RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 MRNIPQ6NTE8 343 aa15.83■□□□□ 0.12
GPC1-207ENST00000466624 PRR23CQ6ZRP0 262 aa15.83■□□□□ 0.12
GPC1-207ENST00000466624 ADGRG6Q86SQ4 1221 aa15.83■□□□□ 0.12
GPC1-207ENST00000466624 TRIM74Q86UV6 250 aa15.83■□□□□ 0.12
GPC1-207ENST00000466624 SERPINA9Q86WD7 417 aa15.83■□□□□ 0.12
GPC1-207ENST00000466624 ANKMY2Q8IV38 441 aa15.83■□□□□ 0.12
GPC1-207ENST00000466624 PIANPQ8IYJ0 282 aa15.83■□□□□ 0.12
GPC1-207ENST00000466624 GABPB2Q8TAK5 448 aaPredicted RBP15.83■□□□□ 0.12
GPC1-207ENST00000466624 GDAP1Q8TB36 358 aa15.83■□□□□ 0.12
GPC1-207ENST00000466624 CALML6Q8TD86 181 aa15.83■□□□□ 0.12
GPC1-207ENST00000466624 TCEAL3Q969E4 200 aa15.83■□□□□ 0.12
GPC1-207ENST00000466624 COPS8Q99627 209 aa15.83■□□□□ 0.12
GPC1-207ENST00000466624 PLAC1Q9HBJ0 212 aa15.83■□□□□ 0.12
GPC1-207ENST00000466624 PARD6AQ9NPB6 346 aa15.83■□□□□ 0.12
GPC1-207ENST00000466624 ZDHHC3Q9NYG2 299 aa15.83■□□□□ 0.12
GPC1-207ENST00000466624 ATXN10Q9UBB4 475 aa15.83■□□□□ 0.12
GPC1-207ENST00000466624 NFU1Q9UMS0 254 aa15.83■□□□□ 0.12
GPC1-207ENST00000466624 A0A1B0GTQ1 180 aa15.82■□□□□ 0.12
GPC1-207ENST00000466624 CFAP99D6REC4 459 aa15.82■□□□□ 0.12
GPC1-207ENST00000466624 H3BM21 787 aa15.82■□□□□ 0.12
GPC1-207ENST00000466624 CHUKO15111 745 aa15.82■□□□□ 0.12
GPC1-207ENST00000466624 NUAK1O60285 661 aa15.82■□□□□ 0.12
GPC1-207ENST00000466624 DNAJC6O75061 913 aa15.82■□□□□ 0.12
GPC1-207ENST00000466624 SPAG6O75602 509 aa15.82■□□□□ 0.12
GPC1-207ENST00000466624 ASMTLO95671 621 aa15.82■□□□□ 0.12
GPC1-207ENST00000466624 ZNF883P0CG24 379 aa15.82■□□□□ 0.12
GPC1-207ENST00000466624 RALBP11234 206 aa15.82■□□□□ 0.12
GPC1-207ENST00000466624 MAGEA4P43358 317 aa15.82■□□□□ 0.12
GPC1-207ENST00000466624 TTPAP49638 278 aa15.82■□□□□ 0.12
GPC1-207ENST00000466624 CDKN1CP49918 316 aaPredicted RBP15.82■□□□□ 0.12
GPC1-207ENST00000466624 HK3P52790 923 aa15.82■□□□□ 0.12
GPC1-207ENST00000466624 HNRNPKP61978 463 aaKnown RBP eCLIP15.82■□□□□ 0.12
GPC1-207ENST00000466624 TMEM115Q12893 351 aaPredicted RBP15.82■□□□□ 0.12
GPC1-207ENST00000466624 SF3A2Q15428 464 aaKnown RBP15.82■□□□□ 0.12
GPC1-207ENST00000466624 DBN1Q16643 649 aa15.82■□□□□ 0.12
GPC1-207ENST00000466624 TYSND1Q2T9J0 566 aa15.82■□□□□ 0.12
GPC1-207ENST00000466624 ALG11Q2TAA5 492 aa15.82■□□□□ 0.12
GPC1-207ENST00000466624 HP1BP3Q5SSJ5 553 aaPredicted RBP15.82■□□□□ 0.12
GPC1-207ENST00000466624 NEPROQ6NW34 567 aa15.82■□□□□ 0.12
GPC1-207ENST00000466624 ZNF449Q6P9G9 518 aa15.82■□□□□ 0.12
GPC1-207ENST00000466624 PACS1Q6VY07 963 aa15.82■□□□□ 0.12
GPC1-207ENST00000466624 CYS1Q717R9 158 aa15.82■□□□□ 0.12
GPC1-207ENST00000466624 TAS2R42Q7RTR8 314 aa15.82■□□□□ 0.12
GPC1-207ENST00000466624 KCNMB4Q86W47 210 aa15.82■□□□□ 0.12
GPC1-207ENST00000466624 CCDC25Q86WR0 208 aa15.82■□□□□ 0.12
GPC1-207ENST00000466624 PHACTR4Q8IZ21 702 aa15.82■□□□□ 0.12
GPC1-207ENST00000466624 GSDMBQ8TAX9 411 aa15.82■□□□□ 0.12
GPC1-207ENST00000466624 OR1E3Q8WZA6 343 aa15.82■□□□□ 0.12
GPC1-207ENST00000466624 CERS2Q96G23 380 aa15.82■□□□□ 0.12
GPC1-207ENST00000466624 CFAP36Q96G28 342 aa15.82■□□□□ 0.12
GPC1-207ENST00000466624 PDXPQ96GD0 296 aa15.82■□□□□ 0.12
GPC1-207ENST00000466624 ZNF514Q96K75 400 aaPredicted RBP15.82■□□□□ 0.12
GPC1-207ENST00000466624 TCF12Q99081 682 aa15.82■□□□□ 0.12
GPC1-207ENST00000466624 FAM167BQ9BTA0 163 aa15.82■□□□□ 0.12
GPC1-207ENST00000466624 FAM96AQ9H5X1 160 aa15.82■□□□□ 0.12
GPC1-207ENST00000466624 GAREM1Q9H706 876 aa15.82■□□□□ 0.12
GPC1-207ENST00000466624 RRAGDQ9NQL2 400 aaPredicted RBP15.82■□□□□ 0.12
GPC1-207ENST00000466624 C20orf96Q9NUD7 363 aaPredicted RBP15.82■□□□□ 0.12
GPC1-207ENST00000466624 DNAJC28Q9NX36 388 aa15.82■□□□□ 0.12
GPC1-207ENST00000466624 PNMA8BQ9ULN7 279 aaPredicted RBP15.82■□□□□ 0.12
GPC1-207ENST00000466624 TMEM98Q9Y2Y6 226 aa15.82■□□□□ 0.12
GPC1-207ENST00000466624 PFDN6O15212 129 aa15.81■□□□□ 0.12
GPC1-207ENST00000466624 CDK14O94921 469 aa15.81■□□□□ 0.12
GPC1-207ENST00000466624 TNFP01375 233 aa15.81■□□□□ 0.12
GPC1-207ENST00000466624 PRSS56P0CW18 603 aa15.81■□□□□ 0.12
GPC1-207ENST00000466624 MSH3P20585 1137 aa15.81■□□□□ 0.12
GPC1-207ENST00000466624 AKT1P31749 480 aa15.81■□□□□ 0.12
GPC1-207ENST00000466624 NSG1P42857 185 aa15.81■□□□□ 0.12
GPC1-207ENST00000466624 CCT8P50990 548 aa15.81■□□□□ 0.12
GPC1-207ENST00000466624 ATXN3P54252 364 aaPredicted RBP15.81■□□□□ 0.12
GPC1-207ENST00000466624 THOC5Q13769 683 aaKnown RBP15.81■□□□□ 0.12
GPC1-207ENST00000466624 GTF2H3Q13889 308 aa15.81■□□□□ 0.12
GPC1-207ENST00000466624 SLMAPQ14BN4 828 aa15.81■□□□□ 0.12
GPC1-207ENST00000466624 KHDC1Q4VXA5 237 aaKnown RBP15.81■□□□□ 0.12
GPC1-207ENST00000466624 RNF187Q5TA31 235 aaPredicted RBP15.81■□□□□ 0.12
GPC1-207ENST00000466624 DOK6Q6PKX4 331 aa15.81■□□□□ 0.12
GPC1-207ENST00000466624 SDCCAG8Q86SQ7 713 aaPredicted RBP15.81■□□□□ 0.12
GPC1-207ENST00000466624 CNTN4Q8IWV2 1026 aa15.81■□□□□ 0.12
GPC1-207ENST00000466624 PALM2Q8IXS6 379 aa15.81■□□□□ 0.12
GPC1-207ENST00000466624 DCLK2Q8N568 766 aa15.81■□□□□ 0.12
GPC1-207ENST00000466624 MINDY1Q8N5J2 469 aa15.81■□□□□ 0.12
GPC1-207ENST00000466624 TTC25Q96NG3 672 aa15.81■□□□□ 0.12
GPC1-207ENST00000466624 OR2AG1Q9H205 316 aa15.81■□□□□ 0.12
GPC1-207ENST00000466624 FSCN3Q9NQT6 498 aa15.81■□□□□ 0.12
GPC1-207ENST00000466624 DNAAF2Q9NVR5 837 aaKnown RBP15.81■□□□□ 0.12
GPC1-207ENST00000466624 TRNAU1APQ9NX07 287 aaKnown RBP15.81■□□□□ 0.12
GPC1-207ENST00000466624 MOCS1Q9NZB8 636 aa15.81■□□□□ 0.12
GPC1-207ENST00000466624 MARCH4Q9P2E8 410 aaPredicted RBP15.81■□□□□ 0.12
GPC1-207ENST00000466624 APOBEC3BQ9UH17 382 aaKnown RBP15.81■□□□□ 0.12
GPC1-207ENST00000466624 KLF15Q9UIH9 416 aa15.81■□□□□ 0.12
GPC1-207ENST00000466624 SUFUQ9UMX1 484 aa15.81■□□□□ 0.12
GPC1-207ENST00000466624 GPR34Q9UPC5 381 aa15.81■□□□□ 0.12
GPC1-207ENST00000466624 VPS9D1Q9Y2B5 631 aa15.81■□□□□ 0.12
GPC1-207ENST00000466624 EP300Q09472 2414 aaPredicted RBP15.8■□□□□ 0.12
GPC1-207ENST00000466624 CABIN1Q9Y6J0 2220 aa15.8■□□□□ 0.12
GPC1-207ENST00000466624 QSOX1O00391 747 aa15.8■□□□□ 0.12
GPC1-207ENST00000466624 MTX2O75431 263 aa15.8■□□□□ 0.12
GPC1-207ENST00000466624 AP2A2O94973 939 aa15.8■□□□□ 0.12
GPC1-207ENST00000466624 FUCA1P04066 466 aa15.8■□□□□ 0.12
GPC1-207ENST00000466624 ZNF8P17098 575 aaPredicted RBP15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms