RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 TRIM38O00635 465 aa9.95□□□□□ -0.82
ATG4A-206ENST00000457035 CHUKO15111 745 aa9.95□□□□□ -0.82
ATG4A-206ENST00000457035 FLRT2O43155 660 aa9.95□□□□□ -0.82
ATG4A-206ENST00000457035 GPR39O43194 453 aa9.95□□□□□ -0.82
ATG4A-206ENST00000457035 AQP9O43315 295 aa9.95□□□□□ -0.82
ATG4A-206ENST00000457035 RAD51CO43502 376 aa9.95□□□□□ -0.82
ATG4A-206ENST00000457035 NUAK1O60285 661 aa9.95□□□□□ -0.82
ATG4A-206ENST00000457035 CSRP1P21291 193 aaKnown RBP9.95□□□□□ -0.82
ATG4A-206ENST00000457035 MGAT1P26572 445 aa9.95□□□□□ -0.82
ATG4A-206ENST00000457035 CRADDP78560 199 aa9.95□□□□□ -0.82
ATG4A-206ENST00000457035 CKAP4Q07065 602 aaKnown RBP9.95□□□□□ -0.82
ATG4A-206ENST00000457035 TMEM115Q12893 351 aaPredicted RBP9.95□□□□□ -0.82
ATG4A-206ENST00000457035 NFATC2Q13469 925 aa9.95□□□□□ -0.82
ATG4A-206ENST00000457035 C1orf61Q13536 156 aa9.95□□□□□ -0.82
ATG4A-206ENST00000457035 ITGA9Q13797 1035 aa9.95□□□□□ -0.82
ATG4A-206ENST00000457035 SEPT6Q14141 434 aa9.95□□□□□ -0.82
ATG4A-206ENST00000457035 WHAMMP3Q1A5X7 153 aa9.95□□□□□ -0.82
ATG4A-206ENST00000457035 PYCR3Q53H96 274 aa9.95□□□□□ -0.82
ATG4A-206ENST00000457035 PRRT3Q5FWE3 981 aa9.95□□□□□ -0.82
ATG4A-206ENST00000457035 NLRP9Q7RTR0 991 aa9.95□□□□□ -0.82
ATG4A-206ENST00000457035 MAATS1Q7Z4T9 603 aa9.95□□□□□ -0.82
ATG4A-206ENST00000457035 PCGF5Q86SE9 256 aa9.95□□□□□ -0.82
ATG4A-206ENST00000457035 ADGRG6Q86SQ4 1221 aa9.95□□□□□ -0.82
ATG4A-206ENST00000457035 AGGF1Q8N302 714 aaeCLIP9.95□□□□□ -0.823e-7■■■■□ 19.7
ATG4A-206ENST00000457035 MPP5Q8N3R9 675 aa9.95□□□□□ -0.82
ATG4A-206ENST00000457035 ZNF548Q8NEK5 533 aaPredicted RBP9.95□□□□□ -0.82
ATG4A-206ENST00000457035 BAHD1Q8TBE0 780 aaPredicted RBP9.95□□□□□ -0.82
ATG4A-206ENST00000457035 LMX1AQ8TE12 382 aa9.95□□□□□ -0.82
ATG4A-206ENST00000457035 RHBDD1Q8TEB9 315 aa9.95□□□□□ -0.82
ATG4A-206ENST00000457035 SETD7Q8WTS6 366 aaKnown RBP9.95□□□□□ -0.82
ATG4A-206ENST00000457035 PEX13Q92968 403 aa9.95□□□□□ -0.82
ATG4A-206ENST00000457035 SIGLEC10Q96LC7 697 aa9.95□□□□□ -0.82
ATG4A-206ENST00000457035 SERPINB12Q96P63 405 aa9.95□□□□□ -0.82
ATG4A-206ENST00000457035 LRRC61Q9BV99 259 aa9.95□□□□□ -0.82
ATG4A-206ENST00000457035 KIFC1Q9BW19 673 aa9.95□□□□□ -0.82
ATG4A-206ENST00000457035 TMEM168Q9H0V1 697 aa9.95□□□□□ -0.82
ATG4A-206ENST00000457035 ASB8Q9H765 288 aa9.95□□□□□ -0.82
ATG4A-206ENST00000457035 XAB2Q9HCS7 855 aaKnown RBP9.95□□□□□ -0.82
ATG4A-206ENST00000457035 ARFGAP3Q9NP61 516 aa9.95□□□□□ -0.82
ATG4A-206ENST00000457035 TREX1Q9NSU2 369 aa9.95□□□□□ -0.82
ATG4A-206ENST00000457035 SMOXQ9NWM0 555 aa9.95□□□□□ -0.82
ATG4A-206ENST00000457035 TRNAU1APQ9NX07 287 aaKnown RBP9.95□□□□□ -0.82
ATG4A-206ENST00000457035 VPS18Q9P253 973 aa9.95□□□□□ -0.82
ATG4A-206ENST00000457035 ATXN10Q9UBB4 475 aa9.95□□□□□ -0.82
ATG4A-206ENST00000457035 SPASTQ9UBP0 616 aa9.95□□□□□ -0.82
ATG4A-206ENST00000457035 APOBEC3BQ9UH17 382 aaKnown RBP9.95□□□□□ -0.82
ATG4A-206ENST00000457035 ANGPTL2Q9UKU9 493 aa9.95□□□□□ -0.82
ATG4A-206ENST00000457035 PCOLCE2Q9UKZ9 415 aa9.95□□□□□ -0.82
ATG4A-206ENST00000457035 SUFUQ9UMX1 484 aa9.95□□□□□ -0.82
ATG4A-206ENST00000457035 ST14Q9Y5Y6 855 aa9.95□□□□□ -0.82
ATG4A-206ENST00000457035 COL5A1P20908 1838 aaPredicted RBP9.95□□□□□ -0.82
ATG4A-206ENST00000457035 ACACBO00763 2458 aa9.94□□□□□ -0.82
ATG4A-206ENST00000457035 TRBV5-4A0A0C4DH59 114 aa9.94□□□□□ -0.82
ATG4A-206ENST00000457035 CCDC162PA2VCL2 907 aa9.94□□□□□ -0.82
ATG4A-206ENST00000457035 NEMP2A6NFY4 417 aa9.94□□□□□ -0.82
ATG4A-206ENST00000457035 SDR42E2A6NKP2 422 aa9.94□□□□□ -0.82
ATG4A-206ENST00000457035 EFCAB8A8MWE9 144 aa9.94□□□□□ -0.82
ATG4A-206ENST00000457035 LMO7DNF2Z398 122 aa9.94□□□□□ -0.82
ATG4A-206ENST00000457035 GOLGA8MH3BSY2 632 aa9.94□□□□□ -0.82
ATG4A-206ENST00000457035 TPP1O14773 563 aa9.94□□□□□ -0.82
ATG4A-206ENST00000457035 YY2O15391 372 aa9.94□□□□□ -0.82
ATG4A-206ENST00000457035 MTX2O75431 263 aa9.94□□□□□ -0.82
ATG4A-206ENST00000457035 SEC31AO94979 1220 aaKnown RBP9.94□□□□□ -0.82
ATG4A-206ENST00000457035 KCNK5O95279 499 aa9.94□□□□□ -0.82
ATG4A-206ENST00000457035 PRAMEF1O95521 474 aa9.94□□□□□ -0.82
ATG4A-206ENST00000457035 ASMTLO95671 621 aa9.94□□□□□ -0.82
ATG4A-206ENST00000457035 CELA2BP08218 269 aaPredicted RBP9.94□□□□□ -0.82
ATG4A-206ENST00000457035 CTSEP14091 401 aa9.94□□□□□ -0.82
ATG4A-206ENST00000457035 ZNF8P17098 575 aaPredicted RBP9.94□□□□□ -0.82
ATG4A-206ENST00000457035 NMBRP28336 390 aa9.94□□□□□ -0.82
ATG4A-206ENST00000457035 MC4RP32245 332 aa9.94□□□□□ -0.82
ATG4A-206ENST00000457035 GRK6P43250 576 aa9.94□□□□□ -0.82
ATG4A-206ENST00000457035 RPL21P46778 160 aaKnown RBP9.94□□□□□ -0.82
ATG4A-206ENST00000457035 CDKN1CP49918 316 aaPredicted RBP9.94□□□□□ -0.82
ATG4A-206ENST00000457035 GPRC6AQ5T6X5 926 aa9.94□□□□□ -0.82
ATG4A-206ENST00000457035 IZUMO3Q5VZ72 239 aa9.94□□□□□ -0.82
ATG4A-206ENST00000457035 ARMC3Q5W041 872 aa9.94□□□□□ -0.82
ATG4A-206ENST00000457035 DUPD1Q68J44 220 aa9.94□□□□□ -0.82
ATG4A-206ENST00000457035 PSAPL1Q6NUJ1 521 aa9.94□□□□□ -0.82
ATG4A-206ENST00000457035 HIBCHQ6NVY1 386 aaPredicted RBP9.94□□□□□ -0.82
ATG4A-206ENST00000457035 DOK6Q6PKX4 331 aa9.94□□□□□ -0.82
ATG4A-206ENST00000457035 LVRNQ6Q4G3 990 aa9.94□□□□□ -0.82
ATG4A-206ENST00000457035 SNX20Q7Z614 316 aa9.94□□□□□ -0.82
ATG4A-206ENST00000457035 HOOK3Q86VS8 718 aa9.94□□□□□ -0.82
ATG4A-206ENST00000457035 NRROSQ86YC3 692 aa9.94□□□□□ -0.82
ATG4A-206ENST00000457035 NAXDQ8IW45 347 aa9.94□□□□□ -0.82
ATG4A-206ENST00000457035 PIANPQ8IYJ0 282 aa9.94□□□□□ -0.82
ATG4A-206ENST00000457035 SDR16C5Q8N3Y7 309 aa9.94□□□□□ -0.82
ATG4A-206ENST00000457035 FSTL5Q8N475 847 aaPredicted RBP9.94□□□□□ -0.82
ATG4A-206ENST00000457035 EID2Q8N6I1 236 aa9.94□□□□□ -0.82
ATG4A-206ENST00000457035 DDHD1Q8NEL9 900 aa9.94□□□□□ -0.82
ATG4A-206ENST00000457035 DEFB124Q8NES8 71 aa9.94□□□□□ -0.82
ATG4A-206ENST00000457035 OR4C6Q8NH72 309 aa9.94□□□□□ -0.82
ATG4A-206ENST00000457035 CCL4L1Q8NHW4 92 aa9.94□□□□□ -0.82
ATG4A-206ENST00000457035 GPBAR1Q8TDU6 330 aa9.94□□□□□ -0.82
ATG4A-206ENST00000457035 HDAC10Q969S8 669 aa9.94□□□□□ -0.82
ATG4A-206ENST00000457035 SGSM3Q96HU1 749 aa9.94□□□□□ -0.82
ATG4A-206ENST00000457035 ERP44Q9BS26 406 aa9.94□□□□□ -0.82
ATG4A-206ENST00000457035 TRIM31Q9BZY9 425 aa9.94□□□□□ -0.82
ATG4A-206ENST00000457035 OR2AG1Q9H205 316 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms