RNA–Protein interactions for RNA: ENST00000465950.5

SCAF11-205, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 5,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-205ENST00000465950 PRODH2Q9UF12 536 aa9.38□□□□□ -0.91
SCAF11-205ENST00000465950 NCANO14594 1321 aa9.38□□□□□ -0.91
SCAF11-205ENST00000465950 PPEF2O14830 753 aa9.38□□□□□ -0.91
SCAF11-205ENST00000465950 MDM4O15151 490 aa9.38□□□□□ -0.91
SCAF11-205ENST00000465950 NT5EP21589 574 aa9.38□□□□□ -0.91
SCAF11-205ENST00000465950 KDELR1P24390 212 aa9.38□□□□□ -0.91
SCAF11-205ENST00000465950 MAGEA4P43358 317 aa9.38□□□□□ -0.91
SCAF11-205ENST00000465950 CATSPER1Q8NEC5 780 aa9.38□□□□□ -0.91
SCAF11-205ENST00000465950 ADAMTS15Q8TE58 950 aa9.38□□□□□ -0.91
SCAF11-205ENST00000465950 RNF157Q96PX1 679 aa9.38□□□□□ -0.91
SCAF11-205ENST00000465950 CCT7Q99832 543 aa9.38□□□□□ -0.91
SCAF11-205ENST00000465950 SLC17A9Q9BYT1 436 aa9.38□□□□□ -0.91
SCAF11-205ENST00000465950 PRDM8Q9NQV8 689 aa9.38□□□□□ -0.91
SCAF11-205ENST00000465950 THUMPD1Q9NXG2 353 aaKnown RBP9.38□□□□□ -0.91
SCAF11-205ENST00000465950 OR2AG2A6NM03 316 aa9.38□□□□□ -0.91
SCAF11-205ENST00000465950 HAS3O00219 553 aa9.38□□□□□ -0.91
SCAF11-205ENST00000465950 CD3EAPO15446 510 aaKnown RBP9.38□□□□□ -0.91
SCAF11-205ENST00000465950 KDELR3O43731 214 aa9.38□□□□□ -0.91
SCAF11-205ENST00000465950 KRT8P05787 483 aa9.38□□□□□ -0.91
SCAF11-205ENST00000465950 CDH5P33151 784 aaPredicted RBP9.38□□□□□ -0.91
SCAF11-205ENST00000465950 COILP38432 576 aaPredicted RBP9.38□□□□□ -0.91
SCAF11-205ENST00000465950 SLC7A9P82251 487 aa9.38□□□□□ -0.91
SCAF11-205ENST00000465950 PRR5P85299 388 aa9.38□□□□□ -0.91
SCAF11-205ENST00000465950 PTGES3Q15185 160 aaKnown RBP9.38□□□□□ -0.91
SCAF11-205ENST00000465950 PGS1Q32NB8 556 aa9.38□□□□□ -0.91
SCAF11-205ENST00000465950 INO80DQ53TQ3 878 aaPredicted RBP9.38□□□□□ -0.91
SCAF11-205ENST00000465950 RHBDF2Q6PJF5 856 aa9.38□□□□□ -0.91
SCAF11-205ENST00000465950 FAM180AQ6UWF9 173 aa9.38□□□□□ -0.91
SCAF11-205ENST00000465950 OR5B17Q8NGF7 314 aa9.38□□□□□ -0.91
SCAF11-205ENST00000465950 ZNF607Q96SK3 696 aa9.38□□□□□ -0.91
SCAF11-205ENST00000465950 GAREM1Q9H706 876 aa9.38□□□□□ -0.91
SCAF11-205ENST00000465950 BLOC1S4Q9NUP1 217 aa9.38□□□□□ -0.91
SCAF11-205ENST00000465950 WHRNQ9P202 907 aa9.38□□□□□ -0.91
SCAF11-205ENST00000465950 SLC9A8Q9Y2E8 581 aa9.38□□□□□ -0.91
SCAF11-205ENST00000465950 BLACEA4D250 179 aa9.38□□□□□ -0.91
SCAF11-205ENST00000465950 CCNHP51946 323 aaPredicted RBP9.38□□□□□ -0.91
SCAF11-205ENST00000465950 DIO3P55073 304 aa9.38□□□□□ -0.91
SCAF11-205ENST00000465950 FCHO2Q0JRZ9 810 aa9.38□□□□□ -0.91
SCAF11-205ENST00000465950 RASA2Q15283 850 aa9.38□□□□□ -0.91
SCAF11-205ENST00000465950 PRMT9Q6P2P2 845 aa9.38□□□□□ -0.91
SCAF11-205ENST00000465950 KDM1BQ8NB78 822 aa9.38□□□□□ -0.91
SCAF11-205ENST00000465950 TMEM178AQ8NBL3 297 aa9.38□□□□□ -0.91
SCAF11-205ENST00000465950 OR52L1Q8NGH7 329 aa9.38□□□□□ -0.91
SCAF11-205ENST00000465950 OR8K5Q8NH50 307 aa9.38□□□□□ -0.91
SCAF11-205ENST00000465950 ZDHHC1Q8WTX9 485 aa9.38□□□□□ -0.91
SCAF11-205ENST00000465950 C1orf74Q96LT6 269 aa9.38□□□□□ -0.91
SCAF11-205ENST00000465950 OSBPL10Q9BXB5 764 aa9.38□□□□□ -0.91
SCAF11-205ENST00000465950 OR2AG1Q9H205 316 aa9.38□□□□□ -0.91
SCAF11-205ENST00000465950 MIOSQ9NXC5 875 aa9.38□□□□□ -0.91
SCAF11-205ENST00000465950 TRBV23OR9-2A0A075B6M9 112 aa9.37□□□□□ -0.91
SCAF11-205ENST00000465950 MYADML2A6NDP7 307 aa9.37□□□□□ -0.91
SCAF11-205ENST00000465950 VAPBO95292 243 aa9.37□□□□□ -0.91
SCAF11-205ENST00000465950 CXCL10P02778 98 aa9.37□□□□□ -0.91
SCAF11-205ENST00000465950 LTA4HP09960 611 aaKnown RBP9.37□□□□□ -0.91
SCAF11-205ENST00000465950 TSPAN8P19075 237 aa9.37□□□□□ -0.91
SCAF11-205ENST00000465950 CPN2P22792 545 aa9.37□□□□□ -0.91
SCAF11-205ENST00000465950 IRS1P35568 1242 aa9.37□□□□□ -0.91
SCAF11-205ENST00000465950 MED27Q6P2C8 311 aa9.37□□□□□ -0.91
SCAF11-205ENST00000465950 NSMCE3Q96MG7 304 aa9.37□□□□□ -0.91
SCAF11-205ENST00000465950 PSKH2Q96QS6 385 aa9.37□□□□□ -0.91
SCAF11-205ENST00000465950 RTKNQ9BST9 563 aa9.37□□□□□ -0.91
SCAF11-205ENST00000465950 HGH1Q9BTY7 390 aa9.37□□□□□ -0.91
SCAF11-205ENST00000465950 EFCAB11Q9BUY7 163 aa9.37□□□□□ -0.91
SCAF11-205ENST00000465950 CCDC86Q9H6F5 360 aaKnown RBP9.37□□□□□ -0.91
SCAF11-205ENST00000465950 TIMMDC1Q9NPL8 285 aa9.37□□□□□ -0.91
SCAF11-205ENST00000465950 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.37□□□□□ -0.91
SCAF11-205ENST00000465950 GRXCR1A8MXD5 290 aa9.37□□□□□ -0.91
SCAF11-205ENST00000465950 FAM155AB1AL88 458 aaPredicted RBP9.37□□□□□ -0.91
SCAF11-205ENST00000465950 E7EQ34 232 aa9.37□□□□□ -0.91
SCAF11-205ENST00000465950 AGRPO00253 132 aa9.37□□□□□ -0.91
SCAF11-205ENST00000465950 PMM2O15305 246 aa9.37□□□□□ -0.91
SCAF11-205ENST00000465950 SEC22BO75396 215 aa9.37□□□□□ -0.91
SCAF11-205ENST00000465950 CPSF4O95639 269 aaKnown RBP9.37□□□□□ -0.91
SCAF11-205ENST00000465950 GJA1P17302 382 aa9.37□□□□□ -0.91
SCAF11-205ENST00000465950 VSNL1P62760 191 aa9.37□□□□□ -0.91
SCAF11-205ENST00000465950 NR1D2Q14995 579 aa9.37□□□□□ -0.91
SCAF11-205ENST00000465950 LARS2Q15031 903 aaKnown RBP9.37□□□□□ -0.91
SCAF11-205ENST00000465950 TMEM198Q66K66 360 aa9.37□□□□□ -0.91
SCAF11-205ENST00000465950 LCA5Q86VQ0 697 aa9.37□□□□□ -0.91
SCAF11-205ENST00000465950 COMMD2Q86X83 199 aa9.37□□□□□ -0.91
SCAF11-205ENST00000465950 DCUN1D3Q8IWE4 304 aa9.37□□□□□ -0.91
SCAF11-205ENST00000465950 FAM71AQ8IYT1 594 aa9.37□□□□□ -0.91
SCAF11-205ENST00000465950 ZNF555Q8NEP9 628 aa9.37□□□□□ -0.91
SCAF11-205ENST00000465950 ACTL9Q8TC94 416 aa9.37□□□□□ -0.91
SCAF11-205ENST00000465950 RMDN2Q96LZ7 410 aa9.37□□□□□ -0.91
SCAF11-205ENST00000465950 LTB4R2Q9NPC1 389 aa9.37□□□□□ -0.91
SCAF11-205ENST00000465950 PAPOLBQ9NRJ5 636 aaKnown RBP9.37□□□□□ -0.91
SCAF11-205ENST00000465950 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.37□□□□□ -0.913e-7■■■□□ 15.3
SCAF11-205ENST00000465950 PNMA8BQ9ULN7 279 aaPredicted RBP9.37□□□□□ -0.91
SCAF11-205ENST00000465950 FZD4Q9ULV1 537 aa9.37□□□□□ -0.91
SCAF11-205ENST00000465950 A0A1W2PP55 124 aa9.37□□□□□ -0.91
SCAF11-205ENST00000465950 GMNCA6NCL1 334 aa9.37□□□□□ -0.91
SCAF11-205ENST00000465950 MSI1O43347 362 aaKnown RBP9.37□□□□□ -0.91
SCAF11-205ENST00000465950 ADRB2P07550 413 aa9.37□□□□□ -0.91
SCAF11-205ENST00000465950 C1SP09871 688 aa9.37□□□□□ -0.91
SCAF11-205ENST00000465950 SEMA3AQ14563 771 aa9.37□□□□□ -0.91
SCAF11-205ENST00000465950 KCNT1Q5JUK3 1230 aa9.37□□□□□ -0.91
SCAF11-205ENST00000465950 TMEM63BQ5T3F8 832 aa9.37□□□□□ -0.91
SCAF11-205ENST00000465950 SLC26A11Q86WA9 606 aa9.37□□□□□ -0.91
SCAF11-205ENST00000465950 HEATR4Q86WZ0 1026 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms