RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 GPRC6AQ5T6X5 926 aa17.48■□□□□ 0.39
VPS52-214ENST00000463486 C11orf96Q7Z7L8 435 aa17.48■□□□□ 0.39
VPS52-214ENST00000463486 GALNT13Q8IUC8 556 aa17.48■□□□□ 0.39
VPS52-214ENST00000463486 CCDC97Q96F63 343 aaPredicted RBP17.48■□□□□ 0.39
VPS52-214ENST00000463486 RANBP9Q96S59 729 aa17.48■□□□□ 0.39
VPS52-214ENST00000463486 SIRPGQ9P1W8 387 aa17.48■□□□□ 0.39
VPS52-214ENST00000463486 ZNHIT2Q9UHR6 403 aa17.48■□□□□ 0.39
VPS52-214ENST00000463486 APPL1Q9UKG1 709 aa17.48■□□□□ 0.39
VPS52-214ENST00000463486 PADI4Q9UM07 663 aa17.48■□□□□ 0.39
VPS52-214ENST00000463486 FREM2Q5SZK8 3169 aa17.48■□□□□ 0.39
VPS52-214ENST00000463486 TRBV5-4A0A0C4DH59 114 aa17.47■□□□□ 0.39
VPS52-214ENST00000463486 A6NCN8 305 aa17.47■□□□□ 0.39
VPS52-214ENST00000463486 E7EVH7 732 aa17.47■□□□□ 0.39
VPS52-214ENST00000463486 CDK4P11802 303 aa17.47■□□□□ 0.39
VPS52-214ENST00000463486 TPSB2P20231 275 aa17.47■□□□□ 0.39
VPS52-214ENST00000463486 PTGIRP43119 386 aa17.47■□□□□ 0.39
VPS52-214ENST00000463486 DUSP3P51452 185 aaPredicted RBP17.47■□□□□ 0.39
VPS52-214ENST00000463486 ETF1P62495 437 aaKnown RBP17.47■□□□□ 0.39
VPS52-214ENST00000463486 TMPRSS15P98073 1019 aa17.47■□□□□ 0.39
VPS52-214ENST00000463486 B4GALNT1Q00973 533 aa17.47■□□□□ 0.39
VPS52-214ENST00000463486 INSM1Q01101 510 aaPredicted RBP17.47■□□□□ 0.39
VPS52-214ENST00000463486 ACVR1Q04771 509 aa17.47■□□□□ 0.39
VPS52-214ENST00000463486 NFATC2Q13469 925 aa17.47■□□□□ 0.39
VPS52-214ENST00000463486 ITGA9Q13797 1035 aa17.47■□□□□ 0.39
VPS52-214ENST00000463486 HLTFQ14527 1009 aaKnown RBP eCLIP17.47■□□□□ 0.39
VPS52-214ENST00000463486 TPSAB1Q15661 275 aa17.47■□□□□ 0.39
VPS52-214ENST00000463486 CCDC157Q569K6 752 aa17.47■□□□□ 0.39
VPS52-214ENST00000463486 ANKRD22Q5VYY1 191 aa17.47■□□□□ 0.39
VPS52-214ENST00000463486 SLC30A9Q6PML9 568 aa17.47■□□□□ 0.39
VPS52-214ENST00000463486 MARCH9Q86YJ5 346 aa17.47■□□□□ 0.39
VPS52-214ENST00000463486 RASGEF1AQ8N9B8 481 aa17.47■□□□□ 0.39
VPS52-214ENST00000463486 OR13J1Q8NGT2 312 aa17.47■□□□□ 0.39
VPS52-214ENST00000463486 IFI44Q8TCB0 444 aa17.47■□□□□ 0.39
VPS52-214ENST00000463486 STYXQ8WUJ0 223 aa17.47■□□□□ 0.39
VPS52-214ENST00000463486 SLCO2A1Q92959 643 aa17.47■□□□□ 0.39
VPS52-214ENST00000463486 CDKN2AIPNLQ96HQ2 116 aa17.47■□□□□ 0.39
VPS52-214ENST00000463486 ZNF778Q96MU6 729 aa17.47■□□□□ 0.39
VPS52-214ENST00000463486 TMEM121BQ9BXQ6 578 aaPredicted RBP17.47■□□□□ 0.39
VPS52-214ENST00000463486 ASB8Q9H765 288 aa17.47■□□□□ 0.39
VPS52-214ENST00000463486 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.47■□□□□ 0.39
VPS52-214ENST00000463486 GULP1Q9UBP9 304 aa17.47■□□□□ 0.39
VPS52-214ENST00000463486 RABGEF1Q9UJ41 708 aa17.47■□□□□ 0.39
VPS52-214ENST00000463486 ANGPTL2Q9UKU9 493 aa17.47■□□□□ 0.39
VPS52-214ENST00000463486 RIMKLBQ9ULI2 386 aa17.47■□□□□ 0.39
VPS52-214ENST00000463486 DOLKQ9UPQ8 538 aa17.47■□□□□ 0.39
VPS52-214ENST00000463486 NEUROG3Q9Y4Z2 214 aa17.47■□□□□ 0.39
VPS52-214ENST00000463486 COL27A1Q8IZC6 1860 aaPredicted RBP17.46■□□□□ 0.39
VPS52-214ENST00000463486 CPED1A4D0V7 1026 aa17.46■□□□□ 0.39
VPS52-214ENST00000463486 SGTAO43765 313 aa17.46■□□□□ 0.39
VPS52-214ENST00000463486 OPA1O60313 960 aa17.46■□□□□ 0.39
VPS52-214ENST00000463486 CDK14O94921 469 aa17.46■□□□□ 0.39
VPS52-214ENST00000463486 PRSS56P0CW18 603 aa17.46■□□□□ 0.39
VPS52-214ENST00000463486 ADRA1DP25100 572 aa17.46■□□□□ 0.39
VPS52-214ENST00000463486 HADHAP40939 763 aa17.46■□□□□ 0.39
VPS52-214ENST00000463486 ACTR1BP42025 376 aa17.46■□□□□ 0.39
VPS52-214ENST00000463486 RPIAP49247 311 aa17.46■□□□□ 0.39
VPS52-214ENST00000463486 CDKN1CP49918 316 aaPredicted RBP17.46■□□□□ 0.39
VPS52-214ENST00000463486 CLCNKAP51800 687 aa17.46■□□□□ 0.39
VPS52-214ENST00000463486 CTSCP53634 463 aa17.46■□□□□ 0.39
VPS52-214ENST00000463486 ACTR1AP61163 376 aa17.46■□□□□ 0.39
VPS52-214ENST00000463486 BASP1P80723 227 aaKnown RBP17.46■□□□□ 0.39
VPS52-214ENST00000463486 CDK16Q00536 496 aa17.46■□□□□ 0.39
VPS52-214ENST00000463486 GPS1Q13098 491 aa17.46■□□□□ 0.39
VPS52-214ENST00000463486 LDLRAP1Q5SW96 308 aa17.46■□□□□ 0.39
VPS52-214ENST00000463486 CDCP2Q5VXM1 449 aa17.46■□□□□ 0.39
VPS52-214ENST00000463486 PPP1R21Q6ZMI0 780 aa17.46■□□□□ 0.39
VPS52-214ENST00000463486 CHST15Q7LFX5 561 aaPredicted RBP17.46■□□□□ 0.39
VPS52-214ENST00000463486 EFL1Q7Z2Z2 1120 aaKnown RBP17.46■□□□□ 0.39
VPS52-214ENST00000463486 NAGSQ8N159 534 aa17.46■□□□□ 0.39
VPS52-214ENST00000463486 DNAAF3Q8N9W5 541 aa17.46■□□□□ 0.39
VPS52-214ENST00000463486 PATE1Q8WXA2 126 aa17.46■□□□□ 0.39
VPS52-214ENST00000463486 CPT1BQ92523 772 aa17.46■□□□□ 0.39
VPS52-214ENST00000463486 GLMNQ92990 594 aa17.46■□□□□ 0.39
VPS52-214ENST00000463486 CAPZA3Q96KX2 299 aa17.46■□□□□ 0.39
VPS52-214ENST00000463486 DDX47Q9H0S4 455 aaKnown RBP17.46■□□□□ 0.39
VPS52-214ENST00000463486 DPEP2Q9H4A9 486 aa17.46■□□□□ 0.39
VPS52-214ENST00000463486 TBC1D29Q9UFV1 150 aa17.46■□□□□ 0.39
VPS52-214ENST00000463486 SLC2A6Q9UGQ3 507 aa17.46■□□□□ 0.39
VPS52-214ENST00000463486 PCYOX1Q9UHG3 505 aa17.46■□□□□ 0.39
VPS52-214ENST00000463486 ACP5P13686 325 aa17.45■□□□□ 0.38
VPS52-214ENST00000463486 MC4RP32245 332 aa17.45■□□□□ 0.38
VPS52-214ENST00000463486 LMAN1P49257 510 aa17.45■□□□□ 0.38
VPS52-214ENST00000463486 VPS41P49754 854 aa17.45■□□□□ 0.38
VPS52-214ENST00000463486 E2F1Q01094 437 aa17.45■□□□□ 0.38
VPS52-214ENST00000463486 C14orf28Q4W4Y0 310 aa17.45■□□□□ 0.38
VPS52-214ENST00000463486 TSTD2Q5T7W7 516 aa17.45■□□□□ 0.38
VPS52-214ENST00000463486 LRRC8BQ6P9F7 803 aa17.45■□□□□ 0.38
VPS52-214ENST00000463486 XKR5Q6UX68 686 aa17.45■□□□□ 0.38
VPS52-214ENST00000463486 CCNI2Q6ZMN8 369 aaPredicted RBP17.45■□□□□ 0.38
VPS52-214ENST00000463486 SNX20Q7Z614 316 aa17.45■□□□□ 0.38
VPS52-214ENST00000463486 CAND1Q86VP6 1230 aaKnown RBP17.45■□□□□ 0.38
VPS52-214ENST00000463486 PIANPQ8IYJ0 282 aa17.45■□□□□ 0.38
VPS52-214ENST00000463486 CACTIN-AS1Q8N1I8 211 aa17.45■□□□□ 0.38
VPS52-214ENST00000463486 NXPE1Q8N323 547 aa17.45■□□□□ 0.38
VPS52-214ENST00000463486 ZDHHC1Q8WTX9 485 aa17.45■□□□□ 0.38
VPS52-214ENST00000463486 FAM96AQ9H5X1 160 aa17.45■□□□□ 0.38
VPS52-214ENST00000463486 MSRB2Q9Y3D2 182 aa17.45■□□□□ 0.38
VPS52-214ENST00000463486 TCAF1Q9Y4C2 921 aa17.45■□□□□ 0.38
VPS52-214ENST00000463486 ZFC3H1O60293 1989 aaKnown RBP17.45■□□□□ 0.38
VPS52-214ENST00000463486 EPG5Q9HCE0 2579 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms