RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 KIAA0907Q7Z7F0 614 aaPredicted RBP9.86□□□□□ -0.83
PTPRD-207ENST00000463477 CILP2Q8IUL8 1156 aa9.86□□□□□ -0.83
PTPRD-207ENST00000463477 SLC22A9Q8IVM8 553 aa9.86□□□□□ -0.83
PTPRD-207ENST00000463477 FBXW8Q8N3Y1 598 aa9.86□□□□□ -0.83
PTPRD-207ENST00000463477 POU5F2Q8N7G0 328 aa9.86□□□□□ -0.83
PTPRD-207ENST00000463477 ZNF557Q8N988 423 aaPredicted RBP9.86□□□□□ -0.83
PTPRD-207ENST00000463477 KDM1BQ8NB78 822 aa9.86□□□□□ -0.83
PTPRD-207ENST00000463477 HEXDCQ8WVB3 486 aa9.86□□□□□ -0.83
PTPRD-207ENST00000463477 IGSF8Q969P0 613 aa9.86□□□□□ -0.83
PTPRD-207ENST00000463477 CLPTM1LQ96KA5 538 aa9.86□□□□□ -0.83
PTPRD-207ENST00000463477 TRMOQ9BU70 441 aa9.86□□□□□ -0.83
PTPRD-207ENST00000463477 POLR1EQ9GZS1 481 aaKnown RBP9.86□□□□□ -0.83
PTPRD-207ENST00000463477 PDFQ9HBH1 243 aa9.86□□□□□ -0.83
PTPRD-207ENST00000463477 POPDC3Q9HBV1 291 aa9.86□□□□□ -0.83
PTPRD-207ENST00000463477 S100A14Q9HCY8 104 aa9.86□□□□□ -0.83
PTPRD-207ENST00000463477 FAM86C1Q9NVL1 165 aa9.86□□□□□ -0.83
PTPRD-207ENST00000463477 ZDHHC2Q9UIJ5 367 aa9.86□□□□□ -0.83
PTPRD-207ENST00000463477 HCN2Q9UL51 889 aa9.86□□□□□ -0.83
PTPRD-207ENST00000463477 CLEC4EQ9ULY5 219 aa9.86□□□□□ -0.83
PTPRD-207ENST00000463477 MMP17Q9ULZ9 603 aa9.86□□□□□ -0.83
PTPRD-207ENST00000463477 SLC8A2Q9UPR5 921 aa9.86□□□□□ -0.83
PTPRD-207ENST00000463477 CDYLQ9Y232 598 aa9.86□□□□□ -0.83
PTPRD-207ENST00000463477 PTPRZ1P23471 2315 aaPredicted RBP9.86□□□□□ -0.83
PTPRD-207ENST00000463477 CCDC78A2IDD5 438 aa9.85□□□□□ -0.83
PTPRD-207ENST00000463477 MEI4A8MW99 385 aa9.85□□□□□ -0.83
PTPRD-207ENST00000463477 E9PBE3 544 aa9.85□□□□□ -0.83
PTPRD-207ENST00000463477 NPC1O15118 1278 aa9.85□□□□□ -0.83
PTPRD-207ENST00000463477 KLHL41O60662 606 aa9.85□□□□□ -0.83
PTPRD-207ENST00000463477 SMNDC1O75940 238 aaKnown RBP eCLIP9.85□□□□□ -0.83
PTPRD-207ENST00000463477 F7P08709 466 aaPredicted RBP9.85□□□□□ -0.83
PTPRD-207ENST00000463477 ATXN1LP0C7T5 689 aaKnown RBP9.85□□□□□ -0.83
PTPRD-207ENST00000463477 PSMA3P25788 255 aa9.85□□□□□ -0.83
PTPRD-207ENST00000463477 PIK3R1P27986 724 aa9.85□□□□□ -0.83
PTPRD-207ENST00000463477 CNR2P34972 360 aa9.85□□□□□ -0.83
PTPRD-207ENST00000463477 ABL2P42684 1182 aa9.85□□□□□ -0.83
PTPRD-207ENST00000463477 SEC13P55735 322 aa9.85□□□□□ -0.83
PTPRD-207ENST00000463477 XIAPP98170 497 aa9.85□□□□□ -0.83
PTPRD-207ENST00000463477 NFKB2Q00653 900 aa9.85□□□□□ -0.83
PTPRD-207ENST00000463477 DSC2Q02487 901 aa9.85□□□□□ -0.83
PTPRD-207ENST00000463477 KLC1Q07866 573 aa9.85□□□□□ -0.83
PTPRD-207ENST00000463477 DMC1Q14565 340 aa9.85□□□□□ -0.83
PTPRD-207ENST00000463477 LBRQ14739 615 aaKnown RBP9.85□□□□□ -0.83
PTPRD-207ENST00000463477 CRY1Q16526 586 aa9.85□□□□□ -0.83
PTPRD-207ENST00000463477 GSTA3Q16772 222 aa9.85□□□□□ -0.83
PTPRD-207ENST00000463477 ANO7Q6IWH7 933 aa9.85□□□□□ -0.83
PTPRD-207ENST00000463477 FAM45BPQ6NSW5 357 aa9.85□□□□□ -0.83
PTPRD-207ENST00000463477 CNSTQ6PJW8 725 aa9.85□□□□□ -0.83
PTPRD-207ENST00000463477 C16orf89Q6UX73 402 aa9.85□□□□□ -0.83
PTPRD-207ENST00000463477 TRMT11Q7Z4G4 463 aaKnown RBP9.85□□□□□ -0.83
PTPRD-207ENST00000463477 AFAP1L2Q8N4X5 818 aa9.85□□□□□ -0.83
PTPRD-207ENST00000463477 ZNF513Q8N8E2 541 aaPredicted RBP9.85□□□□□ -0.83
PTPRD-207ENST00000463477 GPATCH11Q8N954 259 aa9.85□□□□□ -0.83
PTPRD-207ENST00000463477 TXNDC5Q8NBS9 432 aaKnown RBP9.85□□□□□ -0.83
PTPRD-207ENST00000463477 FIBINQ8TAL6 211 aa9.85□□□□□ -0.83
PTPRD-207ENST00000463477 FAM45AQ8TCE6 357 aa9.85□□□□□ -0.83
PTPRD-207ENST00000463477 MIEF2Q96C03 454 aa9.85□□□□□ -0.83
PTPRD-207ENST00000463477 PHOX2BQ99453 314 aa9.85□□□□□ -0.83
PTPRD-207ENST00000463477 ZNF184Q99676 751 aaPredicted RBP9.85□□□□□ -0.83
PTPRD-207ENST00000463477 EML4Q9HC35 981 aaKnown RBP9.85□□□□□ -0.83
PTPRD-207ENST00000463477 EBF1Q9UH73 591 aa9.85□□□□□ -0.83
PTPRD-207ENST00000463477 TYW5A2RUC4 315 aaKnown RBP9.84□□□□□ -0.83
PTPRD-207ENST00000463477 A6NHS1 94 aa9.84□□□□□ -0.83
PTPRD-207ENST00000463477 LDB2O43679 373 aa9.84□□□□□ -0.83
PTPRD-207ENST00000463477 TBL1XO60907 577 aa9.84□□□□□ -0.83
PTPRD-207ENST00000463477 IPO13O94829 963 aaKnown RBP9.84□□□□□ -0.83
PTPRD-207ENST00000463477 KLF8O95600 359 aaPredicted RBP9.84□□□□□ -0.83
PTPRD-207ENST00000463477 OGNP20774 298 aaKnown RBP9.84□□□□□ -0.83
PTPRD-207ENST00000463477 TACR2P21452 398 aa9.84□□□□□ -0.83
PTPRD-207ENST00000463477 SAT1P21673 171 aa9.84□□□□□ -0.83
PTPRD-207ENST00000463477 HLA-FP30511 346 aa9.84□□□□□ -0.83
PTPRD-207ENST00000463477 GLRBP48167 497 aa9.84□□□□□ -0.83
PTPRD-207ENST00000463477 SUOXP51687 545 aa9.84□□□□□ -0.83
PTPRD-207ENST00000463477 SGSHP51688 502 aa9.84□□□□□ -0.83
PTPRD-207ENST00000463477 DGKEP52429 567 aa9.84□□□□□ -0.83
PTPRD-207ENST00000463477 INHBCP55103 352 aa9.84□□□□□ -0.83
PTPRD-207ENST00000463477 RPL26P61254 145 aaKnown RBP9.84□□□□□ -0.83
PTPRD-207ENST00000463477 TBL3Q12788 808 aaKnown RBP9.84□□□□□ -0.83
PTPRD-207ENST00000463477 CUL3Q13618 768 aa9.84□□□□□ -0.83
PTPRD-207ENST00000463477 EIF4HQ15056 248 aaKnown RBP9.84□□□□□ -0.83
PTPRD-207ENST00000463477 PCSK7Q16549 785 aa9.84□□□□□ -0.83
PTPRD-207ENST00000463477 GEN1Q17RS7 908 aa9.84□□□□□ -0.83
PTPRD-207ENST00000463477 RALGPS1Q5JS13 557 aa9.84□□□□□ -0.83
PTPRD-207ENST00000463477 SIRPB2Q5JXA9 342 aa9.84□□□□□ -0.83
PTPRD-207ENST00000463477 EOGTQ5NDL2 527 aa9.84□□□□□ -0.83
PTPRD-207ENST00000463477 RBM20Q5T481 1227 aaKnown RBP9.84□□□□□ -0.83
PTPRD-207ENST00000463477 HECTD2Q5U5R9 776 aa9.84□□□□□ -0.83
PTPRD-207ENST00000463477 RAP1GAP2Q684P5 730 aa9.84□□□□□ -0.83
PTPRD-207ENST00000463477 TFAP2DQ7Z6R9 452 aa9.84□□□□□ -0.83
PTPRD-207ENST00000463477 WDR5BQ86VZ2 330 aa9.84□□□□□ -0.83
PTPRD-207ENST00000463477 DEFB107AQ8IZN7 70 aa9.84□□□□□ -0.83
PTPRD-207ENST00000463477 PGBD5Q8N414 524 aa9.84□□□□□ -0.83
PTPRD-207ENST00000463477 SLC25A41Q8N5S1 370 aa9.84□□□□□ -0.83
PTPRD-207ENST00000463477 HJURPQ8NCD3 748 aaPredicted RBP9.84□□□□□ -0.83
PTPRD-207ENST00000463477 CEP70Q8NHQ1 597 aa9.84□□□□□ -0.83
PTPRD-207ENST00000463477 DTX3LQ8TDB6 740 aa9.84□□□□□ -0.83
PTPRD-207ENST00000463477 L3HYPDHQ96EM0 354 aa9.84□□□□□ -0.83
PTPRD-207ENST00000463477 LENG8Q96PV6 779 aaPredicted RBP9.84□□□□□ -0.83
PTPRD-207ENST00000463477 SERPINI1Q99574 410 aa9.84□□□□□ -0.83
PTPRD-207ENST00000463477 MAGEH1Q9H213 219 aa9.84□□□□□ -0.83
PTPRD-207ENST00000463477 VCX3BQ9H321 246 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms