RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 RABIFP47224 123 aa17.32■□□□□ 0.36
CPSF4-209ENST00000465132 SPINT3P49223 89 aa17.32■□□□□ 0.36
CPSF4-209ENST00000465132 DPTQ07507 201 aa17.32■□□□□ 0.36
CPSF4-209ENST00000465132 TEX35Q5T0J7 233 aa17.32■□□□□ 0.36
CPSF4-209ENST00000465132 FAM182AQ5T1J6 154 aa17.32■□□□□ 0.36
CPSF4-209ENST00000465132 PARGQ86W56 976 aa17.32■□□□□ 0.36
CPSF4-209ENST00000465132 ART4Q93070 314 aa17.32■□□□□ 0.36
CPSF4-209ENST00000465132 DTD2Q96FN9 168 aa17.32■□□□□ 0.36
CPSF4-209ENST00000465132 HIC2Q96JB3 615 aa17.32■□□□□ 0.36
CPSF4-209ENST00000465132 COQ10AQ96MF6 247 aa17.32■□□□□ 0.36
CPSF4-209ENST00000465132 KLF6Q99612 283 aaPredicted RBP17.32■□□□□ 0.36
CPSF4-209ENST00000465132 TTC1Q99614 292 aa17.32■□□□□ 0.36
CPSF4-209ENST00000465132 ZSCAN5AQ9BUG6 496 aa17.32■□□□□ 0.36
CPSF4-209ENST00000465132 ABCG4Q9H172 646 aa17.32■□□□□ 0.36
CPSF4-209ENST00000465132 EVA1BQ9NVM1 165 aa17.32■□□□□ 0.36
CPSF4-209ENST00000465132 CSNK1G3Q9Y6M4 447 aa17.32■□□□□ 0.36
CPSF4-209ENST00000465132 TEX51A0A1B0GUA7 166 aa17.31■□□□□ 0.36
CPSF4-209ENST00000465132 H3BM21 787 aa17.31■□□□□ 0.36
CPSF4-209ENST00000465132 GOLGA8MH3BSY2 632 aa17.31■□□□□ 0.36
CPSF4-209ENST00000465132 PFDN6O15212 129 aa17.31■□□□□ 0.36
CPSF4-209ENST00000465132 SPINT1O43278 529 aa17.31■□□□□ 0.36
CPSF4-209ENST00000465132 DXOO77932 396 aaKnown RBP17.31■□□□□ 0.36
CPSF4-209ENST00000465132 TMEM63AO94886 807 aa17.31■□□□□ 0.36
CPSF4-209ENST00000465132 POLBP06746 335 aa17.31■□□□□ 0.36
CPSF4-209ENST00000465132 PIRTP0C851 137 aa17.31■□□□□ 0.36
CPSF4-209ENST00000465132 TSHRP16473 764 aa17.31■□□□□ 0.36
CPSF4-209ENST00000465132 TPH1P17752 444 aa17.31■□□□□ 0.36
CPSF4-209ENST00000465132 TEAD1P28347 426 aa17.31■□□□□ 0.36
CPSF4-209ENST00000465132 PPARGP37231 505 aaPredicted RBP17.31■□□□□ 0.36
CPSF4-209ENST00000465132 SPAM1P38567 509 aa17.31■□□□□ 0.36
CPSF4-209ENST00000465132 PLTPP55058 493 aa17.31■□□□□ 0.36
CPSF4-209ENST00000465132 PCBP4P57723 403 aaKnown RBP17.31■□□□□ 0.36
CPSF4-209ENST00000465132 GABREP78334 506 aa17.31■□□□□ 0.36
CPSF4-209ENST00000465132 SLC7A5Q01650 507 aa17.31■□□□□ 0.36
CPSF4-209ENST00000465132 ITGA9Q13797 1035 aa17.31■□□□□ 0.36
CPSF4-209ENST00000465132 HLTFQ14527 1009 aaKnown RBP eCLIP17.31■□□□□ 0.36
CPSF4-209ENST00000465132 CDKN3Q16667 212 aa17.31■□□□□ 0.36
CPSF4-209ENST00000465132 ANKRD22Q5VYY1 191 aa17.31■□□□□ 0.36
CPSF4-209ENST00000465132 ZCCHC8Q6NZY4 707 aaKnown RBP17.31■□□□□ 0.36
CPSF4-209ENST00000465132 LSMEM2Q8N112 164 aa17.31■□□□□ 0.36
CPSF4-209ENST00000465132 ZNF248Q8NDW4 579 aa17.31■□□□□ 0.36
CPSF4-209ENST00000465132 IFI44Q8TCB0 444 aa17.31■□□□□ 0.36
CPSF4-209ENST00000465132 MAPK15Q8TD08 544 aa17.31■□□□□ 0.36
CPSF4-209ENST00000465132 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.31■□□□□ 0.36
CPSF4-209ENST00000465132 AP2M1Q96CW1 435 aa17.31■□□□□ 0.36
CPSF4-209ENST00000465132 POLR1BQ9H9Y6 1135 aa17.31■□□□□ 0.36
CPSF4-209ENST00000465132 IL17CQ9P0M4 197 aa17.31■□□□□ 0.36
CPSF4-209ENST00000465132 KLF15Q9UIH9 416 aa17.31■□□□□ 0.36
CPSF4-209ENST00000465132 GGT7Q9UJ14 662 aa17.31■□□□□ 0.36
CPSF4-209ENST00000465132 TCAF1Q9Y4C2 921 aa17.31■□□□□ 0.36
CPSF4-209ENST00000465132 SPO11Q9Y5K1 396 aa17.31■□□□□ 0.36
CPSF4-209ENST00000465132 GCN1Q92616 2671 aaKnown RBP17.31■□□□□ 0.36
CPSF4-209ENST00000465132 TCRBV7S3A2A0A539 114 aa17.3■□□□□ 0.36
CPSF4-209ENST00000465132 MROH6A6NGR9 719 aa17.3■□□□□ 0.36
CPSF4-209ENST00000465132 SLC4A1P02730 911 aa17.3■□□□□ 0.36
CPSF4-209ENST00000465132 RHOXF2BP0C7M4 288 aa17.3■□□□□ 0.36
CPSF4-209ENST00000465132 KELP23276 732 aa17.3■□□□□ 0.36
CPSF4-209ENST00000465132 MGAT1P26572 445 aa17.3■□□□□ 0.36
CPSF4-209ENST00000465132 LSSP48449 732 aa17.3■□□□□ 0.36
CPSF4-209ENST00000465132 YPEL5P62699 121 aa17.3■□□□□ 0.36
CPSF4-209ENST00000465132 CXADRP78310 365 aa17.3■□□□□ 0.36
CPSF4-209ENST00000465132 CBLBQ13191 982 aa17.3■□□□□ 0.36
CPSF4-209ENST00000465132 MTM1Q13496 603 aa17.3■□□□□ 0.36
CPSF4-209ENST00000465132 PDE1CQ14123 709 aaPredicted RBP17.3■□□□□ 0.36
CPSF4-209ENST00000465132 TPRG1LQ5T0D9 272 aa17.3■□□□□ 0.36
CPSF4-209ENST00000465132 CERCAMQ5T4B2 595 aa17.3■□□□□ 0.36
CPSF4-209ENST00000465132 TECPR1Q7Z6L1 1165 aa17.3■□□□□ 0.36
CPSF4-209ENST00000465132 TSPAN33Q86UF1 283 aa17.3■□□□□ 0.36
CPSF4-209ENST00000465132 CAND1Q86VP6 1230 aaKnown RBP17.3■□□□□ 0.36
CPSF4-209ENST00000465132 TTC30BQ8N4P2 665 aa17.3■□□□□ 0.36
CPSF4-209ENST00000465132 IFT81Q8WYA0 676 aa17.3■□□□□ 0.36
CPSF4-209ENST00000465132 RHOXF2Q9BQY4 288 aa17.3■□□□□ 0.36
CPSF4-209ENST00000465132 KIFC1Q9BW19 673 aa17.3■□□□□ 0.36
CPSF4-209ENST00000465132 NLE1Q9NVX2 485 aaPredicted RBP17.3■□□□□ 0.36
CPSF4-209ENST00000465132 NCKIPSDQ9NZQ3 722 aa17.3■□□□□ 0.36
CPSF4-209ENST00000465132 SOX13Q9UN79 622 aa17.3■□□□□ 0.36
CPSF4-209ENST00000465132 MAD1L1Q9Y6D9 718 aa17.3■□□□□ 0.36
CPSF4-209ENST00000465132 LRRK1Q38SD2 2015 aa17.3■□□□□ 0.36
CPSF4-209ENST00000465132 FAM237BA0A1B0GVD1 139 aa17.29■□□□□ 0.36
CPSF4-209ENST00000465132 AQP9O43315 295 aa17.29■□□□□ 0.36
CPSF4-209ENST00000465132 LDB2O43679 373 aa17.29■□□□□ 0.36
CPSF4-209ENST00000465132 JUNDP17535 347 aa17.29■□□□□ 0.36
CPSF4-209ENST00000465132 HTR1BP28222 390 aa17.29■□□□□ 0.36
CPSF4-209ENST00000465132 ETV3P41162 512 aa17.29■□□□□ 0.36
CPSF4-209ENST00000465132 GRIA1P42261 906 aa17.29■□□□□ 0.36
CPSF4-209ENST00000465132 MAGEA3P43357 314 aa17.29■□□□□ 0.36
CPSF4-209ENST00000465132 ERVPABLB-1P60509 514 aa17.29■□□□□ 0.36
CPSF4-209ENST00000465132 PFN3P60673 137 aa17.29■□□□□ 0.36
CPSF4-209ENST00000465132 PRAMEP78395 509 aa17.29■□□□□ 0.36
CPSF4-209ENST00000465132 MRPS25P82663 173 aaKnown RBP17.29■□□□□ 0.36
CPSF4-209ENST00000465132 OLIG2Q13516 323 aa17.29■□□□□ 0.36
CPSF4-209ENST00000465132 PTK2BQ14289 1009 aa17.29■□□□□ 0.36
CPSF4-209ENST00000465132 TSTD2Q5T7W7 516 aa17.29■□□□□ 0.36
CPSF4-209ENST00000465132 ESRP1Q6NXG1 681 aaKnown RBP17.29■□□□□ 0.36
CPSF4-209ENST00000465132 Q6ZVL8 140 aa17.29■□□□□ 0.36
CPSF4-209ENST00000465132 ZNF534Q76KX8 674 aa17.29■□□□□ 0.36
CPSF4-209ENST00000465132 HSD11B1LQ7Z5J1 315 aa17.29■□□□□ 0.36
CPSF4-209ENST00000465132 TRAM1L1Q8N609 369 aa17.29■□□□□ 0.36
CPSF4-209ENST00000465132 OR4K2Q8NGD2 314 aa17.29■□□□□ 0.36
CPSF4-209ENST00000465132 STAMBPL1Q96FJ0 436 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms