RNA–Protein interactions for RNA: ENST00000467468.5

SMC4-208, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 566 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-208ENST00000467468 CCR10P46092 362 aa4.16□□□□□ -1.74
SMC4-208ENST00000467468 NPY4RP50391 375 aa4.16□□□□□ -1.74
SMC4-208ENST00000467468 METAP2P50579 478 aaKnown RBP eCLIP4.16□□□□□ -1.74
SMC4-208ENST00000467468 RASSF2P50749 326 aa4.16□□□□□ -1.74
SMC4-208ENST00000467468 RAB28P51157 221 aa4.16□□□□□ -1.74
SMC4-208ENST00000467468 RAD23BP54727 409 aa4.16□□□□□ -1.74
SMC4-208ENST00000467468 CDH12P55289 794 aa4.16□□□□□ -1.74
SMC4-208ENST00000467468 SPOCK1Q08629 439 aa4.16□□□□□ -1.74
SMC4-208ENST00000467468 GRSF1Q12849 480 aaKnown RBP eCLIP4.16□□□□□ -1.742e-14■■■■■ 48.8
SMC4-208ENST00000467468 CBWD6Q4V339 395 aa4.16□□□□□ -1.74
SMC4-208ENST00000467468 CBWD3Q5JTY5 395 aa4.16□□□□□ -1.74
SMC4-208ENST00000467468 ARMC4Q5T2S8 1044 aa4.16□□□□□ -1.74
SMC4-208ENST00000467468 ANKRD54Q6NXT1 300 aa4.16□□□□□ -1.74
SMC4-208ENST00000467468 CACNA2D4Q7Z3S7 1137 aa4.16□□□□□ -1.74
SMC4-208ENST00000467468 PATL1Q86TB9 770 aaKnown RBP4.16□□□□□ -1.74
SMC4-208ENST00000467468 ADIPOR2Q86V24 386 aa4.16□□□□□ -1.74
SMC4-208ENST00000467468 PELI3Q8N2H9 469 aa4.16□□□□□ -1.74
SMC4-208ENST00000467468 AGBL3Q8NEM8 1001 aa4.16□□□□□ -1.74
SMC4-208ENST00000467468 GDAP1Q8TB36 358 aa4.16□□□□□ -1.74
SMC4-208ENST00000467468 SETD6Q8TBK2 473 aa4.16□□□□□ -1.74
SMC4-208ENST00000467468 SECISBP2LQ93073 1101 aaKnown RBP4.16□□□□□ -1.74
SMC4-208ENST00000467468 LINC00615Q96LM1 132 aaPredicted RBP4.16□□□□□ -1.74
SMC4-208ENST00000467468 ZNF830Q96NB3 372 aaPredicted RBP4.16□□□□□ -1.74
SMC4-208ENST00000467468 FNBP1Q96RU3 617 aa4.16□□□□□ -1.74
SMC4-208ENST00000467468 THUMPD3Q9BV44 507 aaKnown RBP4.16□□□□□ -1.74
SMC4-208ENST00000467468 MRPL9Q9BYD2 267 aaKnown RBP4.16□□□□□ -1.74
SMC4-208ENST00000467468 ISCUQ9H1K1 167 aa4.16□□□□□ -1.74
SMC4-208ENST00000467468 SLCO5A1Q9H2Y9 848 aa4.16□□□□□ -1.74
SMC4-208ENST00000467468 PIGMQ9H3S5 423 aa4.16□□□□□ -1.74
SMC4-208ENST00000467468 RETREG1Q9H6L5 497 aa4.16□□□□□ -1.74
SMC4-208ENST00000467468 MAP6D1Q9H9H5 199 aa4.16□□□□□ -1.74
SMC4-208ENST00000467468 GPR108Q9NPR9 543 aa4.16□□□□□ -1.74
SMC4-208ENST00000467468 SIRT3Q9NTG7 399 aaPredicted RBP4.16□□□□□ -1.74
SMC4-208ENST00000467468 OLAHQ9NV23 265 aa4.16□□□□□ -1.74
SMC4-208ENST00000467468 HIF1ANQ9NWT6 349 aa4.16□□□□□ -1.74
SMC4-208ENST00000467468 IL17BQ9UHF5 180 aa4.16□□□□□ -1.74
SMC4-208ENST00000467468 STMND1H3BQB6 276 aa4.15□□□□□ -1.75
SMC4-208ENST00000467468 RSL1D1O76021 490 aaKnown RBP4.15□□□□□ -1.75
SMC4-208ENST00000467468 SLCO2B1O94956 709 aa4.15□□□□□ -1.75
SMC4-208ENST00000467468 BCL10O95999 233 aa4.15□□□□□ -1.75
SMC4-208ENST00000467468 CYC1P08574 325 aa4.15□□□□□ -1.75
SMC4-208ENST00000467468 HOXB2P14652 356 aa4.15□□□□□ -1.75
SMC4-208ENST00000467468 ATP6V1B1P15313 513 aa4.15□□□□□ -1.75
SMC4-208ENST00000467468 DDX5P17844 614 aaKnown RBP4.15□□□□□ -1.75
SMC4-208ENST00000467468 PPP3CCP48454 512 aa4.15□□□□□ -1.75
SMC4-208ENST00000467468 TMPRSS3P57727 454 aa4.15□□□□□ -1.75
SMC4-208ENST00000467468 SIRPAP78324 504 aa4.15□□□□□ -1.75
SMC4-208ENST00000467468 RALGDSQ12967 914 aa4.15□□□□□ -1.75
SMC4-208ENST00000467468 TNIP1Q15025 636 aa4.15□□□□□ -1.75
SMC4-208ENST00000467468 SNAPC1Q16533 368 aa4.15□□□□□ -1.75
SMC4-208ENST00000467468 WASHC2DQ5SRD0 308 aa4.15□□□□□ -1.75
SMC4-208ENST00000467468 LCE1AQ5T7P2 110 aa4.15□□□□□ -1.75
SMC4-208ENST00000467468 GGNBP1Q5YKI7 109 aa4.15□□□□□ -1.75
SMC4-208ENST00000467468 SIGIRRQ6IA17 410 aa4.15□□□□□ -1.75
SMC4-208ENST00000467468 CAVIN1Q6NZI2 390 aaKnown RBP4.15□□□□□ -1.75
SMC4-208ENST00000467468 METTL2BQ6P1Q9 378 aaKnown RBP4.15□□□□□ -1.75
SMC4-208ENST00000467468 DLK2Q6UY11 383 aa4.15□□□□□ -1.75
SMC4-208ENST00000467468 BHLHA9Q7RTU4 235 aa4.15□□□□□ -1.75
SMC4-208ENST00000467468 HAUS6Q7Z4H7 955 aa4.15□□□□□ -1.75
SMC4-208ENST00000467468 SDCCAG8Q86SQ7 713 aaPredicted RBP4.15□□□□□ -1.75
SMC4-208ENST00000467468 LDB1Q86U70 411 aaPredicted RBP4.15□□□□□ -1.75
SMC4-208ENST00000467468 IQCHQ86VS3 1027 aa4.15□□□□□ -1.75
SMC4-208ENST00000467468 GPSM1Q86YR5 675 aa4.15□□□□□ -1.75
SMC4-208ENST00000467468 MB21D2Q8IYB1 491 aaPredicted RBP4.15□□□□□ -1.75
SMC4-208ENST00000467468 FBXL14Q8N1E6 418 aa4.15□□□□□ -1.75
SMC4-208ENST00000467468 SPATA6LQ8N4H0 392 aa4.15□□□□□ -1.75
SMC4-208ENST00000467468 C7orf57Q8NEG2 295 aa4.15□□□□□ -1.75
SMC4-208ENST00000467468 CFAP61Q8NHU2 1237 aa4.15□□□□□ -1.75
SMC4-208ENST00000467468 TEKT4Q8WW24 435 aa4.15□□□□□ -1.75
SMC4-208ENST00000467468 ERGIC1Q969X5 290 aa4.15□□□□□ -1.75
SMC4-208ENST00000467468 METTL2AQ96IZ6 378 aaKnown RBP4.15□□□□□ -1.75
SMC4-208ENST00000467468 NUP85Q9BW27 656 aa4.15□□□□□ -1.75
SMC4-208ENST00000467468 HIPK2Q9H2X6 1198 aa4.15□□□□□ -1.75
SMC4-208ENST00000467468 KCNK15Q9H427 330 aa4.15□□□□□ -1.75
SMC4-208ENST00000467468 WDR26Q9H7D7 661 aa4.15□□□□□ -1.75
SMC4-208ENST00000467468 CATSPERBQ9H7T0 1116 aa4.15□□□□□ -1.75
SMC4-208ENST00000467468 DNAJC18Q9H819 358 aa4.15□□□□□ -1.75
SMC4-208ENST00000467468 ANKZF1Q9H8Y5 726 aa4.15□□□□□ -1.75
SMC4-208ENST00000467468 HAO2Q9NYQ3 351 aa4.15□□□□□ -1.75
SMC4-208ENST00000467468 DDX25Q9UHL0 483 aaKnown RBP4.15□□□□□ -1.75
SMC4-208ENST00000467468 HACL1Q9UJ83 578 aa4.15□□□□□ -1.75
SMC4-208ENST00000467468 RAI2Q9Y5P3 530 aa4.15□□□□□ -1.75
SMC4-208ENST00000467468 SNX5Q9Y5X3 404 aa4.15□□□□□ -1.75
SMC4-208ENST00000467468 EDDM13A0A1B0GTR0 161 aa4.14□□□□□ -1.75
SMC4-208ENST00000467468 BICDL2A1A5D9 508 aa4.14□□□□□ -1.75
SMC4-208ENST00000467468 CPED1A4D0V7 1026 aa4.14□□□□□ -1.75
SMC4-208ENST00000467468 PSMD14O00487 310 aa4.14□□□□□ -1.75
SMC4-208ENST00000467468 TNFRSF13BO14836 293 aaPredicted RBP4.14□□□□□ -1.75
SMC4-208ENST00000467468 SMAD6O43541 496 aaKnown RBP4.14□□□□□ -1.75
SMC4-208ENST00000467468 SPRY1O43609 319 aaPredicted RBP4.14□□□□□ -1.75
SMC4-208ENST00000467468 SYNCRIPO60506 623 aaKnown RBP4.14□□□□□ -1.75
SMC4-208ENST00000467468 DIAPH2O60879 1101 aa4.14□□□□□ -1.75
SMC4-208ENST00000467468 TRUB2O95900 331 aaKnown RBP4.14□□□□□ -1.75
SMC4-208ENST00000467468 GH2P01242 217 aa4.14□□□□□ -1.75
SMC4-208ENST00000467468 CYP1A2P05177 515 aa4.14□□□□□ -1.75
SMC4-208ENST00000467468 TGFB3P10600 412 aa4.14□□□□□ -1.75
SMC4-208ENST00000467468 VPREB1P12018 145 aa4.14□□□□□ -1.75
SMC4-208ENST00000467468 MATR3P43243 847 aaKnown RBP eCLIP4.14□□□□□ -1.757e-8■■□□□ 11.8
SMC4-208ENST00000467468 RFX2P48378 723 aa4.14□□□□□ -1.75
SMC4-208ENST00000467468 COMPP49747 757 aaPredicted RBP4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms