RNA–Protein interactions for RNA: ENST00000462494.5

ACTB-207, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 2,245 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-207ENST00000462494 TTC16Q8NEE8 873 aa16.8■□□□□ 0.28
ACTB-207ENST00000462494 GRIN3AQ8TCU5 1115 aa16.8■□□□□ 0.28
ACTB-207ENST00000462494 MUC3BQ9H195 1237 aa16.8■□□□□ 0.28
ACTB-207ENST00000462494 GKN1Q9NS71 199 aa16.8■□□□□ 0.28
ACTB-207ENST00000462494 PTTG2Q9NZH5 202 aa16.8■□□□□ 0.28
ACTB-207ENST00000462494 ZNF225Q9UK10 706 aa16.8■□□□□ 0.28
ACTB-207ENST00000462494 PCTPQ9UKL6 214 aa16.8■□□□□ 0.28
ACTB-207ENST00000462494 DMTF1Q9Y222 760 aa16.8■□□□□ 0.28
ACTB-207ENST00000462494 AQP12BA6NM10 295 aa16.8■□□□□ 0.28
ACTB-207ENST00000462494 FAM155AB1AL88 458 aaPredicted RBP16.8■□□□□ 0.28
ACTB-207ENST00000462494 E5RI56 91 aa16.8■□□□□ 0.28
ACTB-207ENST00000462494 ARPC2O15144 300 aa16.8■□□□□ 0.28
ACTB-207ENST00000462494 HNRNPRO43390 633 aaKnown RBP16.8■□□□□ 0.28
ACTB-207ENST00000462494 UROSP10746 265 aa16.8■□□□□ 0.28
ACTB-207ENST00000462494 MTHFD1P11586 935 aaKnown RBP16.8■□□□□ 0.28
ACTB-207ENST00000462494 HSD17B1P14061 328 aa16.8■□□□□ 0.28
ACTB-207ENST00000462494 OXTRP30559 389 aa16.8■□□□□ 0.28
ACTB-207ENST00000462494 SH3BGRP55822 239 aaPredicted RBP16.8■□□□□ 0.28
ACTB-207ENST00000462494 UFM1P61960 85 aa16.8■□□□□ 0.28
ACTB-207ENST00000462494 BNIP2Q12982 314 aa16.8■□□□□ 0.28
ACTB-207ENST00000462494 MTA1Q13330 715 aa16.8■□□□□ 0.28
ACTB-207ENST00000462494 C5orf22Q49AR2 442 aa16.8■□□□□ 0.28
ACTB-207ENST00000462494 CTSL3PQ5NE16 218 aa16.8■□□□□ 0.28
ACTB-207ENST00000462494 PPP4R4Q6NUP7 873 aa16.8■□□□□ 0.28
ACTB-207ENST00000462494 TAS2R42Q7RTR8 314 aa16.8■□□□□ 0.28
ACTB-207ENST00000462494 SPATA19Q7Z5L4 167 aa16.8■□□□□ 0.28
ACTB-207ENST00000462494 GPSM1Q86YR5 675 aa16.8■□□□□ 0.28
ACTB-207ENST00000462494 AQP12AQ8IXF9 295 aa16.8■□□□□ 0.28
ACTB-207ENST00000462494 RPL10LQ96L21 214 aaKnown RBP16.8■□□□□ 0.28
ACTB-207ENST00000462494 CASD1Q96PB1 797 aa16.8■□□□□ 0.28
ACTB-207ENST00000462494 CDK15Q96Q40 435 aa16.8■□□□□ 0.28
ACTB-207ENST00000462494 HAUS8Q9BT25 410 aa16.8■□□□□ 0.28
ACTB-207ENST00000462494 RBM38Q9H0Z9 239 aaKnown RBP16.8■□□□□ 0.28
ACTB-207ENST00000462494 DDX18Q9NVP1 670 aaKnown RBP16.8■□□□□ 0.28
ACTB-207ENST00000462494 EIF2B4Q9UI10 523 aaKnown RBP16.8■□□□□ 0.28
ACTB-207ENST00000462494 MYRFQ9Y2G1 1151 aa16.8■□□□□ 0.28
ACTB-207ENST00000462494 ARIH1Q9Y4X5 557 aaPredicted RBP16.8■□□□□ 0.28
ACTB-207ENST00000462494 ASB1Q9Y576 335 aa16.8■□□□□ 0.28
ACTB-207ENST00000462494 A0A1W2PP18 115 aa16.79■□□□□ 0.28
ACTB-207ENST00000462494 CCDC154A6NI56 674 aa16.79■□□□□ 0.28
ACTB-207ENST00000462494 IQCF5A8MTL0 148 aa16.79■□□□□ 0.28
ACTB-207ENST00000462494 H3BSA7 217 aa16.79■□□□□ 0.28
ACTB-207ENST00000462494 INPP4BO15327 924 aa16.79■□□□□ 0.28
ACTB-207ENST00000462494 STX7O15400 261 aaKnown RBP16.79■□□□□ 0.28
ACTB-207ENST00000462494 GPR39O43194 453 aa16.79■□□□□ 0.28
ACTB-207ENST00000462494 CLDN11O75508 207 aa16.79■□□□□ 0.28
ACTB-207ENST00000462494 ESRRBO95718 433 aa16.79■□□□□ 0.28
ACTB-207ENST00000462494 RPL17P18621 184 aaKnown RBP16.79■□□□□ 0.28
ACTB-207ENST00000462494 CR2P20023 1033 aa16.79■□□□□ 0.28
ACTB-207ENST00000462494 TTPAP49638 278 aa16.79■□□□□ 0.28
ACTB-207ENST00000462494 HK3P52790 923 aa16.79■□□□□ 0.28
ACTB-207ENST00000462494 IL2P60568 153 aa16.79■□□□□ 0.28
ACTB-207ENST00000462494 PAGE3Q5JUK9 113 aa16.79■□□□□ 0.28
ACTB-207ENST00000462494 CPNE9Q8IYJ1 553 aa16.79■□□□□ 0.28
ACTB-207ENST00000462494 CDYL2Q8N8U2 506 aa16.79■□□□□ 0.28
ACTB-207ENST00000462494 OR2T11Q8NH01 316 aa16.79■□□□□ 0.28
ACTB-207ENST00000462494 RMND5BQ96G75 393 aaPredicted RBP16.79■□□□□ 0.28
ACTB-207ENST00000462494 SLC52A3Q9NQ40 469 aa16.79■□□□□ 0.28
ACTB-207ENST00000462494 PNPLA3Q9NST1 481 aa16.79■□□□□ 0.28
ACTB-207ENST00000462494 COMMD8Q9NX08 183 aa16.79■□□□□ 0.28
ACTB-207ENST00000462494 DUS2Q9NX74 493 aaKnown RBP16.79■□□□□ 0.28
ACTB-207ENST00000462494 RNF186Q9NXI6 227 aa16.79■□□□□ 0.28
ACTB-207ENST00000462494 ACTR3BQ9P1U1 418 aa16.79■□□□□ 0.28
ACTB-207ENST00000462494 PCDHA9Q9Y5H5 950 aa16.79■□□□□ 0.28
ACTB-207ENST00000462494 RNF103-CHMP3A0A140T963 221 aa16.78■□□□□ 0.28
ACTB-207ENST00000462494 ANKRD66B4E2M5 251 aa16.78■□□□□ 0.28
ACTB-207ENST00000462494 STX16O14662 325 aa16.78■□□□□ 0.28
ACTB-207ENST00000462494 PFDN6O15212 129 aa16.78■□□□□ 0.28
ACTB-207ENST00000462494 ADAM12O43184 909 aa16.78■□□□□ 0.28
ACTB-207ENST00000462494 SLC22A3O75751 556 aa16.78■□□□□ 0.28
ACTB-207ENST00000462494 OR4F21O95013 312 aa16.78■□□□□ 0.28
ACTB-207ENST00000462494 MLYCDO95822 493 aa16.78■□□□□ 0.28
ACTB-207ENST00000462494 NCK1P16333 377 aa16.78■□□□□ 0.28
ACTB-207ENST00000462494 FASP25445 335 aa16.78■□□□□ 0.28
ACTB-207ENST00000462494 CORO1AP31146 461 aaKnown RBP16.78■□□□□ 0.28
ACTB-207ENST00000462494 CREB5Q02930 508 aa16.78■□□□□ 0.28
ACTB-207ENST00000462494 CYP51A1Q16850 503 aa16.78■□□□□ 0.28
ACTB-207ENST00000462494 NHSL2Q5HYW2 709 aa16.78■□□□□ 0.28
ACTB-207ENST00000462494 RNF219Q5W0B1 726 aaPredicted RBP16.78■□□□□ 0.28
ACTB-207ENST00000462494 LCN8Q6JVE9 175 aa16.78■□□□□ 0.28
ACTB-207ENST00000462494 TXNDC11Q6PKC3 985 aa16.78■□□□□ 0.28
ACTB-207ENST00000462494 FAM47BQ8NA70 645 aa16.78■□□□□ 0.28
ACTB-207ENST00000462494 OR56A4Q8NGH8 313 aa16.78■□□□□ 0.28
ACTB-207ENST00000462494 KCTD14Q9BQ13 255 aaPredicted RBP16.78■□□□□ 0.28
ACTB-207ENST00000462494 ADGRE3Q9BY15 652 aa16.78■□□□□ 0.28
ACTB-207ENST00000462494 ALG2Q9H553 416 aa16.78■□□□□ 0.28
ACTB-207ENST00000462494 PIF1Q9H611 641 aa16.78■□□□□ 0.28
ACTB-207ENST00000462494 OLAHQ9NV23 265 aa16.78■□□□□ 0.28
ACTB-207ENST00000462494 AIG1Q9NVV5 245 aa16.78■□□□□ 0.28
ACTB-207ENST00000462494 SLAMF8Q9P0V8 285 aa16.78■□□□□ 0.28
ACTB-207ENST00000462494 LRFN2Q9ULH4 789 aa16.78■□□□□ 0.28
ACTB-207ENST00000462494 PADI4Q9UM07 663 aa16.78■□□□□ 0.28
ACTB-207ENST00000462494 VPS9D1Q9Y2B5 631 aa16.78■□□□□ 0.28
ACTB-207ENST00000462494 ASPDHA6ND91 283 aa16.78■□□□□ 0.28
ACTB-207ENST00000462494 H7C4K7 107 aa16.78■□□□□ 0.28
ACTB-207ENST00000462494 COCHO43405 550 aa16.78■□□□□ 0.28
ACTB-207ENST00000462494 TSPAN12O95859 305 aa16.78■□□□□ 0.28
ACTB-207ENST00000462494 KLKB1P03952 638 aa16.78■□□□□ 0.28
ACTB-207ENST00000462494 RPL10P27635 214 aaKnown RBP16.78■□□□□ 0.28
ACTB-207ENST00000462494 TWF1Q12792 350 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms