RNA–Protein interactions for RNA: ENST00000457745.1

RIF1-208, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-208ENST00000457745 FAM124AQ86V42 546 aa8.65□□□□□ -1.02
RIF1-208ENST00000457745 VRK3Q8IV63 474 aa8.65□□□□□ -1.02
RIF1-208ENST00000457745 ADHFE1Q8IWW8 467 aa8.65□□□□□ -1.02
RIF1-208ENST00000457745 CPNE9Q8IYJ1 553 aa8.65□□□□□ -1.02
RIF1-208ENST00000457745 LILRA3Q8N6C8 439 aaPredicted RBP8.65□□□□□ -1.02
RIF1-208ENST00000457745 BEND7Q8N7W2 519 aaPredicted RBP8.65□□□□□ -1.02
RIF1-208ENST00000457745 CALML6Q8TD86 181 aa8.65□□□□□ -1.02
RIF1-208ENST00000457745 HCAR2Q8TDS4 363 aa8.65□□□□□ -1.02
RIF1-208ENST00000457745 ACMSDQ8TDX5 336 aa8.65□□□□□ -1.02
RIF1-208ENST00000457745 FOXJ1Q92949 421 aa8.65□□□□□ -1.02
RIF1-208ENST00000457745 MRGPRX1Q96LB2 322 aa8.65□□□□□ -1.02
RIF1-208ENST00000457745 UBXN10Q96LJ8 280 aa8.65□□□□□ -1.02
RIF1-208ENST00000457745 PRR14Q9BWN1 585 aa8.65□□□□□ -1.02
RIF1-208ENST00000457745 STMN4Q9H169 189 aaPredicted RBP8.65□□□□□ -1.02
RIF1-208ENST00000457745 CCDC134Q9H6E4 229 aa8.65□□□□□ -1.02
RIF1-208ENST00000457745 CNOT10Q9H9A5 744 aaKnown RBP8.65□□□□□ -1.02
RIF1-208ENST00000457745 FZD3Q9NPG1 666 aa8.65□□□□□ -1.02
RIF1-208ENST00000457745 INTS10Q9NVR2 710 aaKnown RBP8.65□□□□□ -1.02
RIF1-208ENST00000457745 NSMCE4AQ9NXX6 385 aa8.65□□□□□ -1.02
RIF1-208ENST00000457745 SENP1Q9P0U3 644 aa8.65□□□□□ -1.02
RIF1-208ENST00000457745 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.65□□□□□ -1.02
RIF1-208ENST00000457745 CPSF2Q9P2I0 782 aaKnown RBP8.65□□□□□ -1.02
RIF1-208ENST00000457745 TXNDC16Q9P2K2 825 aa8.65□□□□□ -1.02
RIF1-208ENST00000457745 NFKBIL1Q9UBC1 381 aaPredicted RBP8.65□□□□□ -1.02
RIF1-208ENST00000457745 SMG5Q9UPR3 1016 aaKnown RBP8.65□□□□□ -1.02
RIF1-208ENST00000457745 RUVBL2Q9Y230 463 aaKnown RBP8.65□□□□□ -1.02
RIF1-208ENST00000457745 FAM50BQ9Y247 325 aa8.65□□□□□ -1.02
RIF1-208ENST00000457745 VWA7Q9Y334 891 aa8.65□□□□□ -1.02
RIF1-208ENST00000457745 SLCO1B1Q9Y6L6 691 aa8.65□□□□□ -1.02
RIF1-208ENST00000457745 ANKRD12Q6UB98 2062 aa8.65□□□□□ -1.03
RIF1-208ENST00000457745 PRR23AA6NEV1 266 aa8.64□□□□□ -1.03
RIF1-208ENST00000457745 TCP11X1B4DZS4 312 aa8.64□□□□□ -1.03
RIF1-208ENST00000457745 DLX3O60479 287 aa8.64□□□□□ -1.03
RIF1-208ENST00000457745 GLRA3O75311 464 aa8.64□□□□□ -1.03
RIF1-208ENST00000457745 NDUFS3O75489 264 aa8.64□□□□□ -1.03
RIF1-208ENST00000457745 RHOBTB1O94844 696 aa8.64□□□□□ -1.03
RIF1-208ENST00000457745 PDGFBP01127 241 aaPredicted RBP8.64□□□□□ -1.03
RIF1-208ENST00000457745 BPGMP07738 259 aa8.64□□□□□ -1.03
RIF1-208ENST00000457745 ELFN1P0C7U0 828 aa8.64□□□□□ -1.03
RIF1-208ENST00000457745 CD1DP15813 335 aa8.64□□□□□ -1.03
RIF1-208ENST00000457745 STMN1P16949 149 aa8.64□□□□□ -1.03
RIF1-208ENST00000457745 ZNF37AP17032 561 aaPredicted RBP8.64□□□□□ -1.03
RIF1-208ENST00000457745 ZNF30P17039 623 aa8.64□□□□□ -1.03
RIF1-208ENST00000457745 ITGALP20701 1170 aa8.64□□□□□ -1.03
RIF1-208ENST00000457745 DRD1P21728 446 aa8.64□□□□□ -1.03
RIF1-208ENST00000457745 HK3P52790 923 aa8.64□□□□□ -1.03
RIF1-208ENST00000457745 DCDC1P59894 354 aa8.64□□□□□ -1.03
RIF1-208ENST00000457745 POU4F1Q01851 419 aa8.64□□□□□ -1.03
RIF1-208ENST00000457745 CREB5Q02930 508 aa8.64□□□□□ -1.03
RIF1-208ENST00000457745 GRSF1Q12849 480 aaKnown RBP eCLIP8.64□□□□□ -1.03
RIF1-208ENST00000457745 DNAJC3Q13217 504 aa8.64□□□□□ -1.03
RIF1-208ENST00000457745 LAMB3Q13751 1172 aa8.64□□□□□ -1.03
RIF1-208ENST00000457745 ARHGEF7Q14155 803 aa8.64□□□□□ -1.03
RIF1-208ENST00000457745 WSCD2Q2TBF2 565 aa8.64□□□□□ -1.03
RIF1-208ENST00000457745 HSF5Q4G112 596 aaPredicted RBP8.64□□□□□ -1.03
RIF1-208ENST00000457745 ZNF658BQ4V348 819 aaPredicted RBP8.64□□□□□ -1.03
RIF1-208ENST00000457745 ACSBG2Q5FVE4 666 aa8.64□□□□□ -1.03
RIF1-208ENST00000457745 FBXO48Q5FWF7 155 aa8.64□□□□□ -1.03
RIF1-208ENST00000457745 LRRC8EQ6NSJ5 796 aa8.64□□□□□ -1.03
RIF1-208ENST00000457745 FAM45BPQ6NSW5 357 aa8.64□□□□□ -1.03
RIF1-208ENST00000457745 MRNIPQ6NTE8 343 aa8.64□□□□□ -1.03
RIF1-208ENST00000457745 FAM47EQ6ZV65 393 aa8.64□□□□□ -1.03
RIF1-208ENST00000457745 PIWIL4Q7Z3Z4 852 aaKnown RBP8.64□□□□□ -1.03
RIF1-208ENST00000457745 TMPRSS6Q8IU80 811 aa8.64□□□□□ -1.03
RIF1-208ENST00000457745 C10orf107Q8IVU9 208 aa8.64□□□□□ -1.03
RIF1-208ENST00000457745 SUGP1Q8IWZ8 645 aaKnown RBP8.64□□□□□ -1.03
RIF1-208ENST00000457745 FSTL5Q8N475 847 aaPredicted RBP8.64□□□□□ -1.03
RIF1-208ENST00000457745 ARFGAP2Q8N6H7 521 aa8.64□□□□□ -1.03
RIF1-208ENST00000457745 RASGEF1AQ8N9B8 481 aa8.64□□□□□ -1.03
RIF1-208ENST00000457745 OR6Y1Q8NGX8 325 aa8.64□□□□□ -1.03
RIF1-208ENST00000457745 FAM45AQ8TCE6 357 aa8.64□□□□□ -1.03
RIF1-208ENST00000457745 CENPTQ96BT3 561 aa8.64□□□□□ -1.03
RIF1-208ENST00000457745 AP2M1Q96CW1 435 aa8.64□□□□□ -1.03
RIF1-208ENST00000457745 THOC1Q96FV9 657 aaKnown RBP8.64□□□□□ -1.03
RIF1-208ENST00000457745 PLEKHG4BQ96PX9 1271 aa8.64□□□□□ -1.03
RIF1-208ENST00000457745 LGR4Q9BXB1 951 aa8.64□□□□□ -1.03
RIF1-208ENST00000457745 SPATA16Q9BXB7 569 aa8.64□□□□□ -1.03
RIF1-208ENST00000457745 FAM107BQ9H098 131 aa8.64□□□□□ -1.03
RIF1-208ENST00000457745 FAM83DQ9H4H8 585 aa8.64□□□□□ -1.03
RIF1-208ENST00000457745 EBF2Q9HAK2 575 aa8.64□□□□□ -1.03
RIF1-208ENST00000457745 ARHGEF3Q9NR81 526 aa8.64□□□□□ -1.03
RIF1-208ENST00000457745 FGFR1OP2Q9NVK5 253 aa8.64□□□□□ -1.03
RIF1-208ENST00000457745 ZDHHC3Q9NYG2 299 aa8.64□□□□□ -1.03
RIF1-208ENST00000457745 XPR1Q9UBH6 696 aa8.64□□□□□ -1.03
RIF1-208ENST00000457745 GULP1Q9UBP9 304 aa8.64□□□□□ -1.03
RIF1-208ENST00000457745 CRLS1Q9UJA2 301 aa8.64□□□□□ -1.03
RIF1-208ENST00000457745 MMP17Q9ULZ9 603 aa8.64□□□□□ -1.03
RIF1-208ENST00000457745 SLC8A2Q9UPR5 921 aa8.64□□□□□ -1.03
RIF1-208ENST00000457745 ASB1Q9Y576 335 aa8.64□□□□□ -1.03
RIF1-208ENST00000457745 SLC30A1Q9Y6M5 507 aa8.64□□□□□ -1.03
RIF1-208ENST00000457745 TCRBV21S2A2A0A5A6 115 aa8.63□□□□□ -1.03
RIF1-208ENST00000457745 NPEPPSL1A6NEC2 478 aa8.63□□□□□ -1.03
RIF1-208ENST00000457745 C1QTNF3-AMACRE9PGA6 284 aa8.63□□□□□ -1.03
RIF1-208ENST00000457745 WNT9AO14904 365 aa8.63□□□□□ -1.03
RIF1-208ENST00000457745 RRP9O43818 475 aaKnown RBP8.63□□□□□ -1.03
RIF1-208ENST00000457745 LILRB5O75023 590 aa8.63□□□□□ -1.03
RIF1-208ENST00000457745 RNASEH2AO75792 299 aaKnown RBP8.63□□□□□ -1.03
RIF1-208ENST00000457745 KLHL2O95198 593 aa8.63□□□□□ -1.03
RIF1-208ENST00000457745 ZWINTO95229 277 aa8.63□□□□□ -1.03
RIF1-208ENST00000457745 FUCA1P04066 466 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms