RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 MYCLP1P12525 358 aaPredicted RBP19.54■□□□□ 0.72
SNX27-204ENST00000458013 IGFALSP35858 605 aa19.54■□□□□ 0.72
SNX27-204ENST00000458013 ZNF366Q8N895 744 aa19.54■□□□□ 0.72
SNX27-204ENST00000458013 AP2M1Q96CW1 435 aa19.54■□□□□ 0.72
SNX27-204ENST00000458013 SLC9A9Q8IVB4 645 aa19.54■□□□□ 0.72
SNX27-204ENST00000458013 EIF1ADQ8N9N8 165 aaKnown RBP19.54■□□□□ 0.72
SNX27-204ENST00000458013 FBXO15Q8NCQ5 510 aaPredicted RBP19.54■□□□□ 0.72
SNX27-204ENST00000458013 ZMIZ2Q8NF64 920 aa19.54■□□□□ 0.72
SNX27-204ENST00000458013 RAI2Q9Y5P3 530 aa19.54■□□□□ 0.72
SNX27-204ENST00000458013 UBIAD1Q9Y5Z9 338 aa19.54■□□□□ 0.72
SNX27-204ENST00000458013 RNASEH2AO75792 299 aaKnown RBP19.53■□□□□ 0.72
SNX27-204ENST00000458013 SMCO1Q147U7 214 aa19.53■□□□□ 0.72
SNX27-204ENST00000458013 CEP68Q76N32 757 aa19.53■□□□□ 0.72
SNX27-204ENST00000458013 CHST9Q7L1S5 443 aa19.53■□□□□ 0.72
SNX27-204ENST00000458013 SATL1Q86VE3 508 aa19.53■□□□□ 0.72
SNX27-204ENST00000458013 AP3S1Q92572 193 aa19.53■□□□□ 0.72
SNX27-204ENST00000458013 C11orf24Q96F05 449 aaPredicted RBP19.53■□□□□ 0.72
SNX27-204ENST00000458013 KREMEN1Q96MU8 473 aa19.53■□□□□ 0.72
SNX27-204ENST00000458013 COPS8Q99627 209 aa19.53■□□□□ 0.72
SNX27-204ENST00000458013 AGXT2Q9BYV1 514 aa19.53■□□□□ 0.72
SNX27-204ENST00000458013 PHF24Q9UPV7 400 aa19.53■□□□□ 0.72
SNX27-204ENST00000458013 CSH1P0DML2 217 aa19.53■□□□□ 0.72
SNX27-204ENST00000458013 CSH2P0DML3 217 aa19.53■□□□□ 0.72
SNX27-204ENST00000458013 PRKAR2AP13861 404 aaKnown RBP19.53■□□□□ 0.72
SNX27-204ENST00000458013 TCF4P15884 667 aa19.53■□□□□ 0.72
SNX27-204ENST00000458013 DDR1Q08345 913 aa19.53■□□□□ 0.72
SNX27-204ENST00000458013 HKDC1Q2TB90 917 aa19.53■□□□□ 0.72
SNX27-204ENST00000458013 ATAD1Q8NBU5 361 aa19.53■□□□□ 0.72
SNX27-204ENST00000458013 HMCESQ96FZ2 354 aa19.53■□□□□ 0.72
SNX27-204ENST00000458013 STOML2Q9UJZ1 356 aa19.53■□□□□ 0.72
SNX27-204ENST00000458013 DMTF1Q9Y222 760 aa19.53■□□□□ 0.72
SNX27-204ENST00000458013 RPP40O75818 363 aaKnown RBP19.53■□□□□ 0.72
SNX27-204ENST00000458013 RPLP2P05387 115 aaKnown RBP19.53■□□□□ 0.72
SNX27-204ENST00000458013 RPL5P46777 297 aaKnown RBP19.53■□□□□ 0.72
SNX27-204ENST00000458013 ARSHQ5FYA8 562 aa19.53■□□□□ 0.72
SNX27-204ENST00000458013 RALGPS1Q5JS13 557 aa19.53■□□□□ 0.72
SNX27-204ENST00000458013 UBR7Q8N806 425 aa19.53■□□□□ 0.72
SNX27-204ENST00000458013 GAL3ST4Q96RP7 486 aa19.53■□□□□ 0.72
SNX27-204ENST00000458013 CHCHD6Q9BRQ6 235 aa19.53■□□□□ 0.72
SNX27-204ENST00000458013 CHMP1AQ9HD42 196 aaPredicted RBP19.53■□□□□ 0.72
SNX27-204ENST00000458013 ATXN1P54253 815 aaKnown RBP19.53■□□□□ 0.72
SNX27-204ENST00000458013 EGFLAMQ63HQ2 1017 aa19.53■□□□□ 0.72
SNX27-204ENST00000458013 VSIG10LQ86VR7 867 aa19.53■□□□□ 0.72
SNX27-204ENST00000458013 NRSN1Q8IZ57 195 aa19.53■□□□□ 0.72
SNX27-204ENST00000458013 MAML3Q96JK9 1138 aa19.53■□□□□ 0.72
SNX27-204ENST00000458013 TBC1D17Q9HA65 648 aa19.53■□□□□ 0.72
SNX27-204ENST00000458013 TNFRSF11BO00300 401 aa19.53■□□□□ 0.72
SNX27-204ENST00000458013 INMTO95050 263 aa19.53■□□□□ 0.72
SNX27-204ENST00000458013 CST3P01034 146 aaPredicted RBP19.53■□□□□ 0.72
SNX27-204ENST00000458013 ABHD2P08910 425 aa19.53■□□□□ 0.72
SNX27-204ENST00000458013 GNALP38405 381 aa19.53■□□□□ 0.72
SNX27-204ENST00000458013 OR14C36Q8NHC7 312 aa19.53■□□□□ 0.72
SNX27-204ENST00000458013 FAM105AQ9NUU6 356 aa19.53■□□□□ 0.72
SNX27-204ENST00000458013 NDRG2Q9UN36 371 aaKnown RBP19.53■□□□□ 0.72
SNX27-204ENST00000458013 CACNB4O00305 520 aaPredicted RBP19.52■□□□□ 0.72
SNX27-204ENST00000458013 LSM1O15116 133 aaKnown RBP19.52■□□□□ 0.72
SNX27-204ENST00000458013 CDH5P33151 784 aaPredicted RBP19.52■□□□□ 0.72
SNX27-204ENST00000458013 PRKCIP41743 596 aa19.52■□□□□ 0.72
SNX27-204ENST00000458013 CASP7P55210 303 aa19.52■□□□□ 0.72
SNX27-204ENST00000458013 DCLRE1AQ6PJP8 1040 aa19.52■□□□□ 0.72
SNX27-204ENST00000458013 ADAMTS15Q8TE58 950 aa19.52■□□□□ 0.72
SNX27-204ENST00000458013 FATE1Q969F0 183 aa19.52■□□□□ 0.72
SNX27-204ENST00000458013 ING3Q9NXR8 418 aa19.52■□□□□ 0.72
SNX27-204ENST00000458013 SLC27A6Q9Y2P4 619 aa19.52■□□□□ 0.72
SNX27-204ENST00000458013 CCDC162PA2VCL2 907 aa19.52■□□□□ 0.72
SNX27-204ENST00000458013 MAN2A2P49641 1150 aa19.52■□□□□ 0.72
SNX27-204ENST00000458013 GTF2H2Q13888 395 aa19.52■□□□□ 0.72
SNX27-204ENST00000458013 GANABQ14697 944 aaKnown RBP19.52■□□□□ 0.72
SNX27-204ENST00000458013 UBAP2Q5T6F2 1119 aaKnown RBP19.52■□□□□ 0.72
SNX27-204ENST00000458013 GTF2H2CQ6P1K8 395 aa19.52■□□□□ 0.72
SNX27-204ENST00000458013 CHSY3Q70JA7 882 aa19.52■□□□□ 0.72
SNX27-204ENST00000458013 CERS5Q8N5B7 392 aa19.52■□□□□ 0.72
SNX27-204ENST00000458013 ZNF398Q8TD17 642 aa19.52■□□□□ 0.72
SNX27-204ENST00000458013 SMPDL3BQ92485 455 aa19.52■□□□□ 0.72
SNX27-204ENST00000458013 ACSS3Q9H6R3 686 aa19.52■□□□□ 0.72
SNX27-204ENST00000458013 GNEQ9Y223 722 aaKnown RBP19.52■□□□□ 0.72
SNX27-204ENST00000458013 KCNE2Q9Y6J6 123 aa19.52■□□□□ 0.72
SNX27-204ENST00000458013 NAE1Q13564 534 aa19.52■□□□□ 0.72
SNX27-204ENST00000458013 TRABD2AQ86V40 505 aa19.52■□□□□ 0.72
SNX27-204ENST00000458013 BSNDQ8WZ55 320 aa19.52■□□□□ 0.72
SNX27-204ENST00000458013 CCDC115Q96NT0 180 aa19.52■□□□□ 0.72
SNX27-204ENST00000458013 SIRPGQ9P1W8 387 aa19.52■□□□□ 0.72
SNX27-204ENST00000458013 REXO2Q9Y3B8 237 aaKnown RBP19.52■□□□□ 0.72
SNX27-204ENST00000458013 CLCNKBP51801 687 aa19.52■□□□□ 0.72
SNX27-204ENST00000458013 PGDP52209 483 aa19.52■□□□□ 0.72
SNX27-204ENST00000458013 AP2S1P53680 142 aaPredicted RBP19.52■□□□□ 0.72
SNX27-204ENST00000458013 COL9A2Q14055 689 aaPredicted RBP19.52■□□□□ 0.72
SNX27-204ENST00000458013 GCNT6Q5T4J0 391 aa19.52■□□□□ 0.72
SNX27-204ENST00000458013 RDH11Q8TC12 318 aa19.52■□□□□ 0.72
SNX27-204ENST00000458013 SLC4A9Q96Q91 983 aa19.52■□□□□ 0.72
SNX27-204ENST00000458013 GLOD4Q9HC38 313 aa19.52■□□□□ 0.72
SNX27-204ENST00000458013 AP3M1Q9Y2T2 418 aa19.52■□□□□ 0.72
SNX27-204ENST00000458013 SALL3Q9BXA9 1300 aa19.52■□□□□ 0.71
SNX27-204ENST00000458013 SMIM11AP58511 58 aa19.52■□□□□ 0.71
SNX27-204ENST00000458013 KLF10Q13118 480 aa19.52■□□□□ 0.71
SNX27-204ENST00000458013 GRM3Q14832 879 aa19.52■□□□□ 0.71
SNX27-204ENST00000458013 ATCAYQ86WG3 371 aa19.52■□□□□ 0.71
SNX27-204ENST00000458013 PHYKPLQ8IUZ5 450 aa19.52■□□□□ 0.71
SNX27-204ENST00000458013 AADATQ8N5Z0 425 aa19.52■□□□□ 0.71
SNX27-204ENST00000458013 RBM15BQ8NDT2 890 aaKnown RBP19.52■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms