RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 UGT1A6P19224 532 aa15.31■□□□□ 0.04
LMNB1-203ENST00000460265 UGT1A1P22309 533 aa15.31■□□□□ 0.04
LMNB1-203ENST00000460265 UGT1A4P22310 534 aa15.31■□□□□ 0.04
LMNB1-203ENST00000460265 UGT1A3P35503 534 aa15.31■□□□□ 0.04
LMNB1-203ENST00000460265 UGT1A5P35504 534 aa15.31■□□□□ 0.04
LMNB1-203ENST00000460265 RGRP47804 291 aa15.31■□□□□ 0.04
LMNB1-203ENST00000460265 KCNC1P48547 511 aa15.31■□□□□ 0.04
LMNB1-203ENST00000460265 ZNF33AQ06730 810 aa15.31■□□□□ 0.04
LMNB1-203ENST00000460265 CLPPQ16740 277 aaPredicted RBP15.31■□□□□ 0.04
LMNB1-203ENST00000460265 TXNDC8Q6A555 127 aa15.31■□□□□ 0.04
LMNB1-203ENST00000460265 CLEC14AQ86T13 490 aa15.31■□□□□ 0.04
LMNB1-203ENST00000460265 KBTBD6Q86V97 674 aa15.31■□□□□ 0.04
LMNB1-203ENST00000460265 NPAS4Q8IUM7 802 aa15.31■□□□□ 0.04
LMNB1-203ENST00000460265 CDYL2Q8N8U2 506 aa15.31■□□□□ 0.04
LMNB1-203ENST00000460265 CDC26Q8NHZ8 85 aa15.31■□□□□ 0.04
LMNB1-203ENST00000460265 GRIN3AQ8TCU5 1115 aa15.31■□□□□ 0.04
LMNB1-203ENST00000460265 ACTRT2Q8TDY3 377 aa15.31■□□□□ 0.04
LMNB1-203ENST00000460265 CLIP3Q96DZ5 547 aa15.31■□□□□ 0.04
LMNB1-203ENST00000460265 SLC45A3Q96JT2 553 aa15.31■□□□□ 0.04
LMNB1-203ENST00000460265 TET1Q8NFU7 2136 aa15.31■□□□□ 0.04
LMNB1-203ENST00000460265 NPEPPSL1A6NEC2 478 aa15.3■□□□□ 0.04
LMNB1-203ENST00000460265 H3BNX3 289 aa15.3■□□□□ 0.04
LMNB1-203ENST00000460265 OR1I1O60431 355 aa15.3■□□□□ 0.04
LMNB1-203ENST00000460265 SEC24DO94855 1032 aaPredicted RBP15.3■□□□□ 0.04
LMNB1-203ENST00000460265 S1PR4O95977 384 aa15.3■□□□□ 0.04
LMNB1-203ENST00000460265 TM4SF4P48230 202 aa15.3■□□□□ 0.04
LMNB1-203ENST00000460265 PIK3CGP48736 1102 aa15.3■□□□□ 0.04
LMNB1-203ENST00000460265 CDKL1Q00532 357 aa15.3■□□□□ 0.04
LMNB1-203ENST00000460265 DSC1Q08554 894 aa15.3■□□□□ 0.04
LMNB1-203ENST00000460265 NR1D2Q14995 579 aa15.3■□□□□ 0.04
LMNB1-203ENST00000460265 ACAP2Q15057 778 aa15.3■□□□□ 0.04
LMNB1-203ENST00000460265 MAPRE2Q15555 327 aa15.3■□□□□ 0.04
LMNB1-203ENST00000460265 RGS21Q2M5E4 152 aa15.3■□□□□ 0.04
LMNB1-203ENST00000460265 VPS26BQ4G0F5 336 aa15.3■□□□□ 0.04
LMNB1-203ENST00000460265 C6orf10Q5SRN2 563 aa15.3■□□□□ 0.04
LMNB1-203ENST00000460265 ANKS6Q68DC2 871 aa15.3■□□□□ 0.04
LMNB1-203ENST00000460265 FAM151BQ6UXP7 276 aa15.3■□□□□ 0.04
LMNB1-203ENST00000460265 DNAJB14Q8TBM8 379 aa15.3■□□□□ 0.04
LMNB1-203ENST00000460265 BEGAINQ9BUH8 593 aa15.3■□□□□ 0.04
LMNB1-203ENST00000460265 CREBZFQ9NS37 354 aa15.3■□□□□ 0.04
LMNB1-203ENST00000460265 VPS51Q9UID3 782 aa15.3■□□□□ 0.04
LMNB1-203ENST00000460265 MYRFQ9Y2G1 1151 aa15.3■□□□□ 0.04
LMNB1-203ENST00000460265 INSIG1O15503 277 aa15.3■□□□□ 0.04
LMNB1-203ENST00000460265 IGLV3-25P01717 112 aa15.3■□□□□ 0.04
LMNB1-203ENST00000460265 CES1P23141 567 aa15.3■□□□□ 0.04
LMNB1-203ENST00000460265 SLC6A4P31645 630 aa15.3■□□□□ 0.04
LMNB1-203ENST00000460265 HTR7P34969 479 aa15.3■□□□□ 0.04
LMNB1-203ENST00000460265 ADRA1AP35348 466 aa15.3■□□□□ 0.04
LMNB1-203ENST00000460265 HSPA13P48723 471 aa15.3■□□□□ 0.04
LMNB1-203ENST00000460265 C1QTNF8P60827 252 aa15.3■□□□□ 0.04
LMNB1-203ENST00000460265 CAPRIN1Q14444 709 aaKnown RBP15.3■□□□□ 0.04
LMNB1-203ENST00000460265 KDM1BQ8NB78 822 aa15.3■□□□□ 0.04
LMNB1-203ENST00000460265 SH3RF2Q8TEC5 729 aa15.3■□□□□ 0.04
LMNB1-203ENST00000460265 C12orf43Q96C57 262 aaKnown RBP15.3■□□□□ 0.04
LMNB1-203ENST00000460265 SLC39A13Q96H72 371 aa15.3■□□□□ 0.04
LMNB1-203ENST00000460265 HGH1Q9BTY7 390 aa15.3■□□□□ 0.04
LMNB1-203ENST00000460265 SCHIP1Q9P0W5 487 aaPredicted RBP15.3■□□□□ 0.04
LMNB1-203ENST00000460265 LAMA3Q16787 3333 aa15.3■□□□□ 0.04
LMNB1-203ENST00000460265 RNF103-CHMP3A0A140T963 221 aa15.3■□□□□ 0.04
LMNB1-203ENST00000460265 CDC7O00311 574 aa15.3■□□□□ 0.04
LMNB1-203ENST00000460265 COCHO43405 550 aa15.3■□□□□ 0.04
LMNB1-203ENST00000460265 ALPIP09923 528 aa15.3■□□□□ 0.04
LMNB1-203ENST00000460265 BCL2A1Q16548 175 aa15.3■□□□□ 0.04
LMNB1-203ENST00000460265 CYP2A13Q16696 494 aa15.3■□□□□ 0.04
LMNB1-203ENST00000460265 LRRC73Q5JTD7 316 aa15.3■□□□□ 0.04
LMNB1-203ENST00000460265 NIPAL1Q6NVV3 410 aa15.3■□□□□ 0.04
LMNB1-203ENST00000460265 SIDT2Q8NBJ9 832 aaKnown RBP15.3■□□□□ 0.04
LMNB1-203ENST00000460265 STAG3L4Q8TBR4 150 aa15.3■□□□□ 0.04
LMNB1-203ENST00000460265 CDK15Q96Q40 435 aa15.3■□□□□ 0.04
LMNB1-203ENST00000460265 OSBPL10Q9BXB5 764 aa15.3■□□□□ 0.04
LMNB1-203ENST00000460265 C1QTNF1Q9BXJ1 281 aa15.3■□□□□ 0.04
LMNB1-203ENST00000460265 TREX1Q9NSU2 369 aa15.3■□□□□ 0.04
LMNB1-203ENST00000460265 SPO11Q9Y5K1 396 aa15.3■□□□□ 0.04
LMNB1-203ENST00000460265 HOXA2O43364 376 aa15.29■□□□□ 0.04
LMNB1-203ENST00000460265 SNRPB2P08579 225 aaKnown RBP15.29■□□□□ 0.04
LMNB1-203ENST00000460265 HSPA8P11142 646 aaKnown RBP15.29■□□□□ 0.04
LMNB1-203ENST00000460265 LPOP22079 712 aaPredicted RBP15.29■□□□□ 0.04
LMNB1-203ENST00000460265 SLC7A2P52569 658 aa15.29■□□□□ 0.04
LMNB1-203ENST00000460265 NADSYN1Q6IA69 706 aa15.29■□□□□ 0.04
LMNB1-203ENST00000460265 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.29■□□□□ 0.046e-6■□□□□ 8.1
LMNB1-203ENST00000460265 CAMK1DQ8IU85 385 aa15.29■□□□□ 0.04
LMNB1-203ENST00000460265 CPNE9Q8IYJ1 553 aa15.29■□□□□ 0.04
LMNB1-203ENST00000460265 LSMEM2Q8N112 164 aa15.29■□□□□ 0.04
LMNB1-203ENST00000460265 RMND5BQ96G75 393 aaPredicted RBP15.29■□□□□ 0.04
LMNB1-203ENST00000460265 ACOX2Q99424 681 aa15.29■□□□□ 0.04
LMNB1-203ENST00000460265 PKMYT1Q99640 499 aa15.29■□□□□ 0.04
LMNB1-203ENST00000460265 TMEM79Q9BSE2 394 aa15.29■□□□□ 0.04
LMNB1-203ENST00000460265 MRPL9Q9BYD2 267 aaKnown RBP15.29■□□□□ 0.04
LMNB1-203ENST00000460265 TNKS2Q9H2K2 1166 aa15.29■□□□□ 0.04
LMNB1-203ENST00000460265 EVLQ9UI08 416 aaPredicted RBP15.29■□□□□ 0.04
LMNB1-203ENST00000460265 PRAMEF11O60813 436 aa15.29■□□□□ 0.04
LMNB1-203ENST00000460265 CLASP2O75122 1294 aaKnown RBP15.29■□□□□ 0.04
LMNB1-203ENST00000460265 URODP06132 367 aa15.29■□□□□ 0.04
LMNB1-203ENST00000460265 SBK3P0C264 359 aa15.29■□□□□ 0.04
LMNB1-203ENST00000460265 PCYOX1LQ8NBM8 494 aa15.29■□□□□ 0.04
LMNB1-203ENST00000460265 HPS1Q92902 700 aa15.29■□□□□ 0.04
LMNB1-203ENST00000460265 FAR2Q96K12 515 aa15.29■□□□□ 0.04
LMNB1-203ENST00000460265 TRPV5Q9NQA5 729 aa15.29■□□□□ 0.04
LMNB1-203ENST00000460265 CRLS1Q9UJA2 301 aa15.29■□□□□ 0.04
LMNB1-203ENST00000460265 FAM155AB1AL88 458 aaPredicted RBP15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms