RNA–Protein interactions for RNA: ENST00000462352.5

CPNE1-221, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-221ENST00000462352 RHOXF2BP0C7M4 288 aa11.67□□□□□ -0.54
CPNE1-221ENST00000462352 ZNF883P0CG24 379 aa11.67□□□□□ -0.54
CPNE1-221ENST00000462352 PGAM1P18669 254 aa11.67□□□□□ -0.54
CPNE1-221ENST00000462352 PAMP19021 973 aa11.67□□□□□ -0.54
CPNE1-221ENST00000462352 ARNTP27540 789 aa11.67□□□□□ -0.54
CPNE1-221ENST00000462352 ELK3P41970 407 aa11.67□□□□□ -0.54
CPNE1-221ENST00000462352 ARCN1P48444 511 aaKnown RBP11.67□□□□□ -0.54
CPNE1-221ENST00000462352 BLKP51451 505 aa11.67□□□□□ -0.54
CPNE1-221ENST00000462352 HNRNPKP61978 463 aaKnown RBP eCLIP11.67□□□□□ -0.54
CPNE1-221ENST00000462352 TMEM115Q12893 351 aaPredicted RBP11.67□□□□□ -0.54
CPNE1-221ENST00000462352 PDIA2Q13087 525 aaKnown RBP11.67□□□□□ -0.54
CPNE1-221ENST00000462352 CBLBQ13191 982 aa11.67□□□□□ -0.54
CPNE1-221ENST00000462352 HP1BP3Q5SSJ5 553 aaPredicted RBP11.67□□□□□ -0.54
CPNE1-221ENST00000462352 KIAA0930Q6ICG6 404 aaPredicted RBP11.67□□□□□ -0.54
CPNE1-221ENST00000462352 CENPUQ71F23 418 aa11.67□□□□□ -0.54
CPNE1-221ENST00000462352 MARK2Q7KZI7 788 aaKnown RBP11.67□□□□□ -0.54
CPNE1-221ENST00000462352 TAS2R42Q7RTR8 314 aa11.67□□□□□ -0.54
CPNE1-221ENST00000462352 SERPINA9Q86WD7 417 aa11.67□□□□□ -0.54
CPNE1-221ENST00000462352 IGDCC3Q8IVU1 814 aa11.67□□□□□ -0.54
CPNE1-221ENST00000462352 PIANPQ8IYJ0 282 aa11.67□□□□□ -0.54
CPNE1-221ENST00000462352 NXPE1Q8N323 547 aa11.67□□□□□ -0.54
CPNE1-221ENST00000462352 ZNF669Q96BR6 464 aaPredicted RBP11.67□□□□□ -0.54
CPNE1-221ENST00000462352 LRRC39Q96DD0 335 aa11.67□□□□□ -0.54
CPNE1-221ENST00000462352 SCARF2Q96GP6 870 aaPredicted RBP11.67□□□□□ -0.54
CPNE1-221ENST00000462352 SGSM3Q96HU1 749 aa11.67□□□□□ -0.54
CPNE1-221ENST00000462352 RHOXF2Q9BQY4 288 aa11.67□□□□□ -0.54
CPNE1-221ENST00000462352 WDR83Q9BRX9 315 aaKnown RBP11.67□□□□□ -0.54
CPNE1-221ENST00000462352 NAT9Q9BTE0 207 aa11.67□□□□□ -0.54
CPNE1-221ENST00000462352 CARS2Q9HA77 564 aaKnown RBP11.67□□□□□ -0.54
CPNE1-221ENST00000462352 TM7SF3Q9NS93 570 aa11.67□□□□□ -0.54
CPNE1-221ENST00000462352 ZDHHC18Q9NUE0 388 aa11.67□□□□□ -0.54
CPNE1-221ENST00000462352 SUFUQ9UMX1 484 aa11.67□□□□□ -0.54
CPNE1-221ENST00000462352 CHMP2BQ9UQN3 213 aa11.67□□□□□ -0.54
CPNE1-221ENST00000462352 TEX264Q9Y6I9 313 aa11.67□□□□□ -0.54
CPNE1-221ENST00000462352 PIEZO1Q92508 2521 aa11.66□□□□□ -0.54
CPNE1-221ENST00000462352 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.66□□□□□ -0.54
CPNE1-221ENST00000462352 VEGFDO43915 354 aa11.66□□□□□ -0.54
CPNE1-221ENST00000462352 NUAK1O60285 661 aa11.66□□□□□ -0.54
CPNE1-221ENST00000462352 CDK14O94921 469 aa11.66□□□□□ -0.54
CPNE1-221ENST00000462352 ZNF8P17098 575 aaPredicted RBP11.66□□□□□ -0.54
CPNE1-221ENST00000462352 DGKAP23743 735 aa11.66□□□□□ -0.54
CPNE1-221ENST00000462352 ACRV1P26436 265 aa11.66□□□□□ -0.54
CPNE1-221ENST00000462352 AKT1P31749 480 aa11.66□□□□□ -0.54
CPNE1-221ENST00000462352 GNPDA1P46926 289 aa11.66□□□□□ -0.54
CPNE1-221ENST00000462352 SEMA3AQ14563 771 aa11.66□□□□□ -0.54
CPNE1-221ENST00000462352 FASTKD3Q14CZ7 662 aaKnown RBP11.66□□□□□ -0.54
CPNE1-221ENST00000462352 SMAD1Q15797 465 aaKnown RBP11.66□□□□□ -0.54
CPNE1-221ENST00000462352 DBN1Q16643 649 aa11.66□□□□□ -0.54
CPNE1-221ENST00000462352 UAP1L1Q3KQV9 507 aa11.66□□□□□ -0.54
CPNE1-221ENST00000462352 FASTKD1Q53R41 847 aaKnown RBP11.66□□□□□ -0.54
CPNE1-221ENST00000462352 PRRT3Q5FWE3 981 aa11.66□□□□□ -0.54
CPNE1-221ENST00000462352 TEX35Q5T0J7 233 aa11.66□□□□□ -0.54
CPNE1-221ENST00000462352 STPG1Q5TH74 334 aa11.66□□□□□ -0.54
CPNE1-221ENST00000462352 GATAD2AQ86YP4 633 aa11.66□□□□□ -0.54
CPNE1-221ENST00000462352 CCNJLQ8IV13 435 aa11.66□□□□□ -0.54
CPNE1-221ENST00000462352 ANKMY2Q8IV38 441 aa11.66□□□□□ -0.54
CPNE1-221ENST00000462352 ZBED8Q8IZ13 594 aa11.66□□□□□ -0.54
CPNE1-221ENST00000462352 PNPLA1Q8N8W4 532 aa11.66□□□□□ -0.54
CPNE1-221ENST00000462352 FBXO36Q8NEA4 188 aa11.66□□□□□ -0.54
CPNE1-221ENST00000462352 ZNF548Q8NEK5 533 aaPredicted RBP11.66□□□□□ -0.54
CPNE1-221ENST00000462352 LMX1AQ8TE12 382 aa11.66□□□□□ -0.54
CPNE1-221ENST00000462352 SAP25Q8TEE9 199 aa11.66□□□□□ -0.54
CPNE1-221ENST00000462352 IFT81Q8WYA0 676 aa11.66□□□□□ -0.54
CPNE1-221ENST00000462352 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.66□□□□□ -0.54
CPNE1-221ENST00000462352 CCDC97Q96F63 343 aaPredicted RBP11.66□□□□□ -0.54
CPNE1-221ENST00000462352 TTC25Q96NG3 672 aa11.66□□□□□ -0.54
CPNE1-221ENST00000462352 COPS8Q99627 209 aa11.66□□□□□ -0.54
CPNE1-221ENST00000462352 LRRC61Q9BV99 259 aa11.66□□□□□ -0.54
CPNE1-221ENST00000462352 FAM129AQ9BZQ8 928 aa11.66□□□□□ -0.54
CPNE1-221ENST00000462352 SLC13A1Q9BZW2 595 aa11.66□□□□□ -0.54
CPNE1-221ENST00000462352 ZCCHC2Q9C0B9 1178 aaKnown RBP11.66□□□□□ -0.54
CPNE1-221ENST00000462352 RMI1Q9H9A7 625 aa11.66□□□□□ -0.54
CPNE1-221ENST00000462352 SAYSD1Q9NPB0 183 aa11.66□□□□□ -0.54
CPNE1-221ENST00000462352 CATSPERZQ9NTU4 200 aa11.66□□□□□ -0.54
CPNE1-221ENST00000462352 ZDHHC3Q9NYG2 299 aa11.66□□□□□ -0.54
CPNE1-221ENST00000462352 SPASTQ9UBP0 616 aa11.66□□□□□ -0.54
CPNE1-221ENST00000462352 ZC3H7BQ9UGR2 993 aaKnown RBP11.66□□□□□ -0.54
CPNE1-221ENST00000462352 PCYT1BQ9Y5K3 369 aaPredicted RBP11.66□□□□□ -0.54
CPNE1-221ENST00000462352 FAM169AQ9Y6X4 670 aa11.66□□□□□ -0.54
CPNE1-221ENST00000462352 PTPRZ1P23471 2315 aaPredicted RBP11.66□□□□□ -0.54
CPNE1-221ENST00000462352 LRP4O75096 1905 aa11.66□□□□□ -0.54
CPNE1-221ENST00000462352 DNAH14Q0VDD8 3507 aa11.65□□□□□ -0.54
CPNE1-221ENST00000462352 PLXNB3Q9ULL4 1909 aa11.65□□□□□ -0.54
CPNE1-221ENST00000462352 IGLV3-16A0A075B6K0 115 aa11.65□□□□□ -0.54
CPNE1-221ENST00000462352 GPR89AB7ZAQ6 455 aa11.65□□□□□ -0.54
CPNE1-221ENST00000462352 GOLGA8KD6RF30 607 aa11.65□□□□□ -0.54
CPNE1-221ENST00000462352 GOLGA8TH3BQL2 631 aa11.65□□□□□ -0.54
CPNE1-221ENST00000462352 CHUKO15111 745 aa11.65□□□□□ -0.54
CPNE1-221ENST00000462352 EIF3HO15372 352 aaKnown RBP eCLIP11.65□□□□□ -0.54
CPNE1-221ENST00000462352 CD3EAPO15446 510 aaKnown RBP11.65□□□□□ -0.54
CPNE1-221ENST00000462352 AQP9O43315 295 aa11.65□□□□□ -0.54
CPNE1-221ENST00000462352 GRID2O43424 1007 aa11.65□□□□□ -0.54
CPNE1-221ENST00000462352 PCDHGA12O60330 932 aa11.65□□□□□ -0.54
CPNE1-221ENST00000462352 SLU7O95391 586 aaKnown RBP11.65□□□□□ -0.54
CPNE1-221ENST00000462352 TTC4O95801 387 aa11.65□□□□□ -0.54
CPNE1-221ENST00000462352 CELA2BP08218 269 aaPredicted RBP11.65□□□□□ -0.54
CPNE1-221ENST00000462352 GPR89BP0CG08 455 aa11.65□□□□□ -0.54
CPNE1-221ENST00000462352 CTSEP14091 401 aa11.65□□□□□ -0.54
CPNE1-221ENST00000462352 MSH3P20585 1137 aa11.65□□□□□ -0.54
CPNE1-221ENST00000462352 CARSP49589 748 aaKnown RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms