa6.29□□□□□ -1.4
PSMD6-204ENST00000467853 NFKBIAP25963 317 aa6.29□□□□□ -1.4
PSMD6-204ENST00000467853 AKT1P31749 480 aa6.29□□□□□ -1.4
PSMD6-204ENST00000467853 PBX3P40426 434 aa6.29□□□□□ -1.4
PSMD6-204ENST00000467853 EIF2B2P49770 351 aaKnown RBP6.29□□□□□ -1.4
PSMD6-204ENST00000467853 EN1Q05925 392 aaPredicted RBP6.29□□□□□ -1.4
PSMD6-204ENST00000467853 IL10RBQ08334 325 aa6.29□□□□□ -1.4
PSMD6-204ENST00000467853 MFSD10Q14728 455 aa6.29□□□□□ -1.4
PSMD6-204ENST00000467853 ACOX1Q15067 660 aa6.29□□□□□ -1.4
PSMD6-204ENST00000467853 SMU1Q2TAY7 513 aa6.29□□□□□ -1.4
PSMD6-204ENST00000467853 ZNF789Q5FWF6 425 aa6.29□□□□□ -1.4
PSMD6-204ENST00000467853 AFTPHQ6ULP2 937 aa6.29□□□□□ -1.4
PSMD6-204ENST00000467853 ADCK1Q86TW2 530 aa6.29□□□□□ -1.4
PSMD6-204ENST00000467853 ZFAND4Q86XD8 727 aa6.29□□□□□ -1.4
PSMD6-204ENST00000467853 ANKRD13BQ86YJ7 626 aa6.29□□□□□ -1.4
PSMD6-204ENST00000467853 FNDC5Q8NAU1 212 aa6.29□□□□□ -1.4
PSMD6-204ENST00000467853 BRSK1Q8TDC3 778 aa6.29□□□□□ -1.4
PSMD6-204ENST00000467853 TMBIM1Q969X1 311 aa6.29□□□□□ -1.4
PSMD6-204ENST00000467853 MARVELD3Q96A59 401 aa6.29□□□□□ -1.4
PSMD6-204ENST00000467853 PTERQ96BW5 349 aa6.29□□□□□ -1.4
PSMD6-204ENST00000467853 PABPC5Q96DU9 382 aaKnown RBP6.29□□□□□ -1.4
PSMD6-204ENST00000467853 CCDC115Q96NT0 180 aa6.29□□□□□ -1.4
PSMD6-204ENST00000467853 ATOH8Q96SQ7 321 aa6.29□□□□□ -1.4
PSMD6-204ENST00000467853 C17orf80Q9BSJ5 609 aa6.29□□□□□ -1.4
PSMD6-204ENST00000467853 POLR1EQ9GZS1 481 aaKnown RBP6.29□□□□□ -1.4
PSMD6-204ENST00000467853 NACA2Q9H009 215 aa6.29□□□□□ -1.4
PSMD6-204ENST00000467853 BTRCQ9Y297 605 aa6.29□□□□□ -1.4
PSMD6-204ENST00000467853 AURKAO14965 403 aa6.29□□□□□ -1.4
PSMD6-204ENST00000467853 DYNC1LI2O43237 492 aaPredicted RBP6.29□□□□□ -1.4
PSMD6-204ENST00000467853 PRSS23O95084 383 aa6.29□□□□□ -1.4
PSMD6-204ENST00000467853 CRHBPP24387 322 aa6.29□□□□□ -1.4
PSMD6-204ENST00000467853 MTHFRP42898 656 aa6.29□□□□□ -1.4
PSMD6-204ENST00000467853 MLLT6P55198 1093 aaPredicted RBP6.29□□□□□ -1.4
PSMD6-204ENST00000467853 ZNF235Q14590 738 aa6.29□□□□□ -1.4
PSMD6-204ENST00000467853 C6orf141Q5SZD1 244 aa6.29□□□□□ -1.4
PSMD6-204ENST00000467853 MSANTD2Q6P1R3 559 aa6.29□□□□□ -1.4
PSMD6-204ENST00000467853 RPS27LQ71UM5 84 aaKnown RBP6.29□□□□□ -1.4
PSMD6-204ENST00000467853 HIPK1Q86Z02 1210 aa6.29□□□□□ -1.4
PSMD6-204ENST00000467853 SPATA2LQ8IUW3 424 aaPredicted RBP6.29□□□□□ -1.4
PSMD6-204ENST00000467853 RIMKLAQ8IXN7 391 aa6.29□□□□□ -1.4
PSMD6-204ENST00000467853 FAM9CQ8IZT9 166 aa6.29□□□□□ -1.4
PSMD6-204ENST00000467853 ZNF513Q8N8E2 541 aaPredicted RBP6.29□□□□□ -1.4
PSMD6-204ENST00000467853 ARRDC4Q8NCT1 418 aa6.29□□□□□ -1.4
PSMD6-204ENST00000467853 SMG8Q8ND04 991 aaKnown RBP6.29□□□□□ -1.4
PSMD6-204ENST00000467853 OR7A2PQ8NGA2 310 aa6.29□□□□□ -1.4
PSMD6-204ENST00000467853 OR5K1Q8NHB7 308 aa6.29□□□□□ -1.4
PSMD6-204ENST00000467853 CASP10Q92851 521 aa6.29□□□□□ -1.4
PSMD6-204ENST00000467853 TAMM41Q96BW9 452 aa6.29□□□□□ -1.4
PSMD6-204ENST00000467853 VMP1Q96GC9 406 aa6.29□□□□□ -1.4
PSMD6-204ENST00000467853 PPP3R2Q96LZ3 170 aa6.29□□□□□ -1.4
PSMD6-204ENST00000467853 MROQ9BYG7 248 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms