RNA–Protein interactions for RNA: ENST00000466969.1

UBR4-210, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-210ENST00000466969 RORAP35398 523 aa12.36□□□□□ -0.43
UBR4-210ENST00000466969 FOLR3P41439 243 aa12.36□□□□□ -0.43
UBR4-210ENST00000466969 GPR1P46091 355 aa12.36□□□□□ -0.43
UBR4-210ENST00000466969 POLR2LP62875 67 aaKnown RBP12.36□□□□□ -0.43
UBR4-210ENST00000466969 INO80DQ53TQ3 878 aaPredicted RBP12.36□□□□□ -0.43
UBR4-210ENST00000466969 PRAMEF13Q5VWM6 474 aa12.36□□□□□ -0.43
UBR4-210ENST00000466969 DENND2CQ68D51 928 aa12.36□□□□□ -0.43
UBR4-210ENST00000466969 PODNL1Q6PEZ8 512 aa12.36□□□□□ -0.43
UBR4-210ENST00000466969 TMEM110Q86TL2 294 aa12.36□□□□□ -0.43
UBR4-210ENST00000466969 KMT5CQ86Y97 462 aa12.36□□□□□ -0.43
UBR4-210ENST00000466969 CAMK1DQ8IU85 385 aa12.36□□□□□ -0.43
UBR4-210ENST00000466969 TTC30BQ8N4P2 665 aa12.36□□□□□ -0.43
UBR4-210ENST00000466969 TAB3Q8N5C8 712 aaPredicted RBP12.36□□□□□ -0.43
UBR4-210ENST00000466969 UBR7Q8N806 425 aa12.36□□□□□ -0.43
UBR4-210ENST00000466969 PLEKHG4BQ96PX9 1271 aa12.36□□□□□ -0.43
UBR4-210ENST00000466969 C7orf25Q9BPX7 421 aa12.36□□□□□ -0.43
UBR4-210ENST00000466969 MAGEH1Q9H213 219 aa12.36□□□□□ -0.43
UBR4-210ENST00000466969 KCTD10Q9H3F6 313 aa12.36□□□□□ -0.43
UBR4-210ENST00000466969 PCMTD2Q9NV79 361 aa12.36□□□□□ -0.43
UBR4-210ENST00000466969 DNAI1Q9UI46 699 aa12.36□□□□□ -0.43
UBR4-210ENST00000466969 DOCK10Q96BY6 2186 aa12.35□□□□□ -0.43
UBR4-210ENST00000466969 I6L893 689 aaPredicted RBP12.35□□□□□ -0.43
UBR4-210ENST00000466969 KDELR3O43731 214 aa12.35□□□□□ -0.43
UBR4-210ENST00000466969 STX10O60499 249 aa12.35□□□□□ -0.43
UBR4-210ENST00000466969 PRAMEF2O60811 474 aa12.35□□□□□ -0.43
UBR4-210ENST00000466969 CTAG2O75638 210 aa12.35□□□□□ -0.43
UBR4-210ENST00000466969 KLF7O75840 302 aaPredicted RBP12.35□□□□□ -0.43
UBR4-210ENST00000466969 ASMTLO95671 621 aa12.35□□□□□ -0.43
UBR4-210ENST00000466969 CALCAP01258 141 aa12.35□□□□□ -0.43
UBR4-210ENST00000466969 IFNA2P01563 188 aa12.35□□□□□ -0.43
UBR4-210ENST00000466969 AGXTP21549 392 aa12.35□□□□□ -0.43
UBR4-210ENST00000466969 SERPINA4P29622 427 aa12.35□□□□□ -0.43
UBR4-210ENST00000466969 ARG2P78540 354 aa12.35□□□□□ -0.43
UBR4-210ENST00000466969 HSD11B2P80365 405 aa12.35□□□□□ -0.43
UBR4-210ENST00000466969 PAK1Q13153 545 aa12.35□□□□□ -0.43
UBR4-210ENST00000466969 PLCL1Q15111 1095 aa12.35□□□□□ -0.43
UBR4-210ENST00000466969 GPR19Q15760 415 aa12.35□□□□□ -0.43
UBR4-210ENST00000466969 PTCHD3Q3KNS1 767 aa12.35□□□□□ -0.43
UBR4-210ENST00000466969 TMTC4Q5T4D3 741 aa12.35□□□□□ -0.43
UBR4-210ENST00000466969 PRAMEF17Q5VTA0 474 aa12.35□□□□□ -0.43
UBR4-210ENST00000466969 CERS6Q6ZMG9 384 aa12.35□□□□□ -0.43
UBR4-210ENST00000466969 LINC00696Q6ZRV3 163 aa12.35□□□□□ -0.43
UBR4-210ENST00000466969 GOT1L1Q8NHS2 421 aaPredicted RBP12.35□□□□□ -0.43
UBR4-210ENST00000466969 PHF10Q8WUB8 498 aaKnown RBP12.35□□□□□ -0.43
UBR4-210ENST00000466969 ZNF501Q96CX3 271 aaPredicted RBP12.35□□□□□ -0.43
UBR4-210ENST00000466969 COX4I2Q96KJ9 171 aa12.35□□□□□ -0.43
UBR4-210ENST00000466969 TUBGCP5Q96RT8 1024 aa12.35□□□□□ -0.43
UBR4-210ENST00000466969 C17orf62Q9BQA9 187 aa12.35□□□□□ -0.43
UBR4-210ENST00000466969 DPH2Q9BQC3 489 aaPredicted RBP12.35□□□□□ -0.43
UBR4-210ENST00000466969 RAB33BQ9H082 229 aa12.35□□□□□ -0.43
UBR4-210ENST00000466969 CLEC4MQ9H2X3 399 aaPredicted RBP12.35□□□□□ -0.43
UBR4-210ENST00000466969 NPDC1Q9NQX5 325 aaPredicted RBP12.35□□□□□ -0.43
UBR4-210ENST00000466969 ASNSD1Q9NWL6 643 aa12.35□□□□□ -0.43
UBR4-210ENST00000466969 SEMA5BQ9P283 1151 aa12.35□□□□□ -0.43
UBR4-210ENST00000466969 PTRH2Q9Y3E5 179 aaKnown RBP12.35□□□□□ -0.43
UBR4-210ENST00000466969 PRKAB1Q9Y478 270 aa12.35□□□□□ -0.43
UBR4-210ENST00000466969 SEC16AO15027 2179 aa12.35□□□□□ -0.43
UBR4-210ENST00000466969 GTF3C1Q12789 2109 aa12.34□□□□□ -0.43
UBR4-210ENST00000466969 TRAV17A0A0B4J275 112 aa12.34□□□□□ -0.43
UBR4-210ENST00000466969 RNF225M0QZC1 329 aaPredicted RBP12.34□□□□□ -0.43
UBR4-210ENST00000466969 AGPSO00116 658 aa12.34□□□□□ -0.43
UBR4-210ENST00000466969 RAMP2O60895 175 aa12.34□□□□□ -0.43
UBR4-210ENST00000466969 CRLF1O75462 422 aa12.34□□□□□ -0.43
UBR4-210ENST00000466969 RASAL1O95294 804 aa12.34□□□□□ -0.43
UBR4-210ENST00000466969 HOXD4P09016 255 aaPredicted RBP12.34□□□□□ -0.43
UBR4-210ENST00000466969 UNGP13051 313 aaPredicted RBP12.34□□□□□ -0.43
UBR4-210ENST00000466969 ACP5P13686 325 aa12.34□□□□□ -0.43
UBR4-210ENST00000466969 XRCC1P18887 633 aaPredicted RBP12.34□□□□□ -0.43
UBR4-210ENST00000466969 NR2F2P24468 414 aa12.34□□□□□ -0.43
UBR4-210ENST00000466969 PSMC2P35998 433 aaKnown RBP12.34□□□□□ -0.43
UBR4-210ENST00000466969 ETV3P41162 512 aa12.34□□□□□ -0.43
UBR4-210ENST00000466969 MAPKAPK2P49137 400 aa12.34□□□□□ -0.43
UBR4-210ENST00000466969 CEBPZQ03701 1054 aaKnown RBP12.34□□□□□ -0.43
UBR4-210ENST00000466969 LRMPQ12912 555 aa12.34□□□□□ -0.43
UBR4-210ENST00000466969 MLIPQ5VWP3 458 aa12.34□□□□□ -0.43
UBR4-210ENST00000466969 ISLR2Q6UXK2 745 aa12.34□□□□□ -0.43
UBR4-210ENST00000466969 CHSY3Q70JA7 882 aa12.34□□□□□ -0.43
UBR4-210ENST00000466969 BRAPQ7Z569 592 aa12.34□□□□□ -0.43
UBR4-210ENST00000466969 TRIM74Q86UV6 250 aa12.34□□□□□ -0.43
UBR4-210ENST00000466969 SPPL2CQ8IUH8 684 aa12.34□□□□□ -0.43
UBR4-210ENST00000466969 PHYKPLQ8IUZ5 450 aa12.34□□□□□ -0.43
UBR4-210ENST00000466969 EID3Q8N140 333 aa12.34□□□□□ -0.43
UBR4-210ENST00000466969 DTD2Q96FN9 168 aa12.34□□□□□ -0.43
UBR4-210ENST00000466969 ATP13A3Q9H7F0 1226 aa12.34□□□□□ -0.43
UBR4-210ENST00000466969 ACTR5Q9H9F9 607 aaPredicted RBP12.34□□□□□ -0.43
UBR4-210ENST00000466969 FANCEQ9HB96 536 aa12.34□□□□□ -0.43
UBR4-210ENST00000466969 LRFN1Q9P244 771 aa12.34□□□□□ -0.43
UBR4-210ENST00000466969 PPARGC1AQ9UBK2 798 aaKnown RBP12.34□□□□□ -0.43
UBR4-210ENST00000466969 GPN3Q9UHW5 284 aaPredicted RBP12.34□□□□□ -0.43
UBR4-210ENST00000466969 CLIC4Q9Y696 253 aa12.34□□□□□ -0.43
UBR4-210ENST00000466969 PVALEFA0A1B0GWK0 134 aa12.33□□□□□ -0.44
UBR4-210ENST00000466969 DYTNA2CJ06 578 aa12.33□□□□□ -0.44
UBR4-210ENST00000466969 HTRA2O43464 458 aaPredicted RBP12.33□□□□□ -0.44
UBR4-210ENST00000466969 MSX1P28360 303 aa12.33□□□□□ -0.44
UBR4-210ENST00000466969 MFAP5Q13361 173 aa12.33□□□□□ -0.44
UBR4-210ENST00000466969 FOXD4L6Q3SYB3 417 aaPredicted RBP12.33□□□□□ -0.44
UBR4-210ENST00000466969 SHEQ5VZ18 495 aa12.33□□□□□ -0.44
UBR4-210ENST00000466969 DENND1BQ6P3S1 775 aa12.33□□□□□ -0.44
UBR4-210ENST00000466969 FOXD4L3Q6VB84 417 aaPredicted RBP12.33□□□□□ -0.44
UBR4-210ENST00000466969 CENPQQ7L2Z9 268 aaPredicted RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms