RNA–Protein interactions for RNA: ENST00000459909.1

TMEM50B-205, Transcript of transmembrane protein 50B, humanhuman

TSL 2

Gene TMEM50B, Length 618 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-205ENST00000459909 ACTR1AP61163 376 aa16.48■□□□□ 0.23
TMEM50B-205ENST00000459909 POLR2LP62875 67 aaKnown RBP16.48■□□□□ 0.23
TMEM50B-205ENST00000459909 DPYSQ14117 519 aa16.48■□□□□ 0.23
TMEM50B-205ENST00000459909 ACOX1Q15067 660 aa16.48■□□□□ 0.23
TMEM50B-205ENST00000459909 PARP15Q460N3 678 aa16.48■□□□□ 0.23
TMEM50B-205ENST00000459909 ZNF569Q5MCW4 686 aa16.48■□□□□ 0.23
TMEM50B-205ENST00000459909 APLFQ8IW19 511 aaPredicted RBP16.48■□□□□ 0.23
TMEM50B-205ENST00000459909 KATNAL2Q8IYT4 538 aa16.48■□□□□ 0.23
TMEM50B-205ENST00000459909 C17orf53Q8N3J3 647 aaPredicted RBP16.48■□□□□ 0.23
TMEM50B-205ENST00000459909 FAM71BQ8TC56 605 aa16.48■□□□□ 0.23
TMEM50B-205ENST00000459909 ECHDC3Q96DC8 303 aa16.48■□□□□ 0.23
TMEM50B-205ENST00000459909 RBM41Q96IZ5 413 aaKnown RBP16.48■□□□□ 0.23
TMEM50B-205ENST00000459909 MAK16Q9BXY0 300 aaKnown RBP16.48■□□□□ 0.23
TMEM50B-205ENST00000459909 KCTD5Q9NXV2 234 aa16.48■□□□□ 0.23
TMEM50B-205ENST00000459909 DONSONQ9NYP3 566 aa16.48■□□□□ 0.23
TMEM50B-205ENST00000459909 OAS3Q9Y6K5 1087 aaKnown RBP16.48■□□□□ 0.23
TMEM50B-205ENST00000459909 ABCA12Q86UK0 2595 aa16.48■□□□□ 0.23
TMEM50B-205ENST00000459909 LRBAP50851 2863 aa16.47■□□□□ 0.23
TMEM50B-205ENST00000459909 WIPF3A6NGB9 483 aa16.47■□□□□ 0.23
TMEM50B-205ENST00000459909 WASH4PA8MWX3 477 aa16.47■□□□□ 0.23
TMEM50B-205ENST00000459909 CSNK1DP48730 415 aa16.47■□□□□ 0.23
TMEM50B-205ENST00000459909 RPS6KA1Q15418 735 aa16.47■□□□□ 0.23
TMEM50B-205ENST00000459909 ANKRD20A8PQ5CZ79 823 aa16.47■□□□□ 0.23
TMEM50B-205ENST00000459909 TMCO3Q6UWJ1 677 aa16.47■□□□□ 0.23
TMEM50B-205ENST00000459909 ZNF761Q86XN6 746 aaPredicted RBP16.47■□□□□ 0.23
TMEM50B-205ENST00000459909 RCOR2Q8IZ40 523 aa16.47■□□□□ 0.23
TMEM50B-205ENST00000459909 EXD1Q8NHP7 514 aa16.47■□□□□ 0.23
TMEM50B-205ENST00000459909 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.47■□□□□ 0.23
TMEM50B-205ENST00000459909 NUS1Q96E22 293 aa16.47■□□□□ 0.23
TMEM50B-205ENST00000459909 KCND3Q9UK17 655 aa16.47■□□□□ 0.23
TMEM50B-205ENST00000459909 CROTQ9UKG9 612 aa16.47■□□□□ 0.23
TMEM50B-205ENST00000459909 CELSR2Q9HCU4 2923 aa16.47■□□□□ 0.23
TMEM50B-205ENST00000459909 CENPEQ02224 2701 aa16.47■□□□□ 0.23
TMEM50B-205ENST00000459909 CDC14CA4D256 554 aa16.46■□□□□ 0.23
TMEM50B-205ENST00000459909 C3orf70A6NLC5 250 aaPredicted RBP16.46■□□□□ 0.23
TMEM50B-205ENST00000459909 SORBS2O94875 1100 aaKnown RBP16.46■□□□□ 0.23
TMEM50B-205ENST00000459909 RECKO95980 971 aa16.46■□□□□ 0.23
TMEM50B-205ENST00000459909 IVLP07476 585 aa16.46■□□□□ 0.23
TMEM50B-205ENST00000459909 CETN2P41208 172 aa16.46■□□□□ 0.23
TMEM50B-205ENST00000459909 CDK3Q00526 305 aa16.46■□□□□ 0.23
TMEM50B-205ENST00000459909 LLGL1Q15334 1064 aa16.46■□□□□ 0.23
TMEM50B-205ENST00000459909 EIF2S3LQ2VIR3 472 aaKnown RBP16.46■□□□□ 0.23
TMEM50B-205ENST00000459909 MEI1Q5TIA1 1274 aa16.46■□□□□ 0.23
TMEM50B-205ENST00000459909 KAZNQ674X7 775 aa16.46■□□□□ 0.23
TMEM50B-205ENST00000459909 C6orf15Q6UXA7 325 aaPredicted RBP16.46■□□□□ 0.23
TMEM50B-205ENST00000459909 MFSD7Q6UXD7 560 aa16.46■□□□□ 0.23
TMEM50B-205ENST00000459909 SPOCD1Q6ZMY3 1216 aa16.46■□□□□ 0.23
TMEM50B-205ENST00000459909 SRLQ86TD4 932 aa16.46■□□□□ 0.23
TMEM50B-205ENST00000459909 RFX6Q8HWS3 928 aa16.46■□□□□ 0.23
TMEM50B-205ENST00000459909 SLC35F6Q8N357 371 aa16.46■□□□□ 0.23
TMEM50B-205ENST00000459909 PTCD2Q8WV60 388 aaKnown RBP16.46■□□□□ 0.23
TMEM50B-205ENST00000459909 UBE2Q2Q8WVN8 375 aa16.46■□□□□ 0.23
TMEM50B-205ENST00000459909 ALG3Q92685 438 aa16.46■□□□□ 0.23
TMEM50B-205ENST00000459909 HES6Q96HZ4 224 aa16.46■□□□□ 0.23
TMEM50B-205ENST00000459909 COQ10AQ96MF6 247 aa16.46■□□□□ 0.23
TMEM50B-205ENST00000459909 ULBP3Q9BZM4 244 aa16.46■□□□□ 0.23
TMEM50B-205ENST00000459909 SLC17A4Q9Y2C5 497 aa16.46■□□□□ 0.23
TMEM50B-205ENST00000459909 A8MX80 341 aa16.45■□□□□ 0.22
TMEM50B-205ENST00000459909 DDX3YO15523 660 aaKnown RBP16.45■□□□□ 0.22
TMEM50B-205ENST00000459909 IL4RP24394 825 aa16.45■□□□□ 0.22
TMEM50B-205ENST00000459909 BCL2L1Q07817 233 aa16.45■□□□□ 0.22
TMEM50B-205ENST00000459909 SEMA5AQ13591 1074 aa16.45■□□□□ 0.22
TMEM50B-205ENST00000459909 NADK2Q4G0N4 442 aa16.45■□□□□ 0.22
TMEM50B-205ENST00000459909 TFDP3Q5H9I0 405 aa16.45■□□□□ 0.22
TMEM50B-205ENST00000459909 LYSMD3Q7Z3D4 306 aa16.45■□□□□ 0.22
TMEM50B-205ENST00000459909 TMEM135Q86UB9 458 aa16.45■□□□□ 0.22
TMEM50B-205ENST00000459909 SRRM1Q8IYB3 904 aaKnown RBP16.45■□□□□ 0.22
TMEM50B-205ENST00000459909 UMODL1-AS1Q8N2C9 162 aa16.45■□□□□ 0.22
TMEM50B-205ENST00000459909 SFRP1Q8N474 314 aa16.45■□□□□ 0.22
TMEM50B-205ENST00000459909 PAF1Q8N7H5 531 aa16.45■□□□□ 0.22
TMEM50B-205ENST00000459909 SLC37A2Q8TED4 501 aa16.45■□□□□ 0.22
TMEM50B-205ENST00000459909 NCSTNQ92542 709 aa16.45■□□□□ 0.22
TMEM50B-205ENST00000459909 FAF2Q96CS3 445 aa16.45■□□□□ 0.22
TMEM50B-205ENST00000459909 CELF6Q96J87 481 aaKnown RBP16.45■□□□□ 0.22
TMEM50B-205ENST00000459909 RNF157Q96PX1 679 aa16.45■□□□□ 0.22
TMEM50B-205ENST00000459909 TWSG1Q9GZX9 223 aa16.45■□□□□ 0.22
TMEM50B-205ENST00000459909 PDFQ9HBH1 243 aa16.45■□□□□ 0.22
TMEM50B-205ENST00000459909 ETNK2Q9NVF9 386 aa16.45■□□□□ 0.22
TMEM50B-205ENST00000459909 ZKSCAN5Q9Y2L8 839 aa16.45■□□□□ 0.22
TMEM50B-205ENST00000459909 RP1L1Q8IWN7 2480 aaPredicted RBP16.45■□□□□ 0.22
TMEM50B-205ENST00000459909 FBN2P35556 2912 aa16.44■□□□□ 0.22
TMEM50B-205ENST00000459909 ZNF487B1APH4 448 aa16.44■□□□□ 0.22
TMEM50B-205ENST00000459909 TCP11X1B4DZS4 312 aa16.44■□□□□ 0.22
TMEM50B-205ENST00000459909 APOL1O14791 398 aa16.44■□□□□ 0.22
TMEM50B-205ENST00000459909 KATNA1O75449 491 aa16.44■□□□□ 0.22
TMEM50B-205ENST00000459909 CREG1O75629 220 aa16.44■□□□□ 0.22
TMEM50B-205ENST00000459909 TEAD1P28347 426 aa16.44■□□□□ 0.22
TMEM50B-205ENST00000459909 SERPINB6P35237 376 aa16.44■□□□□ 0.22
TMEM50B-205ENST00000459909 CDKN2BP42772 138 aa16.44■□□□□ 0.22
TMEM50B-205ENST00000459909 POLD2P49005 469 aa16.44■□□□□ 0.22
TMEM50B-205ENST00000459909 PGDP52209 483 aa16.44■□□□□ 0.22
TMEM50B-205ENST00000459909 GNG11P61952 73 aa16.44■□□□□ 0.22
TMEM50B-205ENST00000459909 DYNLT1P63172 113 aa16.44■□□□□ 0.22
TMEM50B-205ENST00000459909 INPP5JQ15735 1006 aaPredicted RBP16.44■□□□□ 0.22
TMEM50B-205ENST00000459909 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.44■□□□□ 0.22
TMEM50B-205ENST00000459909 C1QL3Q5VWW1 255 aa16.44■□□□□ 0.22
TMEM50B-205ENST00000459909 VSIG1Q86XK7 387 aa16.44■□□□□ 0.22
TMEM50B-205ENST00000459909 LZTR1Q8N653 840 aa16.44■□□□□ 0.22
TMEM50B-205ENST00000459909 NPWQ8N729 165 aa16.44■□□□□ 0.22
TMEM50B-205ENST00000459909 PRR7Q8TB68 274 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms