RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 TFB1MQ8WVM0 346 aaKnown RBP22.5■■□□□ 1.19
PTPN4-207ENST00000460162 TEKT5Q96M29 485 aa22.5■■□□□ 1.19
PTPN4-207ENST00000460162 ASPSCR1Q9BZE9 553 aa22.5■■□□□ 1.19
PTPN4-207ENST00000460162 LILRA5A6NI73 299 aa22.49■■□□□ 1.19
PTPN4-207ENST00000460162 CHUKO15111 745 aa22.49■■□□□ 1.19
PTPN4-207ENST00000460162 MTSS1O43312 755 aa22.49■■□□□ 1.19
PTPN4-207ENST00000460162 SNX2O60749 519 aa22.49■■□□□ 1.19
PTPN4-207ENST00000460162 TBX2Q13207 712 aaPredicted RBP22.49■■□□□ 1.19
PTPN4-207ENST00000460162 FAM182AQ5T1J6 154 aa22.49■■□□□ 1.19
PTPN4-207ENST00000460162 FAM129CQ86XR2 697 aa22.49■■□□□ 1.19
PTPN4-207ENST00000460162 PLEKHG4BQ96PX9 1271 aa22.49■■□□□ 1.19
PTPN4-207ENST00000460162 TEFMQ96QE5 360 aaKnown RBP22.49■■□□□ 1.19
PTPN4-207ENST00000460162 CPNE7Q9UBL6 633 aa22.49■■□□□ 1.19
PTPN4-207ENST00000460162 B3GALT1Q9Y5Z6 326 aa22.49■■□□□ 1.19
PTPN4-207ENST00000460162 EFCAB7A8K855 629 aa22.48■■□□□ 1.19
PTPN4-207ENST00000460162 B8ZZF3 427 aa22.48■■□□□ 1.19
PTPN4-207ENST00000460162 CST8O60676 142 aa22.48■■□□□ 1.19
PTPN4-207ENST00000460162 PMPCBO75439 489 aa22.48■■□□□ 1.19
PTPN4-207ENST00000460162 PECAM1P16284 738 aaPredicted RBP22.48■■□□□ 1.19
PTPN4-207ENST00000460162 BPIP17213 487 aa22.48■■□□□ 1.19
PTPN4-207ENST00000460162 UBE2IP63279 158 aaKnown RBP22.48■■□□□ 1.19
PTPN4-207ENST00000460162 DCAF12Q5T6F0 453 aa22.48■■□□□ 1.19
PTPN4-207ENST00000460162 CRTC3Q6UUV7 619 aa22.48■■□□□ 1.19
PTPN4-207ENST00000460162 SPOCD1Q6ZMY3 1216 aa22.48■■□□□ 1.19
PTPN4-207ENST00000460162 B4GALNT4Q76KP1 1039 aa22.48■■□□□ 1.19
PTPN4-207ENST00000460162 ARHGAP22Q7Z5H3 698 aa22.48■■□□□ 1.19
PTPN4-207ENST00000460162 ADGRG6Q86SQ4 1221 aa22.48■■□□□ 1.19
PTPN4-207ENST00000460162 BMPERQ8N8U9 685 aa22.48■■□□□ 1.19
PTPN4-207ENST00000460162 NKD1Q969G9 470 aa22.48■■□□□ 1.19
PTPN4-207ENST00000460162 VPS35Q96QK1 796 aa22.48■■□□□ 1.19
PTPN4-207ENST00000460162 TIMM29Q9BSF4 260 aa22.48■■□□□ 1.19
PTPN4-207ENST00000460162 OSGEPL1Q9H4B0 414 aa22.48■■□□□ 1.19
PTPN4-207ENST00000460162 ARFGAP3Q9NP61 516 aa22.48■■□□□ 1.19
PTPN4-207ENST00000460162 KLC4Q9NSK0 619 aa22.48■■□□□ 1.19
PTPN4-207ENST00000460162 OCIAD1Q9NX40 245 aa22.48■■□□□ 1.19
PTPN4-207ENST00000460162 SLC39A1Q9NY26 324 aa22.48■■□□□ 1.19
PTPN4-207ENST00000460162 VEGFDO43915 354 aa22.47■■□□□ 1.19
PTPN4-207ENST00000460162 UGT1A3P35503 534 aa22.47■■□□□ 1.19
PTPN4-207ENST00000460162 INSCQ1MX18 579 aa22.47■■□□□ 1.19
PTPN4-207ENST00000460162 TFDP3Q5H9I0 405 aa22.47■■□□□ 1.19
PTPN4-207ENST00000460162 ZNF648Q5T619 568 aaPredicted RBP22.47■■□□□ 1.19
PTPN4-207ENST00000460162 LRRTM4Q86VH4 590 aa22.47■■□□□ 1.19
PTPN4-207ENST00000460162 TRABDQ9H4I3 376 aa22.47■■□□□ 1.19
PTPN4-207ENST00000460162 UCK1Q9HA47 277 aa22.47■■□□□ 1.19
PTPN4-207ENST00000460162 PRDM8Q9NQV8 689 aa22.47■■□□□ 1.19
PTPN4-207ENST00000460162 SAE1Q9UBE0 346 aaPredicted RBP22.47■■□□□ 1.19
PTPN4-207ENST00000460162 FAM153AQ9UHL3 310 aa22.47■■□□□ 1.19
PTPN4-207ENST00000460162 SPO11Q9Y5K1 396 aa22.47■■□□□ 1.19
PTPN4-207ENST00000460162 MN1Q10571 1320 aaPredicted RBP22.47■■□□□ 1.19
PTPN4-207ENST00000460162 ZNF106Q9H2Y7 1883 aaKnown RBP22.47■■□□□ 1.19
PTPN4-207ENST00000460162 KMOO15229 486 aa22.46■■□□□ 1.19
PTPN4-207ENST00000460162 WT1P19544 449 aaPredicted RBP22.46■■□□□ 1.19
PTPN4-207ENST00000460162 NFKB1P19838 968 aa22.46■■□□□ 1.19
PTPN4-207ENST00000460162 CD68P34810 354 aaPredicted RBP22.46■■□□□ 1.19
PTPN4-207ENST00000460162 HMGCLP35914 325 aa22.46■■□□□ 1.19
PTPN4-207ENST00000460162 TNNT3P45378 269 aaPredicted RBP22.46■■□□□ 1.19
PTPN4-207ENST00000460162 WASHC5Q12768 1159 aa22.46■■□□□ 1.19
PTPN4-207ENST00000460162 LINC00303Q3SY05 128 aa22.46■■□□□ 1.19
PTPN4-207ENST00000460162 SARM1Q6SZW1 724 aa22.46■■□□□ 1.19
PTPN4-207ENST00000460162 KATNAL2Q8IYT4 538 aa22.46■■□□□ 1.19
PTPN4-207ENST00000460162 NCSTNQ92542 709 aa22.46■■□□□ 1.19
PTPN4-207ENST00000460162 P3H4Q92791 437 aa22.46■■□□□ 1.19
PTPN4-207ENST00000460162 EXTL1Q92935 676 aa22.46■■□□□ 1.19
PTPN4-207ENST00000460162 VAT1Q99536 393 aa22.46■■□□□ 1.19
PTPN4-207ENST00000460162 ARHGAP9Q9BRR9 750 aa22.46■■□□□ 1.19
PTPN4-207ENST00000460162 UBP1Q9NZI7 540 aa22.46■■□□□ 1.19
PTPN4-207ENST00000460162 hCG_1818297A0A087WSY0 165 aa22.45■■□□□ 1.18
PTPN4-207ENST00000460162 LOC285095A0A1B0GVY8 99 aa22.45■■□□□ 1.18
PTPN4-207ENST00000460162 PRR19A6NJB7 356 aa22.45■■□□□ 1.18
PTPN4-207ENST00000460162 J3QKU1 62 aa22.45■■□□□ 1.18
PTPN4-207ENST00000460162 AURKAO14965 403 aa22.45■■□□□ 1.18
PTPN4-207ENST00000460162 LCA5LO95447 670 aa22.45■■□□□ 1.18
PTPN4-207ENST00000460162 EPOP01588 193 aa22.45■■□□□ 1.18
PTPN4-207ENST00000460162 XRCC1P18887 633 aaPredicted RBP22.45■■□□□ 1.18
PTPN4-207ENST00000460162 MAGEA1P43355 309 aa22.45■■□□□ 1.18
PTPN4-207ENST00000460162 MAPK9P45984 424 aa22.45■■□□□ 1.18
PTPN4-207ENST00000460162 PLA2G4EQ3MJ16 856 aa22.45■■□□□ 1.18
PTPN4-207ENST00000460162 SNAP47Q5SQN1 464 aa22.45■■□□□ 1.18
PTPN4-207ENST00000460162 ZDHHC20Q5W0Z9 365 aa22.45■■□□□ 1.18
PTPN4-207ENST00000460162 KAZNQ674X7 775 aa22.45■■□□□ 1.18
PTPN4-207ENST00000460162 ANKS6Q68DC2 871 aa22.45■■□□□ 1.18
PTPN4-207ENST00000460162 C11orf63Q6NUN7 778 aa22.45■■□□□ 1.18
PTPN4-207ENST00000460162 KDELC1Q6UW63 502 aa22.45■■□□□ 1.18
PTPN4-207ENST00000460162 IL22RA1Q8N6P7 574 aa22.45■■□□□ 1.18
PTPN4-207ENST00000460162 TC2NQ8N9U0 490 aa22.45■■□□□ 1.18
PTPN4-207ENST00000460162 JPH3Q8WXH2 748 aaPredicted RBP22.45■■□□□ 1.18
PTPN4-207ENST00000460162 QKIQ96PU8 341 aaKnown RBP eCLIP22.45■■□□□ 1.18
PTPN4-207ENST00000460162 KLHL8Q9P2G9 620 aaPredicted RBP22.45■■□□□ 1.18
PTPN4-207ENST00000460162 ALG6Q9Y672 507 aa22.45■■□□□ 1.18
PTPN4-207ENST00000460162 TENM4Q6N022 2769 aa22.45■■□□□ 1.18
PTPN4-207ENST00000460162 BOD1L1Q8NFC6 3051 aa22.44■■□□□ 1.18
PTPN4-207ENST00000460162 A8MU76 341 aa22.44■■□□□ 1.18
PTPN4-207ENST00000460162 RAD1O60671 282 aa22.44■■□□□ 1.18
PTPN4-207ENST00000460162 ANKRD34CP0C6C1 535 aa22.44■■□□□ 1.18
PTPN4-207ENST00000460162 ZNF7P17097 686 aaPredicted RBP22.44■■□□□ 1.18
PTPN4-207ENST00000460162 WNT3AP56704 352 aa22.44■■□□□ 1.18
PTPN4-207ENST00000460162 MC2RQ01718 297 aa22.44■■□□□ 1.18
PTPN4-207ENST00000460162 CEACAM20Q6UY09 585 aa22.44■■□□□ 1.18
PTPN4-207ENST00000460162 PLXDC1Q8IUK5 500 aa22.44■■□□□ 1.18
PTPN4-207ENST00000460162 CACNA2D3Q8IZS8 1091 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms