RNA–Protein interactions for RNA: ENST00000465563.5

SMC4-205, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-205ENST00000465563 TAF12Q16514 161 aa4.6□□□□□ -1.67
SMC4-205ENST00000465563 LONP2Q86WA8 852 aa4.6□□□□□ -1.67
SMC4-205ENST00000465563 MAELQ96JY0 434 aaKnown RBP4.6□□□□□ -1.67
SMC4-205ENST00000465563 CDK19Q9BWU1 502 aa4.6□□□□□ -1.67
SMC4-205ENST00000465563 PRKRIP1Q9H875 184 aaPredicted RBP4.6□□□□□ -1.67
SMC4-205ENST00000465563 KIF9Q9HAQ2 790 aa4.6□□□□□ -1.67
SMC4-205ENST00000465563 SLC28A3Q9HAS3 691 aa4.6□□□□□ -1.67
SMC4-205ENST00000465563 TBX20Q9UMR3 447 aa4.6□□□□□ -1.67
SMC4-205ENST00000465563 MRPS28Q9Y2Q9 187 aaKnown RBP4.6□□□□□ -1.67
SMC4-205ENST00000465563 A0A0G2JNG1 304 aa4.59□□□□□ -1.67
SMC4-205ENST00000465563 FAM237AA0A1B0GTK4 181 aa4.59□□□□□ -1.67
SMC4-205ENST00000465563 TMEM178BH3BS89 294 aa4.59□□□□□ -1.67
SMC4-205ENST00000465563 ZNF182P17025 639 aaPredicted RBP4.59□□□□□ -1.67
SMC4-205ENST00000465563 TLE2Q04725 743 aa4.59□□□□□ -1.67
SMC4-205ENST00000465563 NEXNQ0ZGT2 675 aa4.59□□□□□ -1.67
SMC4-205ENST00000465563 GALNT2Q10471 571 aa4.59□□□□□ -1.67
SMC4-205ENST00000465563 DCTN2Q13561 401 aaKnown RBP4.59□□□□□ -1.67
SMC4-205ENST00000465563 KIR2DS5Q14953 304 aa4.59□□□□□ -1.67
SMC4-205ENST00000465563 GRAMD1BQ3KR37 738 aa4.59□□□□□ -1.67
SMC4-205ENST00000465563 KIAA1644Q3SXP7 199 aa4.59□□□□□ -1.67
SMC4-205ENST00000465563 ASPRV1Q53RT3 343 aa4.59□□□□□ -1.67
SMC4-205ENST00000465563 PLXDC2Q6UX71 529 aa4.59□□□□□ -1.67
SMC4-205ENST00000465563 SH2D6Q7Z4S9 175 aa4.59□□□□□ -1.67
SMC4-205ENST00000465563 UTP15Q8TED0 518 aaKnown RBP4.59□□□□□ -1.67
SMC4-205ENST00000465563 RRNAD1Q96FB5 475 aaKnown RBP4.59□□□□□ -1.67
SMC4-205ENST00000465563 POM121L2Q96KW2 1035 aa4.59□□□□□ -1.67
SMC4-205ENST00000465563 ARPC5LQ9BPX5 153 aa4.59□□□□□ -1.67
SMC4-205ENST00000465563 TRPC7Q9HCX4 862 aa4.59□□□□□ -1.67
SMC4-205ENST00000465563 CACNG5Q9UF02 275 aa4.59□□□□□ -1.67
SMC4-205ENST00000465563 OR14J1Q9UGF5 321 aa4.59□□□□□ -1.67
SMC4-205ENST00000465563 RASAL2Q9UJF2 1139 aa4.59□□□□□ -1.67
SMC4-205ENST00000465563 KIAA1210Q9ULL0 1709 aa4.59□□□□□ -1.67
SMC4-205ENST00000465563 HNRNPA1P09651 372 aaKnown RBP eCLIP4.58□□□□□ -1.68
SMC4-205ENST00000465563 PLA2G4BP0C869 781 aa4.58□□□□□ -1.68
SMC4-205ENST00000465563 IGHV4-38-2P0DP08 117 aa4.58□□□□□ -1.68
SMC4-205ENST00000465563 GNAZP19086 355 aa4.58□□□□□ -1.68
SMC4-205ENST00000465563 HALP42357 657 aa4.58□□□□□ -1.68
SMC4-205ENST00000465563 VAMP2P63027 116 aa4.58□□□□□ -1.68
SMC4-205ENST00000465563 TUBB2AQ13885 445 aa4.58□□□□□ -1.68
SMC4-205ENST00000465563 GSTA5Q7RTV2 222 aa4.58□□□□□ -1.68
SMC4-205ENST00000465563 ZNF440Q8IYI8 595 aa4.58□□□□□ -1.68
SMC4-205ENST00000465563 OR14L1PQ8NHC6 308 aa4.58□□□□□ -1.68
SMC4-205ENST00000465563 GTF3C6Q969F1 213 aa4.58□□□□□ -1.68
SMC4-205ENST00000465563 OXNAD1Q96HP4 312 aaPredicted RBP4.58□□□□□ -1.68
SMC4-205ENST00000465563 TMEM68Q96MH6 324 aa4.58□□□□□ -1.68
SMC4-205ENST00000465563 RPS6KC1Q96S38 1066 aa4.58□□□□□ -1.68
SMC4-205ENST00000465563 PSD2Q9BQI7 771 aa4.58□□□□□ -1.68
SMC4-205ENST00000465563 HERPUD2Q9BSE4 406 aa4.58□□□□□ -1.68
SMC4-205ENST00000465563 TUBB2BQ9BVA1 445 aa4.58□□□□□ -1.68
SMC4-205ENST00000465563 SIL1Q9H173 461 aa4.58□□□□□ -1.68
SMC4-205ENST00000465563 KLHL9Q9P2J3 617 aa4.58□□□□□ -1.68
SMC4-205ENST00000465563 SARDHQ9UL12 918 aa4.58□□□□□ -1.68
SMC4-205ENST00000465563 PRAG1Q86YV5 1406 aa4.57□□□□□ -1.68
SMC4-205ENST00000465563 DISP3Q9P2K9 1392 aa4.57□□□□□ -1.68
SMC4-205ENST00000465563 TFAP2AP05549 437 aa4.57□□□□□ -1.68
SMC4-205ENST00000465563 CEACAM1P13688 526 aa4.57□□□□□ -1.68
SMC4-205ENST00000465563 DPEP1P16444 411 aa4.57□□□□□ -1.68
SMC4-205ENST00000465563 PAFAH1B1P43034 410 aa4.57□□□□□ -1.68
SMC4-205ENST00000465563 PIP4K2AP48426 406 aaPredicted RBP4.57□□□□□ -1.68
SMC4-205ENST00000465563 CTCFP49711 727 aaPredicted RBP4.57□□□□□ -1.68
SMC4-205ENST00000465563 TBX2Q13207 712 aaPredicted RBP4.57□□□□□ -1.68
SMC4-205ENST00000465563 BIRC2Q13490 618 aa4.57□□□□□ -1.68
SMC4-205ENST00000465563 OLIG2Q13516 323 aa4.57□□□□□ -1.68
SMC4-205ENST00000465563 BAK1Q16611 211 aa4.57□□□□□ -1.68
SMC4-205ENST00000465563 TCTE1Q5JU00 501 aa4.57□□□□□ -1.68
SMC4-205ENST00000465563 PACS1Q6VY07 963 aa4.57□□□□□ -1.68
SMC4-205ENST00000465563 Q75L30 129 aa4.57□□□□□ -1.68
SMC4-205ENST00000465563 SLC7A10Q9NS82 523 aa4.57□□□□□ -1.68
SMC4-205ENST00000465563 BARHL2Q9NY43 387 aa4.57□□□□□ -1.68
SMC4-205ENST00000465563 H7C423 109 aa4.56□□□□□ -1.68
SMC4-205ENST00000465563 PIP5K1CO60331 668 aa4.56□□□□□ -1.68
SMC4-205ENST00000465563 SORBS2O94875 1100 aaKnown RBP4.56□□□□□ -1.68
SMC4-205ENST00000465563 IL7RP16871 459 aa4.56□□□□□ -1.68
SMC4-205ENST00000465563 PRICKLE4Q2TBC4 344 aa4.56□□□□□ -1.68
SMC4-205ENST00000465563 LCN10Q6JVE6 187 aa4.56□□□□□ -1.68
SMC4-205ENST00000465563 MFSD6Q6ZSS7 791 aa4.56□□□□□ -1.68
SMC4-205ENST00000465563 SH2D5Q6ZV89 423 aa4.56□□□□□ -1.68
SMC4-205ENST00000465563 PSPC1Q8WXF1 523 aaKnown RBP4.56□□□□□ -1.68
SMC4-205ENST00000465563 SAAL1Q96ER3 474 aa4.56□□□□□ -1.68
SMC4-205ENST00000465563 PRMT6Q96LA8 375 aaPredicted RBP4.56□□□□□ -1.68
SMC4-205ENST00000465563 RANBP17Q9H2T7 1088 aaKnown RBP4.56□□□□□ -1.68
SMC4-205ENST00000465563 APOBEC3GQ9HC16 384 aaKnown RBP4.56□□□□□ -1.68
SMC4-205ENST00000465563 SLC38A7Q9NVC3 462 aa4.56□□□□□ -1.68
SMC4-205ENST00000465563 STK39Q9UEW8 545 aa4.56□□□□□ -1.68
SMC4-205ENST00000465563 INTS6Q9UL03 887 aaKnown RBP4.56□□□□□ -1.68
SMC4-205ENST00000465563 KCNJ14Q9UNX9 436 aa4.56□□□□□ -1.68
SMC4-205ENST00000465563 AZU1P20160 251 aa4.55□□□□□ -1.68
SMC4-205ENST00000465563 CNTFP26441 200 aa4.55□□□□□ -1.68
SMC4-205ENST00000465563 MRPS5P82675 430 aaKnown RBP4.55□□□□□ -1.68
SMC4-205ENST00000465563 PTP4A2Q12974 167 aa4.55□□□□□ -1.68
SMC4-205ENST00000465563 TRPC3Q13507 836 aa4.55□□□□□ -1.68
SMC4-205ENST00000465563 PDE1CQ14123 709 aaPredicted RBP4.55□□□□□ -1.68
SMC4-205ENST00000465563 DUOXA1Q1HG43 343 aa4.55□□□□□ -1.68
SMC4-205ENST00000465563 CXorf66Q5JRM2 361 aaPredicted RBP4.55□□□□□ -1.68
SMC4-205ENST00000465563 SPINK14Q6IE38 97 aa4.55□□□□□ -1.68
SMC4-205ENST00000465563 METTL7BQ6UX53 244 aa4.55□□□□□ -1.68
SMC4-205ENST00000465563 ATG9AQ7Z3C6 839 aa4.55□□□□□ -1.68
SMC4-205ENST00000465563 GBGT1Q8N5D6 347 aa4.55□□□□□ -1.68
SMC4-205ENST00000465563 TRIM51Q9BSJ1 452 aa4.55□□□□□ -1.68
SMC4-205ENST00000465563 MCRIP2Q9BUT9 160 aaKnown RBP4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms